Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3f04
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026202-6|AAB71245.2| 594|Caenorhabditis elegans Hypothetical ... 66 4e-11
U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical p... 62 6e-10
AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical ... 49 3e-06
AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned expre... 46 4e-05
U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned expre... 46 4e-05
U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned expre... 46 4e-05
Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 35 0.076
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 35 0.076
Z81537-9|CAB04376.2| 673|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z81537-5|CAB04381.2| 673|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 30 2.2
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 30 2.2
Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical p... 29 3.8
U58749-2|AAK18876.1| 355|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF016676-6|AAG24108.1| 354|Caenorhabditis elegans Seven tm rece... 29 5.0
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa... 28 8.8
AF125963-3|AAD14744.2| 356|Caenorhabditis elegans Serpentine re... 28 8.8
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as... 28 8.8
>AF026202-6|AAB71245.2| 594|Caenorhabditis elegans Hypothetical
protein C10E2.6 protein.
Length = 594
Score = 65.7 bits (153), Expect = 4e-11
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 1/193 (0%)
Frame = +3
Query: 63 VPPEGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVTLAI 242
+PP+GGWG+VV +G + + FG + ++E
Sbjct: 16 LPPDGGWGWVVVLGSFFVHVFADGFVYSFGVLVETLMEEFHASNTMAALIISLLTGLTLG 75
Query: 243 AGFSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVS 422
+G A+ R + GA + + L+ F + +++T G + G G GL+ +
Sbjct: 76 SGPLASAVCNKYGCRITTITGAGVAFVGCALSYFATAMWHIVITVGVIMGTGFGLMYCPA 135
Query: 423 YTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGT-LAIICAISAHSIF 599
YF K+ L + A G+ T+L+ F I YG+R LA + + ++
Sbjct: 136 IVIVTMYFENKRSLATGIAVAGAGVGTVLFAPINAFFINNYGWRSVFLAFLFILVLCALC 195
Query: 600 GALVMHPVQWYMV 638
GA P+++ +V
Sbjct: 196 GA-TFAPLEFALV 207
>U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical
protein T02G5.12 protein.
Length = 556
Score = 61.7 bits (143), Expect = 6e-10
Identities = 38/164 (23%), Positives = 65/164 (39%)
Frame = +3
Query: 63 VPPEGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVTLAI 242
+PP+GGWG+VV +G I + FG + + E
Sbjct: 13 LPPDGGWGWVVVIGSFFIHVFADGFVYSFGILAEKLMIEFNSNNTMTSLIVSMLTGFTLG 72
Query: 243 AGFSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVS 422
AG A+ R +IGA + + L+ F +++ G + G+G GL+ +
Sbjct: 73 AGPLASAVCNKYGCRITTIIGAGVAFVGCLLSCFATEIWHFVISVGVIMGIGFGLVYCPA 132
Query: 423 YTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFR 554
YF K+ L + A G+ +++ F I+ YG+R
Sbjct: 133 IVIVTMYFESKRSLATGIAVAGAGVGAVVFGPINTFIISNYGWR 176
>AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical
protein C01B4.9 protein.
Length = 571
Score = 49.2 bits (112), Expect = 3e-06
Identities = 40/183 (21%), Positives = 77/183 (42%)
Frame = +3
Query: 60 LVPPEGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVTLA 239
+ PP+GG+G+VV ++ +A G I +
Sbjct: 37 VTPPDGGYGWVVVAASFLVNMAVDGVIYTCGKILVPIWADQFGSTSVAGAVISILTGCYY 96
Query: 240 IAGFSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPV 419
+AG A+ + +R V + G+ + T A L+ F + +L + G L G+G G +
Sbjct: 97 LAGPLASSFVNVFGIRSVAIAGSILATTAFLLSRFASTIWELYLLFGVLGGIGFGCMYLP 156
Query: 420 SYTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIF 599
S ++YF KK+ + + G+ TM++ I + Y + + + ++A +I
Sbjct: 157 SIVILSTYFAKKRSVATGIAVCGSGIGTMVFST-INGPVFDYFGKDVGSFMVYLAAIAIS 215
Query: 600 GAL 608
G+L
Sbjct: 216 GSL 218
>AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical
protein Y19D10A.12 protein.
