Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3f08
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145600-1|AAD38575.1| 227|Drosophila melanogaster ubiquitin ca... 193 2e-49
AE014134-356|AAF51291.1| 227|Drosophila melanogaster CG4265-PA ... 193 2e-49
X69679-1|CAA49359.1| 227|Drosophila melanogaster ubiquitin carb... 190 1e-48
X69678-1|CAA49358.1| 227|Drosophila melanogaster Ubiquitin carb... 190 1e-48
S60346-1|AAA15411.1| 227|Drosophila melanogaster ubiquitin carb... 190 1e-48
BT001294-1|AAN71049.1| 324|Drosophila melanogaster AT10619p pro... 58 1e-08
AF145312-1|AAF08393.1| 324|Drosophila melanogaster 26S proteaso... 58 1e-08
AF132567-1|AAD27866.1| 324|Drosophila melanogaster LD24440p pro... 58 1e-08
AE014296-1671|AAF50257.1| 324|Drosophila melanogaster CG3431-PA... 58 1e-08
AY047515-1|AAK77247.1| 471|Drosophila melanogaster GH01941p pro... 50 3e-06
AE013599-2214|AAO41384.1| 471|Drosophila melanogaster CG8445-PB... 50 3e-06
AE013599-2213|AAF58046.1| 471|Drosophila melanogaster CG8445-PA... 50 3e-06
AY089303-1|AAL90041.1| 340|Drosophila melanogaster AT10439p pro... 47 3e-05
AE014298-1747|AAF48139.1| 340|Drosophila melanogaster CG1950-PA... 47 3e-05
AY119533-1|AAM50187.1| 1058|Drosophila melanogaster GH18077p pro... 31 1.1
AE014134-2086|AAF53112.4| 1058|Drosophila melanogaster CG6614-PA... 31 1.1
U02078-1|AAC47955.1| 733|Drosophila melanogaster tartan protein... 30 3.4
AY051439-1|AAK92863.1| 737|Drosophila melanogaster GH10871p pro... 30 3.4
AE014296-2248|AAF49839.1| 737|Drosophila melanogaster CG11280-P... 30 3.4
BT024208-1|ABC86270.1| 887|Drosophila melanogaster RE41602p pro... 29 7.9
AE014297-4288|AAN14304.2| 983|Drosophila melanogaster CG33553-P... 29 7.9
>AF145600-1|AAD38575.1| 227|Drosophila melanogaster ubiquitin
carboxy-terminal hydrolaseprotein.
Length = 227
Score = 193 bits (470), Expect = 2e-49
Identities = 90/184 (48%), Positives = 124/184 (67%)
Frame = +1
Query: 133 TLVPLESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYEN 312
T PLESNP+VL K++ KLGV W++ DV+GL+ +TL W+PRPV + +LLFP S+ YE
Sbjct: 3 TWTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEK 62
Query: 313 HKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGHMQKFLNE 492
H+ E + I ++ ++FYM+Q NACGT+AL+HSVANN + +++ G ++ FL +
Sbjct: 63 HRAEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKE-VDIDRGVLKDFLEK 121
Query: 493 AKGLDATARGKLLEKSEGIINAHKELAQEGQTNTPSAEDPVNHHFISFVQKDGALYELDG 672
L RG+ LEK E H+ LAQEGQTN + E V HHFI+ V K+G LYELDG
Sbjct: 122 TASLSPEERGRALEKDEKFTADHEALAQEGQTNAANHE-KVIHHFIALVNKEGTLYELDG 180
Query: 673 RKAF 684
RK+F
Sbjct: 181 RKSF 184
>AE014134-356|AAF51291.1| 227|Drosophila melanogaster CG4265-PA
protein.
Length = 227
Score = 193 bits (470), Expect = 2e-49
Identities = 90/184 (48%), Positives = 124/184 (67%)
Frame = +1
Query: 133 TLVPLESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYEN 312
T PLESNP+VL K++ KLGV W++ DV+GL+ +TL W+PRPV + +LLFP S+ YE
Sbjct: 3 TWTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEK 62
Query: 313 HKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGHMQKFLNE 492
H+ E + I ++ ++FYM+Q NACGT+AL+HSVANN + +++ G ++ FL +
Sbjct: 63 HRAEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKE-VDIDRGVLKDFLEK 121
Query: 493 AKGLDATARGKLLEKSEGIINAHKELAQEGQTNTPSAEDPVNHHFISFVQKDGALYELDG 672
L RG+ LEK E H+ LAQEGQTN + E V HHFI+ V K+G LYELDG
Sbjct: 122 TASLSPEERGRALEKDEKFTADHEALAQEGQTNAANHE-KVIHHFIALVNKEGTLYELDG 180
Query: 673 RKAF 684
RK+F
Sbjct: 181 RKSF 184
>X69679-1|CAA49359.1| 227|Drosophila melanogaster ubiquitin
carboxyl terminal hydrolaseprotein.
