Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3f14
(740 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0140 + 5864612-5864955,5865154-5865381,5865460-5865814,586... 279 2e-75
09_02_0577 - 10862976-10863215,10863653-10863788,10863906-108640... 271 3e-73
09_02_0576 - 10853361-10853600,10854033-10854168,10854285-108544... 271 3e-73
03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598 216 2e-56
12_02_1195 + 26906814-26907121,26907771-26907992,26908913-269091... 123 1e-28
09_04_0704 + 19623046-19623386,19623583-19623792,19623872-196242... 123 2e-28
12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388 99 2e-21
12_02_1184 + 26785739-26786113 65 5e-11
12_02_1183 - 26764883-26765174,26765559-26765677 62 3e-10
12_02_1185 + 26786543-26786545,26786676-26786686,26787032-267872... 56 4e-08
02_01_0240 - 1593186-1593323,1593380-1593406 31 1.3
12_01_0384 + 3012359-3012404,3012641-3012825,3013014-3013045,301... 30 2.2
06_02_0364 + 15178583-15178881,15179652-15179723,15179853-151799... 29 2.9
06_01_0476 - 3388176-3389267 28 6.8
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 28 9.0
09_02_0430 - 9313768-9314259,9314347-9315299,9316875-9317022 28 9.0
>03_02_0140 +
5864612-5864955,5865154-5865381,5865460-5865814,
5865899-5866023,5866150-5866285,5866382-5866621
Length = 475
Score = 279 bits (683), Expect = 2e-75
Identities = 127/193 (65%), Positives = 162/193 (83%), Gaps = 1/193 (0%)
Frame = +2
Query: 164 GIRFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 343
G R L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 344 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 520
FYW+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQKL G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 521 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 700
++I +G+A+ YV++GMYG S++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 124 ILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGIS 183
Query: 701 LFIATNICETXVW 739
LFIATNICE +W
Sbjct: 184 LFIATNICENIIW 196
>09_02_0577 -
10862976-10863215,10863653-10863788,10863906-10864030,
10864132-10864516,10864571-10864798,10864976-10865319
Length = 485
Score = 271 bits (665), Expect = 3e-73
Identities = 125/188 (66%), Positives = 159/188 (84%), Gaps = 1/188 (0%)
Frame = +2
Query: 164 GIRFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 343
G R L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 344 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 520
FYW+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQKL G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 521 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 700
++I +G+A+ YV++GMYG S++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 124 ILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGIS 183
Query: 701 LFIATNIC 724
LFIATNIC
Sbjct: 184 LFIATNIC 191
>09_02_0576 -
10853361-10853600,10854033-10854168,10854285-10854409,
10854487-10854871,10854934-10855161,10855332-10855675
Length = 485
Score = 271 bits (665), Expect = 3e-73
Identities = 125/188 (66%), Positives = 159/188 (84%), Gaps = 1/188 (0%)
Frame = +2
Query: 164 GIRFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 343
G R L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 344 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 520
FYW+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQKL G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 521 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 700
++I +G+A+ YV++GMYG S++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 124 ILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGIS 183
Query: 701 LFIATNIC 724
LFIATNIC
Sbjct: 184 LFIATNIC 191
