Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3g08
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical pr...    44   7e-05
AL021497-2|CAA16400.1|  606|Caenorhabditis elegans Hypothetical ...    41   9e-04
AL021497-3|CAA16405.1|  613|Caenorhabditis elegans Hypothetical ...    40   0.001
Z48638-6|CAA88567.1|  541|Caenorhabditis elegans Hypothetical pr...    38   0.008
U80931-7|AAB38003.2|  526|Caenorhabditis elegans Organic anion t...    36   0.024
AF152095-1|AAF73198.1|  526|Caenorhabditis elegans multispecific...    36   0.024
Z68296-1|CAA92589.2|  520|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z79602-1|CAB01888.3|  508|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z73899-7|CAA98077.1|  492|Caenorhabditis elegans Hypothetical pr...    31   0.92 
Z71186-7|CAM35835.1|  552|Caenorhabditis elegans Hypothetical pr...    31   0.92 
U29377-2|AAA68713.4|  627|Caenorhabditis elegans Hypothetical pr...    31   0.92 
U29377-1|AAZ94294.1|  773|Caenorhabditis elegans Hypothetical pr...    31   0.92 
AL021497-13|CAA16411.2|  550|Caenorhabditis elegans Hypothetical...    30   1.2  
Z48543-2|CAA88433.2|  478|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z72502-4|CAA96589.1|  750|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U00031-5|AAP68960.1|  534|Caenorhabditis elegans Hypothetical pr...    29   3.7  

>Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical
           protein M01F1.5 protein.
          Length = 604

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
 Frame = +2

Query: 194 SAWEISLLGSLPNFGALLASPFCGLAFNILGRKYATIFFGLPYVITWTIISLTDNVILVL 373
           S W+  ++   P   A+  S   G   + LGRK   I   + + I   I +     I++L
Sbjct: 67  SVWQEIIVSITPGVAAI-GSLCSGPGSDFLGRKKIIIGASVTFTIGAIICAAAWTKIILL 125

Query: 374 VAMSIAGVGVAGQNVAI-IYVSEIAHDSIRGGLTAFSSSGYIIGLLTSYILGGKLTY 541
           +   + G+ +   ++ + IYVSE +   IRG L         +GL+ + I+GG  +Y
Sbjct: 126 IGRILLGLAIGFASMIVPIYVSEASPSHIRGKLVTGFQLMITVGLVIANIIGGAFSY 182


>AL021497-2|CAA16400.1|  606|Caenorhabditis elegans Hypothetical
           protein Y51A2D.4 protein.
          Length = 606

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
 Frame = +2

Query: 185 RPM-SAWEISLLGSLPNFGALLASPFCGLAFNILGRKYATIFFGLPYVITWTIISLTDNV 361
           +PM + W+  L+   P   A+  S   G + + +GR+   +     + I   + + + N 
Sbjct: 60  KPMDTVWQEVLVSISPGMAAV-GSLMSGTSSDYIGRRKVILGASAIFTIGALVCAASVNK 118

Query: 362 ILVLVAMSIAGVGVAGQNVAI-IYVSEIAHDSIRGGLTAFSSSGYIIGLLTSYILGGKLT 538
           I++LV   + G+ +   ++ + +Y+ E A   +RG L A  +     G + + I GG  +
Sbjct: 119 IMLLVGRVLLGIAIGFASMIVPVYLGETAPTHVRGMLVAAFALMISFGQVVANITGGAFS 178

Query: 539 Y 541
           Y
Sbjct: 179 Y 179


>AL021497-3|CAA16405.1|  613|Caenorhabditis elegans Hypothetical
           protein Y51A2D.5 protein.
          Length = 613

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
 Frame = +2

Query: 185 RPM-SAWEISLLGSLPNFGALLASPFCGLAFNILGRKYATIFFGLPYVITWTIISLTDNV 361
           +PM + W+  ++   P   A+ A  F G   +  GRK   I   L +V    I ++    
Sbjct: 61  KPMGTVWKEVIVSITPGMAAVGAW-FSGAGSDRYGRKPIIIGSTLIFVCGAVICAVAWTK 119

