Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3f07
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative odorant-b...    26   1.4  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   2.5  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   5.7  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.5  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.9  

>AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative
           odorant-binding protein OBPjj12 protein.
          Length = 119

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = -2

Query: 298 DYVCILTARQNILVIRTSLMPKLCHSARSPSLVVSPGSLACF--CFI 164
           D VC+L     +   R SL P +  S R+ +  V    + CF  CF+
Sbjct: 5   DLVCLLAIVLLVHSCRMSLKPSVFESLRAGNFSVRNSLVECFGECFV 51


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 408 SHRDSRAFAESGLSNAVGAGSLTSVMRRPPTLLAR 304
           +H+  R    S L+  VG G  ++  R+PPT L R
Sbjct: 176 AHQRDRDVLNSLLAAKVGGGQPSASPRQPPTPLPR 210


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 224 MTELWHKRRPDDEDILSSCQDAYIIPLR 307
           MT +  KR+ D+  +L+    AY+ P++
Sbjct: 1   MTNVTRKRKVDENSLLADGVTAYLSPIQ 28


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 103  QRSHSKRAPSITPLPDH 153
            QRSH++  P + P P H
Sbjct: 1099 QRSHTQAGPRVVPDPAH 1115


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +2

Query: 26   RKDVNISNRMSPAASFAERWARDNLSREATVSELQVLRLFPITCD 160
            R+D+  + R +    + E W  D L ++A+       R+ P   D
Sbjct: 922  REDIRATERQNTIDCWQEEWDADALQQDASRHTRWTHRVIPSVGD 966


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,988
Number of Sequences: 2352
Number of extensions: 16191
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)