Length = 544
Score = 49.2 bits (112), Expect = 3e-06
Identities = 40/183 (21%), Positives = 77/183 (42%)
Frame = +3
Query: 60 LVPPEGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVTLA 239
+ PP+GG+G+VV ++ +A G I +
Sbjct: 37 VTPPDGGYGWVVVAASFLVNMAVDGVIYTCGKILVPIWADQFGSTSVAGAVISILTGCYY 96
Query: 240 IAGFSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPV 419
+AG A+ + +R V + G+ + T A L+ F + +L + G L G+G G +
Sbjct: 97 LAGPLASSFVNVFGIRSVAIAGSILATTAFLLSRFASTIWELYLLFGVLGGIGFGCMYLP 156
Query: 420 SYTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIF 599
S ++YF KK+ + + G+ TM++ I + Y + + + ++A +I
Sbjct: 157 SIVILSTYFAKKRSVATGIAVCGSGIGTMVFST-INGPVFDYFGKDVGSFMVYLAAIAIS 215
Query: 600 GAL 608
G+L
Sbjct: 216 GSL 218
>Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical
protein M03B6.2 protein.
Length = 596
Score = 47.2 bits (107), Expect = 1e-05
Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 10/199 (5%)
Frame = +3
Query: 60 LVPPEGGWGYVVCVGL--------SVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXX 215
+ PP+GG+G+ + VIF G QP + +++ + E
Sbjct: 31 IAPPDGGYGWAIVAASFLLNMIVDGVIFTVGKILQPAW--VHSFGISEASAAMTMSILSG 88
Query: 216 XXFQVTLAIAGFSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGL 395
F AG A++ RQV L G+ I L L+I + L V+ G + G
Sbjct: 89 CYF-----FAGPIASVLCNVFGCRQVALAGSLIAALGFLLSISAPNIYVLYVSFGLIAGA 143
Query: 396 GMGLLIPVSYTSFNSYFTKKKVLYLSLCKASIGLITMLYPLF--IKFTITQYGFRGTLAI 569
G G++ + + YF KK+ + + G+ T ++ L + + ++ L
Sbjct: 144 GFGMMYLPAIVIISQYFAKKRSVATGIAVCGSGIGTTVFALLNDVVWDFVGGDWKQFLVY 203
Query: 570 ICAISAHSIFGALVMHPVQ 626
A++ + +++ P++
Sbjct: 204 TAAVTISGLGACILLRPLK 222
>Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical
protein C49F8.2 protein.
Length = 771
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/155 (20%), Positives = 63/155 (40%)
Frame = +3
Query: 72 EGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVTLAIAGF 251
+GG+G++V + ++ FG ++ + F I
Sbjct: 68 DGGYGWLVVLASFLMHAVCDGASFCFGIVFVKIQEHFQCGRFVSMITASMFLSLPLIMSP 127
Query: 252 SANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTS 431
A I L R +IGA I T++ +A+F +++ G G+GM + +
Sbjct: 128 VAGIVSDILGCRMSIIIGASICTVSCIIAMFCSHIFFFMISFGLGCGVGMSFIYNAAIVI 187
Query: 432 FNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTI 536
YF K++ L S + G+ T++YP+ + ++
Sbjct: 188 VTYYFEKRRGLATSFAVSGTGVGTVIYPILLNLSM 222
>U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned
expression site protein22, isoform c protein.