Query: 362 ILVLVAMSIAGVGVAGQNVAI-IYVSEIAHDSIRGGLTAFSSSGYIIGLLTSYILGGKLT 538
           I++L+     GVG+   ++ + +Y+ E +   +RG L +  +     G + + I+GG  +
Sbjct: 120 IVMLIGRIFLGVGIGFASMVVPVYLGEASPTHVRGTLVSAFAMMISFGQVVANIMGGVFS 179

Query: 539 YQQVVYTHLGFSVM 580
           Y +  YT +G+ +M
Sbjct: 180 YWE-PYT-IGWRLM 191


>Z48638-6|CAA88567.1|  541|Caenorhabditis elegans Hypothetical
           protein ZK892.3 protein.
          Length = 541

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
 Frame = +2

Query: 236 GALLASPFCGLAFNILGRK---YATIFFGLPYVITWTIISLTDNVILVLVAMSIAGVGVA 406
           G L A+   G+  + LGR+   +A+I  G   V++  + +   ++I   +     GVGVA
Sbjct: 115 GVLFANLILGVLADKLGRRPIFFASIAIG---VVSLILSAAIPSLIAFYIFRFTTGVGVA 171

Query: 407 G-QNVAIIYVSEIAHDSIRGGLTAFSSSGYIIGLLTSYILGGKLTYQQVVYTHLGFSVMT 583
           G Q V   Y SE+     R  L  FS+      +L  ++      +    Y     S + 
Sbjct: 172 GAQIVGWSYGSEMISAKRRFQLRTFSNWANA-RILVVFVAFITRRWDTASYVCAAISALI 230

Query: 584 MLLLTLLRESPVFLVMKGR 640
             +L  L ESPVFL  K R
Sbjct: 231 FPILWKLPESPVFLEQKHR 249


>U80931-7|AAB38003.2|  526|Caenorhabditis elegans Organic anion
           transporter protein 1 protein.
          Length = 526

 Score = 35.9 bits (79), Expect = 0.024
 Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
 Frame = +2

Query: 221 SLPNFGALLASPFCGLAFNILGRKYATIFFGLPYVITWTIISLTDNVILVLVAMSIAGVG 400
           ++  FG L+ +   G   +  GR+ A I   +   I   I S + ++   ++  +++G+ 
Sbjct: 130 TIQTFGVLVGAAIFGQVSDNFGRRKALIISCIGNAIFNLISSYSPSLFYFMLWRTVSGIF 189

Query: 401 VAGQNVA-IIYVSEIA--HDSIRGGLTAFSSSGYIIGLLTSYILGGKLTYQQVVYTHLGF 571
             G  V  ++Y+ E    H  +    +   S   II    +Y+     T   V+      
Sbjct: 190 AGGLTVVQMVYMVENIPRHHRMWIQNSITWSPNLIIFPYIAYLAQNWRTLSVVISAT--- 246

Query: 572 SVMTMLLLTLLRESPVFLVMKGR 640
           SV++ L L LL ESP +LV KG+
Sbjct: 247 SVLSFLALMLLEESPRWLVQKGK 269


>AF152095-1|AAF73198.1|  526|Caenorhabditis elegans multispecific
           organic anion transporterprotein.
          Length = 526

 Score = 35.9 bits (79), Expect = 0.024
 Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
 Frame = +2

Query: 221 SLPNFGALLASPFCGLAFNILGRKYATIFFGLPYVITWTIISLTDNVILVLVAMSIAGVG 400
           ++  FG L+ +   G   +  GR+ A I   +   I   I S + ++   ++  +++G+ 
Sbjct: 130 TIQTFGVLVGAAIFGQVSDNFGRRKALIISCIGNAIFNLISSYSPSLFYFMLWRTVSGIF 189

