Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3g10
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U80447-7|AAB37811.1|  518|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AL132948-46|CAD31837.2|  473|Caenorhabditis elegans Hypothetical...    29   4.6  

>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
           protein B0365.1 protein.
          Length = 1099

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = +2

Query: 287 KFKKHKGRLVSEMRELMYGYAQHRRMDIYKRLLQVELCRNIALIHEENGYDCMDVENRPR 466
           K  + +GRL + + E    + ++  M I    +  E CR++ + +E+ G D  DVE + R
Sbjct: 93  KVGQTEGRLHTFIVEPFCAHTENEEMYI---AIYSERCRDVIMFYEQGGVDIGDVEEKAR 149

Query: 467 GCAV 478
              V
Sbjct: 150 SVHV 153


>U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical
           protein T05C1.4b protein.
          Length = 1163

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 368 IYKRLLQVELCRNIALI-HEENGYDCMDVE 454
           ++KRLL ++LC +  +I H +  +DC+ ++
Sbjct: 9   LFKRLLTLQLCHHFDIIPHRDQSFDCVQMQ 38


>U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical
           protein T05C1.4a protein.
          Length = 1185

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 368 IYKRLLQVELCRNIALI-HEENGYDCMDVE 454
           ++KRLL ++LC +  +I H +  +DC+ ++
Sbjct: 9   LFKRLLTLQLCHHFDIIPHRDQSFDCVQMQ 38


>U80447-7|AAB37811.1|  518|Caenorhabditis elegans Hypothetical
           protein F55F8.7 protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 215 KENKITETPMEDENNEEPDWP 277
           KE KI++T  +DE+NE+P  P
Sbjct: 140 KEKKISKTESDDEDNEQPPEP 160


>AL132948-46|CAD31837.2|  473|Caenorhabditis elegans Hypothetical
           protein Y39B6A.27 protein.
          Length = 473

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 654 SICLYCCIWFGFTDLNMSLKVYENPSLL-GHIESLMVLLIF 535
           ++C+YCC+    T     ++    PSLL  H   L+ ++ F
Sbjct: 326 AVCIYCCLVHASTPFEAPMRPTSQPSLLISHSYPLIFIISF 366


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,369,681
Number of Sequences: 27780
Number of extensions: 345900
Number of successful extensions: 980
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)