Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3f23
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U72849-1|AAD00186.1| 2033|Homo sapiens envoplakin protein. 33 1.4
U53786-1|AAC64662.1| 2033|Homo sapiens envoplakin protein. 33 1.4
BC126105-1|AAI26106.1| 2033|Homo sapiens envoplakin protein. 33 1.4
BC126103-1|AAI26104.1| 2033|Homo sapiens envoplakin protein. 33 1.4
DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein. 32 2.4
AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein. 32 2.4
BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein. 31 4.3
AF458591-1|AAM49719.1| 590|Homo sapiens hypothetical protein pr... 31 4.3
BC129945-1|AAI29946.1| 991|Homo sapiens SFI1 protein protein. 31 5.6
BC129926-1|AAI29927.1| 1008|Homo sapiens SFI1 protein protein. 31 5.6
BC110814-1|AAI10815.1| 1137|Homo sapiens SFI1 protein protein. 31 5.6
AB011114-1|BAA25468.2| 1212|Homo sapiens KIAA0542 protein protein. 31 5.6
>U72849-1|AAD00186.1| 2033|Homo sapiens envoplakin protein.
Length = 2033
Score = 32.7 bits (71), Expect = 1.4
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +2
Query: 173 DFCESKTESLSNWVRQVKNKSLTAKTKRKRDLRVIAILSHSLVRAETELVMKQRERARKW 352
D + KT+ ++ R+ KN + +K + I ++R + + V++ ERAR W
Sbjct: 1484 DLDQEKTQ-VTELNRECKNLQVQIDVLQKAKSQEKTIYKE-VIRVQKDRVLED-ERARVW 1540
Query: 353 AQMQVDLGLSNKEEEIARRHREKID 427
+ + EE ARR RE+ID
Sbjct: 1541 EMLNRERTARQAREEEARRLRERID 1565
>U53786-1|AAC64662.1| 2033|Homo sapiens envoplakin protein.
Length = 2033
Score = 32.7 bits (71), Expect = 1.4
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +2
Query: 173 DFCESKTESLSNWVRQVKNKSLTAKTKRKRDLRVIAILSHSLVRAETELVMKQRERARKW 352
D + KT+ ++ R+ KN + +K + I ++R + + V++ ERAR W
Sbjct: 1484 DLDQEKTQ-VTELNRECKNLQVQIDVLQKAKSQEKTIYKE-VIRVQKDRVLED-ERARVW 1540
Query: 353 AQMQVDLGLSNKEEEIARRHREKID 427
+ + EE ARR RE+ID
Sbjct: 1541 EMLNRERTARQAREEEARRLRERID 1565
>BC126105-1|AAI26106.1| 2033|Homo sapiens envoplakin protein.
Length = 2033
Score = 32.7 bits (71), Expect = 1.4
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +2
Query: 173 DFCESKTESLSNWVRQVKNKSLTAKTKRKRDLRVIAILSHSLVRAETELVMKQRERARKW 352
D + KT+ ++ R+ KN + +K + I ++R + + V++ ERAR W
Sbjct: 1484 DLDQEKTQ-VTELNRECKNLQVQIDVLQKAKSQEKTIYKE-VIRVQKDRVLED-ERARVW 1540
Query: 353 AQMQVDLGLSNKEEEIARRHREKID 427
+ + EE ARR RE+ID
Sbjct: 1541 EMLNRERTARQAREEEARRLRERID 1565
>BC126103-1|AAI26104.1| 2033|Homo sapiens envoplakin protein.
Length = 2033
Score = 32.7 bits (71), Expect = 1.4
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +2
Query: 173 DFCESKTESLSNWVRQVKNKSLTAKTKRKRDLRVIAILSHSLVRAETELVMKQRERARKW 352
D + KT+ ++ R+ KN + +K + I ++R + + V++ ERAR W
Sbjct: 1484 DLDQEKTQ-VTELNRECKNLQVQIDVLQKAKSQEKTIYKE-VIRVQKDRVLED-ERARVW 1540
Query: 353 AQMQVDLGLSNKEEEIARRHREKID 427
+ + EE ARR RE+ID
Sbjct: 1541 EMLNRERTARQAREEEARRLRERID 1565
>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
Length = 2479
Score = 31.9 bits (69), Expect = 2.4
Identities = 29/115 (25%), Positives = 62/115 (53%), Gaps = 16/115 (13%)
Frame = +2
Query: 194 ESLSNWVRQVKNKSLTAKTKR--KRDLRVIAILSHSLVRAETELVMK-QRERARKWAQMQ 364
E L ++ +K+ A+T++ KR+L+V+ + +H L + + EL+ + + + + A+
Sbjct: 2315 EDLEQQIKILKHVPEGAETEQGLKRELQVLRLANHQLDKEKAELIHQIEANKDQSGAEST 2374
Query: 365 V-----------DLGLSNKEEEIARRH-REKIDYLWKNDLSGLD-SFFKELDNVK 490
+ DL K ++ ++H +E+I L K +L D SFF+E++++K
Sbjct: 2375 IPDADQLKEKIKDLETQLKMSDLEKQHLKEEIKKL-KKELENFDPSFFEEIEDLK 2428
>AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.