Length = 710
Score = 45.6 bits (103), Expect = 4e-05
Identities = 37/202 (18%), Positives = 75/202 (37%), Gaps = 2/202 (0%)
Frame = +3
Query: 60 LVP--PEGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVT 233
LVP P+GG+G+V+ + + F + + T
Sbjct: 65 LVPQAPDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQESDGLTVFIGSLIIGT 124
Query: 234 LAIAGFSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLI 413
+ G + R V + G I +A +A + ++ G + GLG G++
Sbjct: 125 YLLVGPLVSALCNKYEQRYVVMAGGLISGIAFMIAPASPNIYVFMLIYGVMGGLGFGMIY 184
Query: 414 PVSYTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHS 593
+ YF K+ + + A G+ T L PL + I G++ T+ ++ +
Sbjct: 185 LPAIVVVGFYFDSKRAMATGISVAGSGVGTFLVPLICQVCIANLGWQKTIWVLAVMIFSC 244
Query: 594 IFGALVMHPVQWYMVKKLKTCE 659
+F + P+ + +++ E
Sbjct: 245 VFYGYLYRPLPMVDLNEIRDQE 266
>U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned
expression site protein22, isoform a protein.
Length = 677
Score = 45.6 bits (103), Expect = 4e-05
Identities = 37/202 (18%), Positives = 75/202 (37%), Gaps = 2/202 (0%)
Frame = +3
Query: 60 LVP--PEGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVT 233
LVP P+GG+G+V+ + + F + + T
Sbjct: 10 LVPQAPDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQESDGLTVFIGSLIIGT 69
Query: 234 LAIAGFSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLI 413
+ G + R V + G I +A +A + ++ G + GLG G++
Sbjct: 70 YLLVGPLVSALCNKYEQRYVVMAGGLISGIAFMIAPASPNIYVFMLIYGVMGGLGFGMIY 129
Query: 414 PVSYTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHS 593
+ YF K+ + + A G+ T L PL + I G++ T+ ++ +
Sbjct: 130 LPAIVVVGFYFDSKRAMATGISVAGSGVGTFLVPLICQVCIANLGWQKTIWVLAVMIFSC 189
Query: 594 IFGALVMHPVQWYMVKKLKTCE 659
+F + P+ + +++ E
Sbjct: 190 VFYGYLYRPLPMVDLNEIRDQE 211
>U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned
expression site protein22, isoform b protein.
Length = 777
Score = 45.6 bits (103), Expect = 4e-05
Identities = 37/202 (18%), Positives = 75/202 (37%), Gaps = 2/202 (0%)
Frame = +3
Query: 60 LVP--PEGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVT 233
LVP P+GG+G+V+ + + F + + T
Sbjct: 65 LVPQAPDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQESDGLTVFIGSLIIGT 124
Query: 234 LAIAGFSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLI 413
+ G + R V + G I +A +A + ++ G + GLG G++
Sbjct: 125 YLLVGPLVSALCNKYEQRYVVMAGGLISGIAFMIAPASPNIYVFMLIYGVMGGLGFGMIY 184
Query: 414 PVSYTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHS 593
+ YF K+ + + A G+ T L PL + I G++ T+ ++ +
Sbjct: 185 LPAIVVVGFYFDSKRAMATGISVAGSGVGTFLVPLICQVCIANLGWQKTIWVLAVMIFSC 244
Query: 594 IFGALVMHPVQWYMVKKLKTCE 659
+F + P+ + +++ E
Sbjct: 245 VFYGYLYRPLPMVDLNEIRDQE 266
>Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical
protein F58A4.3 protein.
