Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3f13
(747 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 25 1.00
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 3.0
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 4.0
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 4.0
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 5.3
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 7.0
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 9.3
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 9.3
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 9.3
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 9.3
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 24.6 bits (51), Expect = 1.00
Identities = 25/94 (26%), Positives = 40/94 (42%)
Frame = +2
Query: 386 ERSVLGSVPDTLAPGLQGRRLSLPDRPIR*NPVLGRRLRGHLEGYGAARQRGSGQEHRSL 565
++S+LGS+ +L+ + RR D + N + E + SG E S
Sbjct: 7 DQSLLGSIARSLSLDRRARR-GAADLSLAGNATKVNTVH---EEESSLNDLFSGPEESSG 62
Query: 566 QLQLEAAGEVAAARDCQAGRQSGGMSSLPQPETP 667
++L + AAA + GG SS P P +P
Sbjct: 63 GVELGWFNDSAAAITSTSPSYPGGGSSSPSPSSP 96
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 420 SVSGTDPSTERSDCPGSPAGHRAPSPGDETCSTVSKL*TDLP 295
S SG + TE+ D P S + AP+ + + K D+P
Sbjct: 578 SDSGIESGTEKPDKPASSSASSAPTSVCSSPRSEDKEVEDMP 619
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +1
Query: 508 PGRLWSRSSKRVWSRASESPTSTRSSWRGCCSTRLSS 618
P W +S A +SP + SS CS ++S
Sbjct: 470 PAASWGSASDVTLDEAVKSPLGSVSSTESTCSGEVAS 506
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 57 YF*NLDNRLQKRFN*NFNF 1
Y L NR+QK N +FNF
Sbjct: 380 YMLALSNRMQKIINNDFNF 398
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 236 KREGSRRSYNQQN*GRSRNEGRSVHN 313
KR G+R++ NQ N + VH+
Sbjct: 514 KRNGNRQNDNQNNQNDNNRNDNQVHH 539
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 239 VSVNIGTVDVSVANVNGILDCLRHLAWLR 153
V VN G V + NVN ++ WLR
Sbjct: 52 VHVNFGLAFVQLINVNEKNQIMKSNVWLR 80
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 57 YF*NLDNRLQKRFN*NFNF 1
Y L NR+QK N +FNF
Sbjct: 378 YMLALSNRMQKIVNNDFNF 396
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 45 LDNRLQKRFN*NFNF 1
L NR+QK N +FNF
Sbjct: 379 LSNRMQKIVNDDFNF 393
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 45 LDNRLQKRFN*NFNF 1
L N++QK N +FNF
Sbjct: 381 LSNKMQKMVNNDFNF 395
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 598 CSTRLSSRSSIRW 636
CS R S+ S +RW
Sbjct: 19 CSVRCSAASGLRW 31
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 45 LDNRLQKRFN*NFNF 1
L N++QK N +FNF
Sbjct: 381 LSNKMQKMVNNDFNF 395
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 45 LDNRLQKRFN*NFNF 1
L N++QK N +FNF
Sbjct: 381 LSNKMQKMVNNDFNF 395
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,455
Number of Sequences: 438
Number of extensions: 4359
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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