Length = 227
Score = 190 bits (464), Expect = 1e-48
Identities = 89/184 (48%), Positives = 123/184 (66%)
Frame = +1
Query: 133 TLVPLESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYEN 312
T PLESNP+VL K++ KL V W++ DV+GL+ +TL W+PRPV + +LLFP S+ YE
Sbjct: 3 TWTPLESNPEVLTKYIHKLAVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEK 62
Query: 313 HKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGHMQKFLNE 492
H+ E + I ++ ++FYM+Q NACGT+AL+HSVANN + +++ G ++ FL +
Sbjct: 63 HRTEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKE-VDIDRGVLKDFLEK 121
Query: 493 AKGLDATARGKLLEKSEGIINAHKELAQEGQTNTPSAEDPVNHHFISFVQKDGALYELDG 672
L RG+ LEK E H+ LAQEGQTN + E V HHFI+ V K+G LYELDG
Sbjct: 122 TASLSPEERGRALEKDEKFTADHEALAQEGQTNAANHE-KVIHHFIALVNKEGTLYELDG 180
Query: 673 RKAF 684
RK+F
Sbjct: 181 RKSF 184
>X69678-1|CAA49358.1| 227|Drosophila melanogaster Ubiquitin
carboxyl terminal hydrolaseprotein.
Length = 227
Score = 190 bits (464), Expect = 1e-48
Identities = 89/184 (48%), Positives = 123/184 (66%)
Frame = +1
Query: 133 TLVPLESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYEN 312
T PLESNP+VL K++ KL V W++ DV+GL+ +TL W+PRPV + +LLFP S+ YE
Sbjct: 3 TWTPLESNPEVLTKYIHKLAVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEK 62
Query: 313 HKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGHMQKFLNE 492
H+ E + I ++ ++FYM+Q NACGT+AL+HSVANN + +++ G ++ FL +
Sbjct: 63 HRTEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKE-VDIDRGVLKDFLEK 121
Query: 493 AKGLDATARGKLLEKSEGIINAHKELAQEGQTNTPSAEDPVNHHFISFVQKDGALYELDG 672
L RG+ LEK E H+ LAQEGQTN + E V HHFI+ V K+G LYELDG
Sbjct: 122 TASLSPEERGRALEKDEKFTADHEALAQEGQTNAANHE-KVIHHFIALVNKEGTLYELDG 180
Query: 673 RKAF 684
RK+F
Sbjct: 181 RKSF 184
>S60346-1|AAA15411.1| 227|Drosophila melanogaster ubiquitin
carboxyl terminal hydrolaseprotein.
Length = 227
Score = 190 bits (464), Expect = 1e-48
Identities = 89/184 (48%), Positives = 123/184 (66%)
Frame = +1
Query: 133 TLVPLESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYEN 312
T PLESNP+VL K++ KL V W++ DV+GL+ +TL W+PRPV + +LLFP S+ YE
Sbjct: 3 TWTPLESNPEVLTKYIHKLAVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEK 62
Query: 313 HKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGHMQKFLNE 492
H+ E + I ++ ++FYM+Q NACGT+AL+HSVANN + +++ G ++ FL +
Sbjct: 63 HRTEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKE-VDIDRGVLKDFLEK 121
Query: 493 AKGLDATARGKLLEKSEGIINAHKELAQEGQTNTPSAEDPVNHHFISFVQKDGALYELDG 672
L RG+ LEK E H+ LAQEGQTN + E V HHFI+ V K+G LYELDG
Sbjct: 122 TASLSPEERGRALEKDEKFTADHEALAQEGQTNAANHE-KVIHHFIALVNKEGTLYELDG 180
Query: 673 RKAF 684
RK+F
Sbjct: 181 RKSF 184
>BT001294-1|AAN71049.1| 324|Drosophila melanogaster AT10619p
protein.