Length = 1540
Score = 31.9 bits (69), Expect = 2.4
Identities = 29/115 (25%), Positives = 62/115 (53%), Gaps = 16/115 (13%)
Frame = +2
Query: 194 ESLSNWVRQVKNKSLTAKTKR--KRDLRVIAILSHSLVRAETELVMK-QRERARKWAQMQ 364
E L ++ +K+ A+T++ KR+L+V+ + +H L + + EL+ + + + + A+
Sbjct: 1376 EDLEQQIKILKHVPEGAETEQGLKRELQVLRLANHQLDKEKAELIHQIEANKDQSGAEST 1435
Query: 365 V-----------DLGLSNKEEEIARRH-REKIDYLWKNDLSGLD-SFFKELDNVK 490
+ DL K ++ ++H +E+I L K +L D SFF+E++++K
Sbjct: 1436 IPDADQLKEKIKDLETQLKMSDLEKQHLKEEIKKL-KKELENFDPSFFEEIEDLK 1489
>BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein.
Length = 913
Score = 31.1 bits (67), Expect = 4.3
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +2
Query: 134 LIMGYSAKESSVVDFCESKTESLSNWVRQVKNKSLTAKTK-RKRDLRVIAILSHSLVRAE 310
L+ ++A++ S+V E + E+L +R + + +KRD +VIA + + +
Sbjct: 633 LLQQHNAEKDSLVRDHEREIENLEKQLRAANMEHENQIQEFKKRDAQVIADMEAQVHKLR 692
Query: 311 TELVMKQRERARKWAQMQVDLGLSNKEEEIARRHRE 418
EL+ +R Q V+LGL +EEE R RE
Sbjct: 693 EELINVNSQR----KQQLVELGLL-REEEKQRATRE 723
>AF458591-1|AAM49719.1| 590|Homo sapiens hypothetical protein
protein.
Length = 590
Score = 31.1 bits (67), Expect = 4.3
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +2
Query: 134 LIMGYSAKESSVVDFCESKTESLSNWVRQVKNKSLTAKTK-RKRDLRVIAILSHSLVRAE 310
L+ ++A++ S+V E + E+L +R + + +KRD +VIA + + +
Sbjct: 310 LLQQHNAEKDSLVRDHEREIENLEKQLRAANMEHENQIQEFKKRDAQVIADMEAQVHKLR 369
Query: 311 TELVMKQRERARKWAQMQVDLGLSNKEEEIARRHRE 418
EL+ +R Q V+LGL +EEE R RE
Sbjct: 370 EELINVNSQR----KQQLVELGLL-REEEKQRATRE 400
>BC129945-1|AAI29946.1| 991|Homo sapiens SFI1 protein protein.
Length = 991
Score = 30.7 bits (66), Expect = 5.6
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 678 HDTVLQTHFCSWQQ 637
H TVLQ HFC WQQ
Sbjct: 291 HVTVLQIHFCDWQQ 304
>BC129926-1|AAI29927.1| 1008|Homo sapiens SFI1 protein protein.
Length = 1008
Score = 30.7 bits (66), Expect = 5.6
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 678 HDTVLQTHFCSWQQ 637
H TVLQ HFC WQQ
Sbjct: 139 HVTVLQIHFCDWQQ 152
>BC110814-1|AAI10815.1| 1137|Homo sapiens SFI1 protein protein.
Length = 1137
Score = 30.7 bits (66), Expect = 5.6
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 678 HDTVLQTHFCSWQQ 637
H TVLQ HFC WQQ
Sbjct: 210 HVTVLQIHFCDWQQ 223
>AB011114-1|BAA25468.2| 1212|Homo sapiens KIAA0542 protein protein.
Length = 1212
Score = 30.7 bits (66), Expect = 5.6
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 678 HDTVLQTHFCSWQQ 637
H TVLQ HFC WQQ
Sbjct: 316 HVTVLQIHFCDWQQ 329
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,046,609
Number of Sequences: 237096
Number of extensions: 2359980
Number of successful extensions: 5730
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5718
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -