Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3f04
(789 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding pr... 29 0.16
AF393487-1|AAL60412.1| 304|Anopheles gambiae odorant binding pr... 29 0.22
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 28 0.38
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 27 0.66
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 25 2.7
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 24 6.2
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 24 6.2
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 24 6.2
AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 24 6.2
AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 24 6.2
>AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding
protein AgamOBP31 protein.
Length = 313
Score = 29.1 bits (62), Expect = 0.16
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 188 RYWRRYSCIWSVSSHISYCR-FFGEHSFEKSFIKTSRSYRCLY--IHTSIIPSNICSIHN 358
R+W +C V + ++Y + G+ +EK R+ CL +HT+ +P+N C +
Sbjct: 77 RWWNN-TCGLQVPAIMNYFQPVLGDRQYEK------RTSECLERNVHTAELPNNCCQAYE 129
Query: 359 SVNCHKR 379
+ C+ R
Sbjct: 130 TFQCYFR 136
>AF393487-1|AAL60412.1| 304|Anopheles gambiae odorant binding
protein 1 protein.
Length = 304
Score = 28.7 bits (61), Expect = 0.22
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +2
Query: 188 RYWRRYSCIWSVSSHISYCR-FFGEHSFEKSFIKTSRSYRCLY--IHTSIIPSNICSIHN 358
R+W +C V ++Y + G+ +EK R+ CL +HT+ +P+N C +
Sbjct: 77 RWWNN-TCGLQVPEIMNYFQPVLGDRQYEK------RTSECLERNVHTAELPNNCCQAYE 129
Query: 359 SVNCHKR 379
+ C+ R
Sbjct: 130 TFQCYFR 136
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 27.9 bits (59), Expect = 0.38
Identities = 13/62 (20%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 200 RYSC-IWSVSSHISYCRFFGEHSFEKSFIKTSRSYRCLYIHTSIIPSNICSIHNSVNCHK 376
RY+ +W+ ++ + CR + K+ I+ +R++R + T+ + + + I + +N
Sbjct: 848 RYAAPVWAEATQVRECRRMLQRVQRKAAIRVARAFRTVRYETATLLAGLVPICHLINEDA 907
Query: 377 RI 382
R+
Sbjct: 908 RV 909
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 27.1 bits (57), Expect = 0.66
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 200 RYSC-IWSVSSHISYCRFFGEHSFEKSFIKTSRSYRCLYIHTSIIPSNICSIHNSVNCHK 376
RY+ +W + CR + K+ I+ +R++R + T+++P+ + I +V
Sbjct: 803 RYAAPVWHGALTNRECRSLLKRVQRKAAIRVARTFRTVRYETAVLPAGLVPICRAVAEDT 862
Query: 377 RIPTGPRNGSTNS 415
R+ + G ++S
Sbjct: 863 RVHSRRGTGVSSS 875
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 25.0 bits (52), Expect = 2.7
Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 200 RYSC-IWSVSSHISYCRFFGEHSFEKSFIKTSRSYRCLYIHTSIIPSNICSIHNSV 364
RY+ +W + + CR E KS I +R++R + T+++ + + I ++
Sbjct: 808 RYAAPVWHEALNTRECRRLLERVQRKSAIAVARTFRTVRYETAVLLAGLLPICRAI 863
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 6.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 544 YWVIVNFINSGY 509
YWV V F N GY
Sbjct: 94 YWVYVQFANEGY 105
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 6.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 544 YWVIVNFINSGY 509
YWV V F N GY
Sbjct: 94 YWVYVQFANEGY 105
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 6.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 544 YWVIVNFINSGY 509
YWV V F N GY
Sbjct: 94 YWVYVQFANEGY 105
>AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein.
Length = 187
Score = 23.8 bits (49), Expect = 6.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 544 YWVIVNFINSGY 509
YWV V F N GY
Sbjct: 94 YWVYVQFANEGY 105
>AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 6.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 544 YWVIVNFINSGY 509
YWV V F N GY
Sbjct: 94 YWVYVQFANEGY 105
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,079
Number of Sequences: 2352
Number of extensions: 17536
Number of successful extensions: 80
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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