Length = 324
Score = 57.6 bits (133), Expect = 1e-08
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 5/181 (2%)
Frame = +1
Query: 145 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 324
+ES+P V + +++ G + ++ LD E+ + P+ ++ LF K
Sbjct: 11 IESDPGVFTELIREFGCDGA-QVEEIWSLDSESFKNL-EPIHGLIFLF---------KWV 59
Query: 325 EENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGH-MQKFLNEAKG 501
+E+E K NIF+ KQ I+NAC T A++ S+ N D ++ G + F +
Sbjct: 60 QEDEPAGKVVLDRENIFFAKQVINNACATQAIL-SLLMNLDHEDIKLGETLTNFKEFCQC 118
Query: 502 LDATARGKLLEKSEGIINAHKELAQ----EGQTNTPSAEDPVNHHFISFVQKDGALYELD 669
D +G L + I H A+ E T +D V +HF+ ++ G LYELD
Sbjct: 119 FDPYNKGLTLSNASQIRTVHNSFARPTLFELDTKNQKKDDDV-YHFVGYMPIGGRLYELD 177
Query: 670 G 672
G
Sbjct: 178 G 178
>AF145312-1|AAF08393.1| 324|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p37A protein.
Length = 324
Score = 57.6 bits (133), Expect = 1e-08
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 5/181 (2%)
Frame = +1
Query: 145 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 324
+ES+P V + +++ G + ++ LD E+ + P+ ++ LF K
Sbjct: 11 IESDPGVFTELIREFGCDGA-QVEEIWSLDSESFKNL-EPIHGLIFLF---------KWV 59
Query: 325 EENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGH-MQKFLNEAKG 501
+E+E K NIF+ KQ I+NAC T A++ S+ N D ++ G + F +
Sbjct: 60 QEDEPAGKVVLDRENIFFAKQVINNACATQAIL-SLLMNLDHEDIKLGETLTNFKEFCQC 118
Query: 502 LDATARGKLLEKSEGIINAHKELAQ----EGQTNTPSAEDPVNHHFISFVQKDGALYELD 669
D +G L + I H A+ E T +D V +HF+ ++ G LYELD
Sbjct: 119 FDPYNKGLTLSNASQIRTVHNSFARPTLFELDTKNQKKDDDV-YHFVGYMPIGGRLYELD 177
Query: 670 G 672
G
Sbjct: 178 G 178
>AF132567-1|AAD27866.1| 324|Drosophila melanogaster LD24440p
protein.
Length = 324
Score = 57.6 bits (133), Expect = 1e-08
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 5/181 (2%)
Frame = +1
Query: 145 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 324
+ES+P V + +++ G + ++ LD E+ + P+ ++ LF K
Sbjct: 11 IESDPGVFTELIREFGCDGA-QVEEIWSLDSESFKNL-EPIHGLIFLF---------KWV 59
Query: 325 EENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGH-MQKFLNEAKG 501
+E+E K NIF+ KQ I+NAC T A++ S+ N D ++ G + F +
Sbjct: 60 QEDEPAGKVVLDRENIFFAKQVINNACATQAIL-SLLMNLDHEDIKLGETLTNFKEFCQC 118
Query: 502 LDATARGKLLEKSEGIINAHKELAQ----EGQTNTPSAEDPVNHHFISFVQKDGALYELD 669
D +G L + I H A+ E T +D V +HF+ ++ G LYELD
Sbjct: 119 FDPYNKGLTLSNASQIRTVHNSFARPTLFELDTKNQKKDDDV-YHFVGYMPIGGRLYELD 177
Query: 670 G 672
G
Sbjct: 178 G 178
>AE014296-1671|AAF50257.1| 324|Drosophila melanogaster CG3431-PA
protein.
Length = 324
Score = 57.6 bits (133), Expect = 1e-08
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 5/181 (2%)
Frame = +1
Query: 145 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 324
+ES+P V + +++ G + ++ LD E+ + P+ ++ LF K
Sbjct: 11 IESDPGVFTELIREFGCDGA-QVEEIWSLDSESFKNL-EPIHGLIFLF---------KWV 59
Query: 325 EENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGH-MQKFLNEAKG 501
+E+E K NIF+ KQ I+NAC T A++ S+ N D ++ G + F +
Sbjct: 60 QEDEPAGKVVLDRENIFFAKQVINNACATQAIL-SLLMNLDHEDIKLGETLTNFKEFCQC 118
Query: 502 LDATARGKLLEKSEGIINAHKELAQ----EGQTNTPSAEDPVNHHFISFVQKDGALYELD 669
D +G L + I H A+ E T +D V +HF+ ++ G LYELD
Sbjct: 119 FDPYNKGLTLSNASQIRTVHNSFARPTLFELDTKNQKKDDDV-YHFVGYMPIGGRLYELD 177
Query: 670 G 672
G
Sbjct: 178 G 178
>AY047515-1|AAK77247.1| 471|Drosophila melanogaster GH01941p
protein.
