Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3g09
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY308063-1|AAQ75554.1|  290|Caenorhabditis elegans EXC-4 protein.     141   6e-34
AL132876-18|CAD21669.2|  290|Caenorhabditis elegans Hypothetical...   141   6e-34
Z81515-5|CAB04193.2|  238|Caenorhabditis elegans Hypothetical pr...    59   3e-09
AL132948-33|CAD57708.2|  734|Caenorhabditis elegans Hypothetical...    36   0.023
AL132948-32|CAD31833.3|  731|Caenorhabditis elegans Hypothetical...    36   0.023
Z66520-6|CAA91385.1|  226|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81561-1|CAB04552.2|  550|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z70783-7|CAA94858.1|  239|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF099925-13|AAC69503.2|  287|Caenorhabditis elegans Hypothetical...    28   6.2  

>AY308063-1|AAQ75554.1|  290|Caenorhabditis elegans EXC-4 protein.
          Length = 290

 Score =  141 bits (341), Expect = 6e-34
 Identities = 92/237 (38%), Positives = 125/237 (52%), Gaps = 22/237 (9%)
 Frame = +3

Query: 111 EIAENGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDM 290
           +I  NG      P +EL +KAS ID RR GA LFCQE++M+LY L E+    ++V TV++
Sbjct: 6   QIQSNGDPQSK-PLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNV 64

Query: 291 QKPPPDFRTNFEATHPPILI--DNGLAILENEKIERHIMKSVPGGH-NLFVQDKEVASLI 461
                 F+ NF    PPI+I  +  L   +N +IE  I       +  LF +D      I
Sbjct: 65  NSEA--FKKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVPLFEKDPSAEKRI 122

Query: 462 ENLYSKLKLVL---VRKDEQKS---------AALRAH-------LGRIDGLLERRETRFL 584
           ENLY   KL L   V  D+ K          A ++ H       L  ID LL  R++R+L
Sbjct: 123 ENLYRNFKLFLRAKVEFDKGKKEPSRVEDLPAQIKVHYNRVCEQLSNIDQLLSERKSRYL 182

Query: 585 TGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTTFRALWRYMYHMYQLDAFTQSCPA 755
            G++M  +DCELMPRL HIR+ G   + F+IP  F  LW Y+   Y+  AF +SCPA
Sbjct: 183 LGNSMTEYDCELMPRLHHIRIIGLSLLGFDIPHNFTHLWAYILTAYRTAAFIESCPA 239


>AL132876-18|CAD21669.2|  290|Caenorhabditis elegans Hypothetical
           protein Y105E8A.22 protein.
          Length = 290

 Score =  141 bits (341), Expect = 6e-34
 Identities = 92/237 (38%), Positives = 125/237 (52%), Gaps = 22/237 (9%)
 Frame = +3

Query: 111 EIAENGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDM 290
           +I  NG      P +EL +KAS ID RR GA LFCQE++M+LY L E+    ++V TV++
Sbjct: 6   QIQSNGDPQSK-PLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNV 64

Query: 291 QKPPPDFRTNFEATHPPILI--DNGLAILENEKIERHIMKSVPGGH-NLFVQDKEVASLI 461
                 F+ NF    PPI+I  +  L   +N +IE  I       +  LF +D      I
Sbjct: 65  NSEA--FKKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVPLFEKDPSAEKRI 122

Query: 462 ENLYSKLKLVL---VRKDEQKS---------AALRAH-------LGRIDGLLERRETRFL 584
           ENLY   KL L   V  D+ K          A ++ H       L  ID LL  R++R+L
Sbjct: 123 ENLYRNFKLFLRAKVEFDKGKKEPSRVEDLPAQIKVHYNRVCEQLSNIDQLLSERKSRYL 182