>03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598
Length = 537
Score = 216 bits (527), Expect = 2e-56
Identities = 99/195 (50%), Positives = 139/195 (71%), Gaps = 6/195 (3%)
Frame = +2
Query: 170 RFLEVIKPFCSILPEIAKPE-RKIQFREKVLWTAITLFIFLVCCQIPLFGI----MSSDS 334
R L++++PF +LPE+ +P+ R++ FR K+ TA LF FL C Q+PL+G+ +
Sbjct: 10 RLLDLVRPFMPLLPEVREPDGRRVPFRRKLACTAAALFAFLACSQLPLYGLHRAAAAGGG 69
Query: 335 ADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQK 511
ADPFYW+R ILASNRGT+MELGI+P+VT+G ++QLL G+ ++ + P DRAL + AQK
Sbjct: 70 ADPFYWVRAILASNRGTVMELGITPVVTAGTLVQLLVGSNLVRADSSNPDDRALLSAAQK 129
Query: 512 LFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGS 691
L +VIT G+A YV++G YG +GAG +L+++QL + G++ + LDELLQKGYG GS
Sbjct: 130 LLSIVITAGEATAYVLSGAYGSVGVLGAGNAVLVVLQLVLGGMVAIFLDELLQKGYGFGS 189
Query: 692 GISLFIATNICETXV 736
GISLF A N CE V
Sbjct: 190 GISLFTAANTCEGVV 204
>12_02_1195 +
26906814-26907121,26907771-26907992,26908913-26909153,
26909512-26909642,26910336-26910474,26910600-26910810,
26911371-26911759
Length = 546
Score = 123 bits (297), Expect = 1e-28
Identities = 65/172 (37%), Positives = 99/172 (57%), Gaps = 4/172 (2%)
Frame = +2
Query: 236 IQFREKVLWTAITLFIFLVCCQIPLFGIMS----SDSADPFYWIRVILASNRGTLMELGI 403
+ FR K +TA +L +FLV Q+PL+G+ D DP YW+ + AS+ TLM LGI
Sbjct: 15 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 74
Query: 404 SPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPS 583
P++ S + +++ + +I P N A+KL + + + A+ V++ G +
Sbjct: 75 IPLLLSEMAVRIFSA--LIITRWPPFHHVRLNRARKLLAIAMAMVMAVSGVLSA--GVAA 130
Query: 584 EIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETXVW 739
E+G L+++ QLF+ G+I + LDELLQKGYGL SG+SLF A N C W
Sbjct: 131 ELGTMASLVVMFQLFLGGMIAIYLDELLQKGYGLLSGVSLFAAANCCACIFW 182
>09_04_0704 +
19623046-19623386,19623583-19623792,19623872-19624223,
19624320-19624444,19624578-19624668,19624817-19625050
Length = 450
Score = 123 bits (296), Expect = 2e-28
Identities = 66/184 (35%), Positives = 112/184 (60%), Gaps = 4/184 (2%)
Frame = +2
Query: 200 SILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSA---DPFYWIRVILA 370
+++PE+ P++ I R+K +TAI LFIF+ Q+ L+GI DP +W+ +ILA
Sbjct: 12 ALVPEVQCPDQPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEPDPLHWLHLILA 71
Query: 371 SNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQKLFGMVITVGQAI 547
S+R TL+ GI I+ +++++ KII + + P+ L N AQ+L G+++ + A+
Sbjct: 72 SSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRLLGILVAILGAV 131
Query: 548 VYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICE 727
+ + + + + LI++Q+ + +IV+ LD++L+KGYGL SGISLF ATNIC
Sbjct: 132 NFYVRSQHFTVNTV------LIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTATNICV 185
Query: 728 TXVW 739
+W
Sbjct: 186 NILW 189
>12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388
Length = 483
Score = 99 bits (238), Expect = 2e-21
Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Frame = +2
Query: 164 GIRFLEVIKPFCSILPEIAKP-ERKIQFREKVLWTAI-TLFIFLVCCQIPLFGIMSSDSA 337
G +++P + P + + E + FR +V TA +L + L +PL+
Sbjct: 13 GTALWRLLRPLAVLGPRMQRRREAAVPFRGQVRNTAAASLLLLLSLSHVPLYAGAGDADP 72
Query: 338 DPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLF 517
DP +W R +LA+ RGT+MELG++P+VTS ++++LLA ++ D+ A +
Sbjct: 73 DPLFWARPLLAAPRGTVMELGVAPVVTSWVVVRLLAA--LLFDSDSSTTVASCELLARCL 130
Query: 518 GMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLG--S 691
V + ++ + + G GAG L+++QLF G++V+L D L + GYG+ S
Sbjct: 131 AYVTNASRLVIGIAAAL-GMCGSGGAGNAALVVLQLFAGGVVVVLADLLHETGYGVEGVS 189
Query: 692 GISLFIATNICETXV 736
SL IATN CE V
Sbjct: 190 AASLLIATNACERAV 204
>12_02_1184 + 26785739-26786113
Length = 124
Score = 65.3 bits (152), Expect = 5e-11
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = +2