Length = 471
Score = 50.0 bits (114), Expect = 3e-06
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 11/191 (5%)
Frame = +1
Query: 145 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 324
LES+P + L+ G + + +V L + P + L I + K
Sbjct: 49 LESDPGLFTLLLKDFGCHDV-QVEEVYDLQKP----IESPYGFIFLFRWIEERRARRKIV 103
Query: 325 EEN-EILSKGQEVSGNIFYMKQNISNACGTIALVHSVAN-NTDIIELSDGHMQKFLNEAK 498
E EI K +E +IF+ +Q + N+C T AL+ + N N + ++L D + + K
Sbjct: 104 ETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDT-LSRLKTHTK 162
Query: 499 GLDATARGKLLEKSEGIINAH---------KELAQEGQTNTPSAEDPVNHHFISFVQKDG 651
G+ +G + + + AH + L + G + HF+SFV +G
Sbjct: 163 GMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPING 222
Query: 652 ALYELDGRKAF 684
L+ELDG K +
Sbjct: 223 QLFELDGLKPY 233
>AE013599-2214|AAO41384.1| 471|Drosophila melanogaster CG8445-PB,
isoform B protein.
Length = 471
Score = 50.0 bits (114), Expect = 3e-06
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 11/191 (5%)
Frame = +1
Query: 145 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 324
LES+P + L+ G + + +V L + P + L I + K
Sbjct: 49 LESDPGLFTLLLKDFGCHDV-QVEEVYDLQKP----IESPYGFIFLFRWIEERRARRKIV 103
Query: 325 EEN-EILSKGQEVSGNIFYMKQNISNACGTIALVHSVAN-NTDIIELSDGHMQKFLNEAK 498
E EI K +E +IF+ +Q + N+C T AL+ + N N + ++L D + + K
Sbjct: 104 ETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDT-LSRLKTHTK 162
Query: 499 GLDATARGKLLEKSEGIINAH---------KELAQEGQTNTPSAEDPVNHHFISFVQKDG 651
G+ +G + + + AH + L + G + HF+SFV +G
Sbjct: 163 GMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPING 222
Query: 652 ALYELDGRKAF 684
L+ELDG K +
Sbjct: 223 QLFELDGLKPY 233
>AE013599-2213|AAF58046.1| 471|Drosophila melanogaster CG8445-PA,
isoform A protein.
Length = 471
Score = 50.0 bits (114), Expect = 3e-06
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 11/191 (5%)
Frame = +1
Query: 145 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 324
LES+P + L+ G + + +V L + P + L I + K
Sbjct: 49 LESDPGLFTLLLKDFGCHDV-QVEEVYDLQKP----IESPYGFIFLFRWIEERRARRKIV 103
Query: 325 EEN-EILSKGQEVSGNIFYMKQNISNACGTIALVHSVAN-NTDIIELSDGHMQKFLNEAK 498
E EI K +E +IF+ +Q + N+C T AL+ + N N + ++L D + + K
Sbjct: 104 ETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDT-LSRLKTHTK 162
Query: 499 GLDATARGKLLEKSEGIINAH---------KELAQEGQTNTPSAEDPVNHHFISFVQKDG 651
G+ +G + + + AH + L + G + HF+SFV +G
Sbjct: 163 GMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPING 222
Query: 652 ALYELDGRKAF 684
L+ELDG K +
Sbjct: 223 QLFELDGLKPY 233
>AY089303-1|AAL90041.1| 340|Drosophila melanogaster AT10439p
protein.
