Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3f07
         (740 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY258142-1|AAP45947.1|  737|Homo sapiens small-conductance calci...    32   2.5  
AY049734-1|AAL10706.1|  737|Homo sapiens small-conductance calci...    32   2.5  
AL954342-3|CAH72739.1|  731|Homo sapiens potassium intermediate/...    32   2.5  
AL606500-5|CAH71911.1|  731|Homo sapiens potassium intermediate/...    32   2.5  
AL390204-3|CAH71151.1|  731|Homo sapiens potassium intermediate/...    32   2.5  
AJ251016-1|CAB61331.1|  736|Homo sapiens SK3 protein protein.          32   2.5  
AF336797-1|AAK15345.1|  736|Homo sapiens small-conductance calci...    32   2.5  
AF031815-1|AAC26099.1|  731|Homo sapiens calcium-activated potas...    32   2.5  
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.               31   4.3  
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592...    31   4.3  
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592...    31   4.3  
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592...    31   4.3  

>AY258142-1|AAP45947.1|  737|Homo sapiens small-conductance
           calcium-activated potassium channel SK3 protein.
          Length = 737

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 471 SMKTTSSPGVGSSRSLMSKIISHRDSRAFAESGLSNAVGAGSLTSVMRR 325
           S   TS PG GS     S ++  RDS  F E  +S+   +G +   + R
Sbjct: 148 SSTATSGPGGGSRHRQASPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSR 196


>AY049734-1|AAL10706.1|  737|Homo sapiens small-conductance
           calcium-activated potassium channel SK3 protein.
          Length = 737

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 471 SMKTTSSPGVGSSRSLMSKIISHRDSRAFAESGLSNAVGAGSLTSVMRR 325
           S   TS PG GS     S ++  RDS  F E  +S+   +G +   + R
Sbjct: 148 SSTATSGPGGGSRHRQASPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSR 196


>AL954342-3|CAH72739.1|  731|Homo sapiens potassium
           intermediate/small conductance calcium-activated
           channel, subfamily N protein.
          Length = 731

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 471 SMKTTSSPGVGSSRSLMSKIISHRDSRAFAESGLSNAVGAGSLTSVMRR 325
           S   TS PG GS     S ++  RDS  F E  +S+   +G +   + R
Sbjct: 142 SSTATSGPGGGSRHRQASPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSR 190


>AL606500-5|CAH71911.1|  731|Homo sapiens potassium
           intermediate/small conductance calcium-activated
           channel, subfamily N protein.
          Length = 731

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 471 SMKTTSSPGVGSSRSLMSKIISHRDSRAFAESGLSNAVGAGSLTSVMRR 325
           S   TS PG GS     S ++  RDS  F E  +S+   +G +   + R
Sbjct: 142 SSTATSGPGGGSRHRQASPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSR 190


>AL390204-3|CAH71151.1|  731|Homo sapiens potassium
           intermediate/small conductance calcium-activated
           channel, subfamily N protein.
          Length = 731

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 471 SMKTTSSPGVGSSRSLMSKIISHRDSRAFAESGLSNAVGAGSLTSVMRR 325
           S   TS PG GS     S ++  RDS  F E  +S+   +G +   + R
Sbjct: 142 SSTATSGPGGGSRHRQASPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSR 190


>AJ251016-1|CAB61331.1|  736|Homo sapiens SK3 protein protein.
          Length = 736

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 471 SMKTTSSPGVGSSRSLMSKIISHRDSRAFAESGLSNAVGAGSLTSVMRR 325
           S   TS PG GS     S ++  RDS  F E  +S+   +G +   + R
Sbjct: 147 SSTATSGPGGGSRHRQASPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSR 195


>AF336797-1|AAK15345.1|  736|Homo sapiens small-conductance
           calcium-activated potassium channel protein.
          Length = 736

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 471 SMKTTSSPGVGSSRSLMSKIISHRDSRAFAESGLSNAVGAGSLTSVMRR 325
           S   TS PG GS     S ++  RDS  F E  +S+   +G +   + R
Sbjct: 147 SSTATSGPGGGSRHRQASPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSR 195


>AF031815-1|AAC26099.1|  731|Homo sapiens calcium-activated
           potassium channel protein.
          Length = 731

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 471 SMKTTSSPGVGSSRSLMSKIISHRDSRAFAESGLSNAVGAGSLTSVMRR 325
           S   TS PG GS     S ++  RDS  F E  +S+   +G +   + R
Sbjct: 142 SSTATSGPGGGSRHRQASPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSR 190


>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
          Length = 1317

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -2

Query: 547  HAPDEVLPVRSSEMIFNVRRLKVAHVYENYFFTRSRIFSEPD 422
            H P +++   S EM+FN +R    H Y+N   T+  +F  P+
Sbjct: 905  HRPSQLIYKCSCEMVFNKKRHIQQHFYQNVSKTQVGVFKCPE 946


>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
           protein.
          Length = 1267

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -2

Query: 547 HAPDEVLPVRSSEMIFNVRRLKVAHVYENYFFTRSRIFSEPD 422
           H P +++   S EM+FN +R    H Y+N   T+  +F  P+
Sbjct: 855 HRPSQLIYKCSCEMVFNKKRHIQQHFYQNVSKTQVGVFKCPE 896


>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
           protein.
          Length = 1267

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -2

Query: 547 HAPDEVLPVRSSEMIFNVRRLKVAHVYENYFFTRSRIFSEPD 422
           H P +++   S EM+FN +R    H Y+N   T+  +F  P+
Sbjct: 855 HRPSQLIYKCSCEMVFNKKRHIQQHFYQNVSKTQVGVFKCPE 896


>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
           protein.
          Length = 1267

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -2

Query: 547 HAPDEVLPVRSSEMIFNVRRLKVAHVYENYFFTRSRIFSEPD 422
           H P +++   S EM+FN +R    H Y+N   T+  +F  P+
Sbjct: 855 HRPSQLIYKCSCEMVFNKKRHIQQHFYQNVSKTQVGVFKCPE 896


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,785,418
Number of Sequences: 237096
Number of extensions: 2413711
Number of successful extensions: 5044
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5044
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)