Query: 585 TGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTTFRALWRYMYHMYQLDAFTQSCPA 755
            G++M  +DCELMPRL HIR+ G   + F+IP  F  LW Y+   Y+  AF +SCPA
Sbjct: 183 LGNSMTEYDCELMPRLHHIRIIGLSLLGFDIPHNFTHLWAYILTAYRTAAFIESCPA 239


>Z81515-5|CAB04193.2|  238|Caenorhabditis elegans Hypothetical
           protein F26H11.5 protein.
          Length = 238

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 30/87 (34%), Positives = 44/87 (50%)
 Frame = +3

Query: 495 VRKDEQKSAALRAHLGRIDGLLERRETRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFE 674
           V+  E +  A    L R+D  L  +ET+FL  D +   DC ++ RL  IRVA K   ++E
Sbjct: 116 VKDVEHRDTAFNTELLRLDKYLSEQETKFLISDDVTHIDCLVLTRLHSIRVAAKMLKNYE 175

Query: 675 IPTTFRALWRYMYHMYQLDAFTQSCPA 755
           IP     +  Y+   Y  + F  SCP+
Sbjct: 176 IPADLSHVLDYLKAGYATEMFRVSCPS 202


>AL132948-33|CAD57708.2|  734|Caenorhabditis elegans Hypothetical
           protein Y39B6A.43b protein.
          Length = 734

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +3

Query: 435 QDKEVASLIENLYSKLKLVLVRKDEQKSAALRAHLGRIDGLLERRETRF 581
           Q    ++  ENL+ +LKL L+R++ Q      A L R DGLL R E RF
Sbjct: 650 QQSTSSTSAENLH-ELKLQLIRREMQNQDRFSAVLDRADGLLARMEQRF 697


>AL132948-32|CAD31833.3|  731|Caenorhabditis elegans Hypothetical
           protein Y39B6A.43a protein.
          Length = 731

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +3

Query: 435 QDKEVASLIENLYSKLKLVLVRKDEQKSAALRAHLGRIDGLLERRETRF 581
           Q    ++  ENL+ +LKL L+R++ Q      A L R DGLL R E RF
Sbjct: 647 QQSTSSTSAENLH-ELKLQLIRREMQNQDRFSAVLDRADGLLARMEQRF 694


>Z66520-6|CAA91385.1|  226|Caenorhabditis elegans Hypothetical
           protein F49E12.8 protein.
          Length = 226

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 438 DKEVASLIENLYSKLKLVLVRKDEQKSAALRAHLGRIDGLLERRETRF 581
           D E  ++I+ L S+ KL +VR++EQ+          +  +  RRE+ F
Sbjct: 170 DDEDLTVIQQLKSRRKLSMVRQEEQEELTASMDRMNVGSVHSRRESGF 217


>Z81561-1|CAB04552.2|  550|Caenorhabditis elegans Hypothetical
           protein K03D10.3 protein.
          Length = 550

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +3

Query: 216 QEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTN 320
           + Y ++ +++  +K +   +  +D +KPP + RTN
Sbjct: 38  KRYMVEKFIINTVKKVVAVIIHIDFRKPPQEVRTN 72


>Z70783-7|CAA94858.1|  239|Caenorhabditis elegans Hypothetical
           protein ZK856.10 protein.
          Length = 239

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 147 PEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAE 251
           P ++ +I+A  I   R+G CL  Q +F D+++ AE
Sbjct: 79  PFVDEVIEAKVIGSSRQGLCLTIQ-FFEDIFVPAE 112


>AF099925-13|AAC69503.2|  287|Caenorhabditis elegans Hypothetical
           protein K01A2.1 protein.
          Length = 287

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 300 PPDFRTNFEATHPPILIDNGLAILENEKIERHIMKS 407
           P D RT F A HP + ID  +  L  E+I  + ++S
Sbjct: 147 PKDGRTLFSARHPTVTIDKRIKKLAAERIITNKIRS 182


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,891,601
Number of Sequences: 27780
Number of extensions: 381385
Number of successful extensions: 1112
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)