Length = 288
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -2
Query: 638 HHIPLYRMHD*SSENTVS*YGTN---NR*SPSKPVLGYR--KFYKQRVQHRYQSNRCLTQ 474
HH+P YR HD S E S GTN NR PS P G R RV+ R NR +T+
Sbjct: 129 HHMPSYRRHDSSDEENYSMDGTNGDGNRAGPSNPDRGNRTGPSSSDRVRMRAGRNR-VTK 187
Query: 473 TQ 468
T+
Sbjct: 188 TR 189
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 34.7 bits (76), Expect = 0.076
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Frame = +3
Query: 291 VGLIGAFIYTLASFLAIFVVSTTQ----LIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKK 458
V LI I+TLA+ + V+S +++ G ++I S T F+
Sbjct: 148 VNLIVTGIFTLATSVMTMVISAHHDANVVLLALAICIGCTFSIVIVASQTKFDLTAHMGY 207
Query: 459 VLYLSLCKASIGLITMLYPLF--IKFTITQYGFRGTLAII 572
+L +S+C GL+ ++ +F IKF + Y G L ++
Sbjct: 208 ILIISMCFMFFGLVVVICSMFFKIKFLMMVYALGGALIMM 247
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 34.7 bits (76), Expect = 0.076
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Frame = +3
Query: 291 VGLIGAFIYTLASFLAIFVVSTTQ----LIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKK 458
V LI I+TLA+ + V+S +++ G ++I S T F+
Sbjct: 148 VNLIVTGIFTLATSVMTMVISAHHDANVVLLALAICIGCTFSIVIVASQTKFDLTAHMGY 207
Query: 459 VLYLSLCKASIGLITMLYPLF--IKFTITQYGFRGTLAII 572
+L +S+C GL+ ++ +F IKF + Y G L ++
Sbjct: 208 ILIISMCFMFFGLVVVICSMFFKIKFLMMVYALGGALIMM 247
>Z81537-9|CAB04376.2| 673|Caenorhabditis elegans Hypothetical
protein F41D3.10 protein.
Length = 673
Score = 32.7 bits (71), Expect = 0.31
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 228 VTLAIAGFSANIALKSLSLRQVGL--IGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGM 401
VTL + GF I+ ++ L GL IG Y+L +L + V + G L +
Sbjct: 276 VTL-VTGFLMMISENNMLLSNKGLAYIGNISYSL--YLIHWPVYAYWKLTCEGDQNLLII 332
Query: 402 GLLIPVSYTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFR 554
LL + F +K YL LC SIGL+T+L L F I + F+
Sbjct: 333 ALLSSIVLAVIVHEFFEK--WYLKLCSTSIGLVTVLLILLNVFLINKEHFK 381
>Z81537-5|CAB04381.2| 673|Caenorhabditis elegans Hypothetical
protein F41D3.5 protein.
Length = 673
Score = 32.7 bits (71), Expect = 0.31
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 228 VTLAIAGFSANIALKSLSLRQVGL--IGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGM 401
VTL + GF I+ ++ L GL IG Y+L +L + V + G L +
Sbjct: 276 VTL-VTGFLMMISENNMLLSNKGLAYIGNISYSL--YLIHWPVYAYWKLTCEGDQNLLII 332
Query: 402 GLLIPVSYTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFR 554
LL + F +K YL LC SIGL+T+L L F I + F+
Sbjct: 333 ALLSSIVLAVIVHEFFEK--WYLKLCSTSIGLVTVLLILLNVFLINKEHFK 381
>Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 31.1 bits (67), Expect = 0.94
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Frame = +3
Query: 288 QVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVLY 467
++ +I T SF+ L++ F G+G GL+ + YF KK+
Sbjct: 104 RISIIAGSFLTGGSFVVGPFCKNIYLLMLATFGMGIGCGLMRNSIISIQCEYFKKKRNTV 163
Query: 468 LSLCKASIGLITMLYPLFIKFTITQYGFRGT----LAIICAISAHSIFGALVMHP 620
++ GL + P +KF + +Y G L++ +SA I G + P
Sbjct: 164 MAAISIGPGLGIFILPRTLKFIMVKYNSWGPAWWFLSLFYIVSA--IMGLFITKP 216
>Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 31.1 bits (67), Expect = 0.94
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Frame = +3
Query: 288 QVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVLY 467
++ +I T SF+ L++ F G+G GL+ + YF KK+
Sbjct: 104 RISIIAGSFLTGGSFVVGPFCKNIYLLMLATFGMGIGCGLMRNSIISIQCEYFKKKRNTV 163
Query: 468 LSLCKASIGLITMLYPLFIKFTITQYGFRGT----LAIICAISAHSIFGALVMHP 620
++ GL + P +KF + +Y G L++ +SA I G + P
Sbjct: 164 MAAISIGPGLGIFILPRTLKFIMVKYNSWGPAWWFLSLFYIVSA--IMGLFITKP 216
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical protein
F22E10.3 protein.