Length = 340
Score = 46.8 bits (106), Expect = 3e-05
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Frame = +1
Query: 367 NIFYMKQNISNACGTIALVHSVAN-NTDIIELSDGHMQKFLNEAKGLDATARGKLLEKSE 543
+IF+ +Q I NAC T AL+ + N + I+L + N + LD RG L E
Sbjct: 90 DIFFARQVIPNACATQALLCLLLNLEHEDIDLGQT-LTDLRNLCQDLDPECRGHRLANEE 148
Query: 544 GIINAHKELAQEG----QTNTPSAEDPVNHHFISFVQKDGALYELDG 672
I H A+ + +T ED +HF+ F+ G L+ELDG
Sbjct: 149 KIRKVHNSFARPELFVVEESTDFIEDDC-YHFVGFMPIKGKLFELDG 194
>AE014298-1747|AAF48139.1| 340|Drosophila melanogaster CG1950-PA
protein.
Length = 340
Score = 46.8 bits (106), Expect = 3e-05
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Frame = +1
Query: 367 NIFYMKQNISNACGTIALVHSVAN-NTDIIELSDGHMQKFLNEAKGLDATARGKLLEKSE 543
+IF+ +Q I NAC T AL+ + N + I+L + N + LD RG L E
Sbjct: 90 DIFFARQVIPNACATQALLCLLLNLQHEDIDLGQT-LTDLRNLCQDLDPECRGHRLANEE 148
Query: 544 GIINAHKELAQEG----QTNTPSAEDPVNHHFISFVQKDGALYELDG 672
I H A+ + +T ED +HF+ F+ G L+ELDG
Sbjct: 149 KIRKVHNSFARPELFVVEESTDFIEDDC-YHFVGFMPIKGKLFELDG 194
>AY119533-1|AAM50187.1| 1058|Drosophila melanogaster GH18077p protein.
Length = 1058
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -2
Query: 373 KYFQKLLALWTESHFLQFFCDFRKHQKLGKVALQKAQGEVPTKAFQDQVP 224
KYFQ+LL++ L F F + LG++ALQ+ Q E+ KAF +P
Sbjct: 900 KYFQELLSVVDPMDNLLFKLSFLR---LGQLALQRKQYELAEKAFNICLP 946
>AE014134-2086|AAF53112.4| 1058|Drosophila melanogaster CG6614-PA
protein.
Length = 1058
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -2
Query: 373 KYFQKLLALWTESHFLQFFCDFRKHQKLGKVALQKAQGEVPTKAFQDQVP 224
KYFQ+LL++ L F F + LG++ALQ+ Q E+ KAF +P
Sbjct: 900 KYFQELLSVVDPMDNLLFKLSFLR---LGQLALQRKQYELAEKAFNICLP 946
>U02078-1|AAC47955.1| 733|Drosophila melanogaster tartan protein
protein.
Length = 733
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 543 RHH*CSQGIGSRRPNKYTKC*RSRQPSFYQLCP 641
+HH CS GI S PN YT Y +CP
Sbjct: 500 QHHPCSLGIHSTFPNTYTAPHHPGATHHYGMCP 532
>AY051439-1|AAK92863.1| 737|Drosophila melanogaster GH10871p
protein.
Length = 737
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 543 RHH*CSQGIGSRRPNKYTKC*RSRQPSFYQLCP 641
+HH CS GI S PN YT Y +CP
Sbjct: 504 QHHPCSLGIHSTFPNTYTAPHHPGATHHYGMCP 536
>AE014296-2248|AAF49839.1| 737|Drosophila melanogaster CG11280-PA
protein.
Length = 737
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 543 RHH*CSQGIGSRRPNKYTKC*RSRQPSFYQLCP 641
+HH CS GI S PN YT Y +CP
Sbjct: 504 QHHPCSLGIHSTFPNTYTAPHHPGATHHYGMCP 536
>BT024208-1|ABC86270.1| 887|Drosophila melanogaster RE41602p
protein.
Length = 887
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 247 SWVPRPVLSVMLLFPISDAYENHKKTE 327
SW P+P+ +L P +D NH+K +
Sbjct: 502 SWAPKPLYPDRVLLPPADGNNNHQKQQ 528
>AE014297-4288|AAN14304.2| 983|Drosophila melanogaster CG33553-PE,
isoform E protein.
Length = 983
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 247 SWVPRPVLSVMLLFPISDAYENHKKTE 327
SW P+P+ +L P +D NH+K +
Sbjct: 502 SWAPKPLYPDRVLLPPADGNNNHQKQQ 528
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,805,696
Number of Sequences: 53049
Number of extensions: 604004
Number of successful extensions: 1787
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1768
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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