Query: 236 IQFREKVLWTAITLFIFLVCCQIPLFGIMS---SDSADPFYWIRVILASNRGTLMELGIS 406
+ FR KVL+TA++L +FLV ++ L+G+ + DP YW+ + AS R T+M LG+
Sbjct: 33 VSFRRKVLYTAVSLLVFLVAGELLLYGVQNYYGGGEHDPRYWMNAMSASLRPTVMALGLV 92
Query: 407 PIVTSGLIMQLLAGAKIIEVGD 472
P++ S +++ L KII V D
Sbjct: 93 PLLYSEMVVHLCMALKIIGVHD 114
>12_02_1183 - 26764883-26765174,26765559-26765677
Length = 136
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = +2
Query: 236 IQFREKVLWTAITLFIFLVCCQIPLFGIMS----SDSADPFYWIRVILASNRGTLMELGI 403
+ FR K +TA +L +FLV Q+PL+G+ D DP YW+ + AS+ TLM LGI
Sbjct: 48 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 107
Query: 404 SPIVTSGLIMQLLA 445
P++ S + +++ +
Sbjct: 108 IPLLLSEMAVRIFS 121
>12_02_1185 +
26786543-26786545,26786676-26786686,26787032-26787262,
26787892-26788012,26788263-26788393,26788718-26788760,
26788963-26789220
Length = 265
Score = 55.6 bits (128), Expect = 4e-08
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 506 QKLFGMVITVGQ--AIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGY 679
++LF M I + AIV + + G I L+ + QL GLI + LD+LL+KGY
Sbjct: 9 RRLFAMQIAIVSPVAIVLYASAIAGGTPFITTAA-LVFVFQLIAGGLIAIYLDDLLRKGY 67
Query: 680 GLGSGISLFIATNICETXVW 739
G SG+SLF A N C W
Sbjct: 68 GFLSGLSLFSAANCCACIFW 87
>02_01_0240 - 1593186-1593323,1593380-1593406
Length = 54
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 292 MLPDSLIWYNVIRQCRSLLLDPCNSCIKQRDI 387
++ D L+W + R C+S ++P C R I
Sbjct: 15 LISDGLLWLAIARCCKSTCMEPIQGCFLSRQI 46
>12_01_0384 +
3012359-3012404,3012641-3012825,3013014-3013045,
3013387-3013514,3013695-3013940,3014200-3014284,
3014369-3014387,3014563-3014667
Length = 281
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 147 RNKSKWE*DFWK*LSRSAVYCQK*RN--QNVRFNSERKYYGQQS 272
RN +WE D W+ S ++Y Q+ + F S+ K+YG S
Sbjct: 66 RNVQEWEEDVWRSSSVLSIYHQRGTRGYKQAAFKSKDKFYGSSS 109
>06_02_0364 +
15178583-15178881,15179652-15179723,15179853-15179917,
15180890-15180934,15182493-15183170,15183376-15183410,
15183647-15183736,15183896-15183985,15184164-15184262,
15184938-15185013,15185473-15185588
Length = 554
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 631 HKQLYDNEEAHSGTNFTGFTIHSSHYINNSLTNSNHHTK*FLCT--IKQSPVFRSVT-NF 461
H +L D +EA SG G H H ++ HH L T I+ + SV +F
Sbjct: 112 HSRLIDLKEASSGFELMGMHRHRQHRVDFMEWAPGHHVGVALITMPIRAGARYCSVVGDF 171
Query: 460 NDFSTSK 440
N +ST++
Sbjct: 172 NQWSTTE 178
>06_01_0476 - 3388176-3389267
Length = 363
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 599 VCLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 694
V +++ + LFV+GL+ LL+ LL++G G G
Sbjct: 33 VLVILAVVLFVSGLLHLLVRFLLRRGRGRDGG 64
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 419 SGLIMQLLAGAKIIEVGDTPKDRALFN-GAQKLFGMV-ITVGQAIVYVMTGMYGEPSEIG 592
+G +L+ A ++ K RA G +KL V +T+G V+ YG P +
Sbjct: 27 NGRAQRLVVRADAKDIAFDQKSRAALQAGVEKLANAVGVTLGPRGRNVVLDEYGSPKVVN 86
Query: 593 AGVCLLIIIQLF 628
GV + I+L+
Sbjct: 87 DGVTIARAIELY 98
>09_02_0430 - 9313768-9314259,9314347-9315299,9316875-9317022
Length = 530
Score = 27.9 bits (59), Expect = 9.0
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Frame = +2
Query: 302 IPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK 481
IP F +S ++ FY + + G L S I S L++ L ++ D
Sbjct: 295 IPAFQQLSGMNSILFYSPVIFQSLGFGNSAALYSSIITGSMLVVGALVSMVVV---DRLG 351
Query: 482 DRALF--NGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFV 631
R LF G Q + MV+ A++ + +GE G G L++ I LFV
Sbjct: 352 RRFLFIEAGIQMISSMVVV---AVILALKFGHGEELSKGVGTVLVVAICLFV 400
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,721,054
Number of Sequences: 37544
Number of extensions: 419928
Number of successful extensions: 1171
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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