Query: 401 VAGQNVA-IIYVSEIA--HDSIRGGLTAFSSSGYIIGLLTSYILGGKLTYQQVVYTHLGF 571
             G  V  ++Y+ E    H  +    +   S   II    +Y+     T   V+      
Sbjct: 190 AGGLTVVQMVYMVENIPRHHRMWIQNSITWSPNLIIFPYIAYLAQNWRTLSVVISAT--- 246

Query: 572 SVMTMLLLTLLRESPVFLVMKGR 640
           SV++ L L LL ESP +LV KG+
Sbjct: 247 SVLSFLALMLLEESPRWLVQKGK 269


>Z68296-1|CAA92589.2|  520|Caenorhabditis elegans Hypothetical
           protein C46C2.2 protein.
          Length = 520

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
 Frame = +2

Query: 236 GALLASPFCGLAFNILGRKYATIFFGLPYVITWTIISLTDNVILVLVAMSIAGVGVAG-Q 412
           G L+ +   G   + +GRK   I   L  + + ++ +  +++    +  ++ G+G+AG  
Sbjct: 118 GVLIGNIILGYVADQIGRKKTFILSMLIGIPSLSLSATFNSIAAFYIFRALTGIGIAGTM 177

Query: 413 NVAIIYVSEIAHDSIRGGLTAFSSSGYIIGLLTSYILGGKLTYQQVVYTHLG--FSVMTM 586
            V   Y SE+     R  L  FS+      +LT   L    T +  + +H+    S++T+
Sbjct: 178 IVGWAYFSELVSPHQRFKLRTFSNWANARIMLTLVAL---FTGEWRLSSHVSAVISLITL 234

Query: 587 -LLLTLLRESPVFLVMKGR 640
            ++  +L ES ++L  KGR
Sbjct: 235 AIVYFILPESHIWLRKKGR 253


>Z79602-1|CAB01888.3|  508|Caenorhabditis elegans Hypothetical
           protein K09E9.1 protein.
          Length = 508

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
 Frame = +2

Query: 209 SLLGSLPNFGALLASPFCGLAFNILGRKYATIFFGLPYVITWTIISLTDNVIL--VLVAM 382
           +++ SL  +GAL+ S  CG   + LGRK   ++ G   +IT   I LT ++ L  + +  
Sbjct: 116 AMMSSLLMWGALIGSFVCGFLSDRLGRK--PVYLGCLLMITIGHILLTFSMYLSWMTINA 173

Query: 383 SIAGVG--VAGQNVAIIYVSEIAHDSIRGGLTAFSSSGYIIGLLTSYILGGKLTYQQVVY 556
           ++A +G    G  V    +   A +  +  L   S +G+ + +  +  L    T     Y
Sbjct: 174 TLAAMGFFCGGYMVTNFVILTEAFELPKSRLLVVSLNGWSVSMAVT-ALAASYTLNWYAY 232

Query: 557 THLGFSVM 580
            H  F+++
Sbjct: 233 -HTIFAIV 239


>Z73899-7|CAA98077.1|  492|Caenorhabditis elegans Hypothetical
           protein ZK829.9 protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
 Frame = +2

Query: 185 RPMSAWEISLLGSLPNFGALLASPFCGLAFNIL----GRKYA---TIFFGLPYVITWTII 343
           RP+   E+SLL S  N    L      ++   L    GRK A   +I F         + 
Sbjct: 57  RPLDHEEVSLLKSGINSAWYLFQVVGAMSSPFLCDNYGRKVAFALSIAFMTLAGAMQMLA 116

Query: 344 SLTDNVILVLVAMSIAGVGVAGQNVAII-YVSEIAHDSIRGGLTAFSSSGY----IIGLL 508
           S T    +++    IA V     + A+I Y+ EI+  S+RG +++  S+GY    ++G+L
Sbjct: 117 SFTPYSEVLIAGRLIAAVFSPLSDAALILYLQEISPSSLRGTMSSLYSTGYSTMCLLGML 176

