Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3f06
         (269 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.25 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    19   7.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    19   7.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    19   9.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    19   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.25
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -2

Query: 115 LYYYY*VQLIFCSLII---*HFLYIK*ILFF 32
           +YY+Y + L+FC   I    H L++  I +F
Sbjct: 258 IYYFYYMHLLFCCAFIIFTMHLLFLLCIYYF 288


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 133 LFTKYWLYY 107
           LFT Y++YY
Sbjct: 153 LFTVYYIYY 161


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 139 KYYVYRVMCIDLS 177
           KYY   V C++LS
Sbjct: 54  KYYWLNVCCLNLS 66


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 19.0 bits (37), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 91  LIFCSLII*HFL 56
           +IF S++I HFL
Sbjct: 124 IIFLSILIPHFL 135


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 19.0 bits (37), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 91  LIFCSLII*HFL 56
           +IF S++I HFL
Sbjct: 124 IIFLSILIPHFL 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,832
Number of Sequences: 336
Number of extensions: 666
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4485306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)