Query: 509 TSY--ILGGKLTYQQVVYTHLGFSVMTMLLLTLLRESPVFLVM 631
             +  +LG  L+   +++  +   +++   +  + ++P FL++
Sbjct: 177 LGHEGLLGHSLSV--LLFVPVIPGILSTAFILWMPDTPKFLLL 217


>Z71186-7|CAM35835.1|  552|Caenorhabditis elegans Hypothetical
           protein F23D12.10 protein.
          Length = 552

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 20/49 (40%), Positives = 29/49 (59%)
 Frame = -2

Query: 294 YFLPKMLKASPQKGLANSAPKLGKLPSSDISHADIGLSKSVELDSKFEV 148
           Y+ P+ L+A     L  + PK+G  PSS +S AD  LS  +EL S F++
Sbjct: 48  YYKPQSLEA-----LNPTFPKIGTCPSSTVSMAD-NLSGILELHSSFDL 90


>U29377-2|AAA68713.4|  627|Caenorhabditis elegans Hypothetical
           protein K05F1.6b protein.
          Length = 627

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
 Frame = +2

Query: 230 NFGALLASPFCGLAFNILGRKYATIFFGLPYVITWTIISLTDNV-ILVLVAMSIAGVGVA 406
           + G LL     G+A + +GRK   I FG+   +    +   D   + +L+ +  A    A
Sbjct: 135 SIGYLLGCVLGGIASDKIGRKPTIIGFGILSSMLGVFLPFNDYYPMFLLIRLLSAICNEA 194

Query: 407 GQNVAIIYVSEIAHDSIR----GGLTAFSSSGYIIGLLTSYILGGKLTYQQVVYTHLGFS 574
               A     EI     R      L A  + GY +  L +Y+     T Q +     G  
Sbjct: 195 ADLAAYTLCMEITGTKYRAMVGSMLQAPWALGYALLALIAYLTKSWKTIQVIA---AGLH 251

Query: 575 VMTMLLLTLLRESPVFLVMKGR 640
            M+++ +  + ESP +L+++ R
Sbjct: 252 FMSIIFICSIPESPRWLMVQNR 273


>U29377-1|AAZ94294.1|  773|Caenorhabditis elegans Hypothetical
           protein K05F1.6a protein.
          Length = 773

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
 Frame = +2

Query: 230 NFGALLASPFCGLAFNILGRKYATIFFGLPYVITWTIISLTDNV-ILVLVAMSIAGVGVA 406
           + G LL     G+A + +GRK   I FG+   +    +   D   + +L+ +  A    A
Sbjct: 281 SIGYLLGCVLGGIASDKIGRKPTIIGFGILSSMLGVFLPFNDYYPMFLLIRLLSAICNEA 340

Query: 407 GQNVAIIYVSEIAHDSIR----GGLTAFSSSGYIIGLLTSYILGGKLTYQQVVYTHLGFS 574
               A     EI     R      L A  + GY +  L +Y+     T Q +     G  
Sbjct: 341 ADLAAYTLCMEITGTKYRAMVGSMLQAPWALGYALLALIAYLTKSWKTIQVIA---AGLH 397

Query: 575 VMTMLLLTLLRESPVFLVMKGR 640
            M+++ +  + ESP +L+++ R
Sbjct: 398 FMSIIFICSIPESPRWLMVQNR 419


>AL021497-13|CAA16411.2|  550|Caenorhabditis elegans Hypothetical
           protein Y51A2D.18 protein.
          Length = 550

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +2

Query: 221 SLPNFGALLASPFCGLAFNILGRKYATIFFGLPYVITWTIISLTDNVILVLVAMSIAGVG 400
           S+  FG L  S   G   +  GRK  +    L  +I W I+  + N++   ++ +I G  
Sbjct: 133 SVQMFGVLTGSIVFGQISDSFGRKIGSQVASLGMLIGWLIVVQSRNLLHFTISRTIVGF- 191

Query: 401 VAGQNVAIIYV 433
             G +++II V
Sbjct: 192 FTGGSISIINV 202


>Z48543-2|CAA88433.2|  478|Caenorhabditis elegans Hypothetical
           protein C18D1.2 protein.
          Length = 478

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 11/202 (5%)
 Frame = +2

Query: 50  VTTAELITQSLAMLCISLLACQTGYICXWXSYTTSNFESNSTLLDRPM-SAWEISLLGSL 226
           ++ +  +T +  ++C+S L   T       S    +F  +  L    + +A + +LL S 
Sbjct: 28  ISQSNTLTLNFTIICMSTLHNFTATEASEKSTNVLDFMLHKILQKTYVYTASQSNLLFSA 87

Query: 227 PNFGALLAS-PFCGLAFNILGRKYATIFFGLPYVITWTIISLTDNV-ILVLVAMS-IAGV 397
              GA+ A  PF  +     G +    F GL    T  +I     +    L+AM  + G+
Sbjct: 88  VAIGAMCAVYPFMYI-IQKKGSRSVVTFVGLFSAATTAMIPWAAYLGFYPLLAMRFLQGI 146

Query: 398 GVAGQNVAIIYVSEIAHDSIRGG-----LTAFSSSGYIIGL-LTSYILGGKLTYQQVVYT 559
           G++     I  V+      ++G      L+ F   G I  + + S        +  V YT
Sbjct: 147 GLSTGFTLIGIVTRQWSMQVQGAFFFACLSCFFQIGPIFTMPVASAFCTSSFGWPAVYYT 206

Query: 560 HLGFSVMTMLLL-TLLRESPVF 622
           H   ++   LL  TL RESPVF
Sbjct: 207 HSIVTIFIFLLFFTLYRESPVF 228


>Z72502-4|CAA96589.1|  750|Caenorhabditis elegans Hypothetical
           protein C08B6.7 protein.
          Length = 750

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 38  MDKKVTTAELITQSLAMLCISLLACQTGYICXW 136
           M KKV+   L        C+ + ACQ GYIC W
Sbjct: 642 MCKKVSHDRLTVLEFREDCV-VTACQEGYICTW 673


>U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical
           protein D1044.6 protein.
          Length = 1009

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 134 WXSYTTSNFESNSTLLDRPMSAWEISLLGSLP 229
           W     S+F+  S LLD  M  W+++ + ++P
Sbjct: 136 WSEQELSDFDMKSRLLDMRMDHWDLARIANVP 167


>U00031-5|AAP68960.1|  534|Caenorhabditis elegans Hypothetical
           protein B0361.11 protein.
          Length = 534

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 34/169 (20%), Positives = 69/169 (40%), Gaps = 5/169 (2%)
 Frame = +2

Query: 149 TSNFESNSTLLDRPMSA--WEISLLG-SLPNFGALLASPFCGLAFNILGRKYATIFFGLP 319
           T+   S + L+D  +S   W     G ++   GA++A PF  +  +  GRK   +   + 
Sbjct: 124 TNQKASTNLLVDFDLSCSHWFFQEFGLTIFTIGAVIAVPFMSMLADRYGRKPIIVTTAIL 183

Query: 320 YVITWTIISLTDNVILVLVAMSIAGV-GVAGQNVAIIYVSEIAHDSIRGGLTAFSSSGYI 496
             +     S + N  + L+  +  G    +  +VA +   E   +  R  +T   +  + 
Sbjct: 184 AFLANMAASFSPNFAIFLILRAFIGACSDSYLSVASVATCEYLSEKARAWITVVYNVAWS 243

Query: 497 IGLLTSYILGGKLTYQQVVYTHLGF-SVMTMLLLTLLRESPVFLVMKGR 640
           +G++ + ++       +  Y  +    V    L   L ESP +L+ K +
Sbjct: 244 LGMVWTLLVTLMTDDWRWRYFIVSLPGVYGFALWYFLPESPHWLITKNK 292


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,679,226
Number of Sequences: 27780
Number of extensions: 349718
Number of successful extensions: 1002
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)