Length = 1327
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 225 QVTLAIAGFSANIALKSLSLRQVGLIGAFIYTLASFLAI 341
QV A+A ANIA+ + Q+G++G + L +F+ I
Sbjct: 889 QVIYALAAIIANIAIAFIYCWQIGILGTSLILLLAFVMI 927
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 225 QVTLAIAGFSANIALKSLSLRQVGLIGAFIYTLASFLAI 341
QV A+A ANIA+ + Q+G++G + L +F+ I
Sbjct: 889 QVIYALAAIIANIAIAFIYCWQIGILGTSLILLLAFVMI 927
>Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical
protein ZC168.1 protein.
Length = 807
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 237 AIAGFSANIALKSLSLRQVGLIGAFIYTLAS---FLAIFVVSTTQLIVTNGFLQGLGMGL 407
AI F+ K + L +V ++ AF T A FL + V++ + V L L +
Sbjct: 142 AICVFAVGTQTKRIELYRVFVVTAFFGTFAYIWVFLVLIVITPNVVDVWEAILTLLFFII 201
Query: 408 LIPVSYTSFNSYFTKKK 458
L+ VSY + KKK
Sbjct: 202 LVVVSYAVDAQIWKKKK 218
>Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical
protein ZC168.1 protein.
Length = 807
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 237 AIAGFSANIALKSLSLRQVGLIGAFIYTLAS---FLAIFVVSTTQLIVTNGFLQGLGMGL 407
AI F+ K + L +V ++ AF T A FL + V++ + V L L +
Sbjct: 142 AICVFAVGTQTKRIELYRVFVVTAFFGTFAYIWVFLVLIVITPNVVDVWEAILTLLFFII 201
Query: 408 LIPVSYTSFNSYFTKKK 458
L+ VSY + KKK
Sbjct: 202 LVVVSYAVDAQIWKKKK 218
>U58749-2|AAK18876.1| 355|Caenorhabditis elegans Hypothetical
protein B0496.5 protein.
Length = 355
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 405 LLIPVSYTSFNSYFTKKKVLYLSLCKASIGLITM--LYPLFIKF 530
++ PVSY F SYF K L++ L AS GL ++PL +F
Sbjct: 110 IIFPVSYGKFYSYFINWK-LFILLIFASTGLSVQGWVFPLDSRF 152
>AF016676-6|AAG24108.1| 354|Caenorhabditis elegans Seven tm
receptor protein 253 protein.
Length = 354
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 411 IPVSYTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIIC 575
IP + T S+F ++ + SI L +L PL F +T Y + + ++C
Sbjct: 275 IPATVTYITSFFNVSSEIFGEILDLSIALYPVLNPLPTIFIVTSYR-KAVIDLLC 328
>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
protein kinase protein.
Length = 1425
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Frame = +2
Query: 578 HISSQYFRSSSHASCTMVYGEEIENV--RKDCPDTTDAGH*GGKRKNSISI-----LTRR 736
H S +YF+++S + +Y + +V R + G N+I I +T
Sbjct: 249 HFSDRYFKNTSKHAKDFIYRLFVRDVDQRATVEECLQHPWIRGPEGNAIDIRKASCITIS 308
Query: 737 HPKERKTRDQWKTC 778
H + KTR +WK C
Sbjct: 309 HIQSFKTRQRWKRC 322
>AF125963-3|AAD14744.2| 356|Caenorhabditis elegans Serpentine
receptor, class h protein10 protein.
Length = 356
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/99 (22%), Positives = 43/99 (43%)
Frame = +3
Query: 312 IYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVLYLSLCKASI 491
++ + F++I V S L T G + L + ++ +S + + L C+ +
Sbjct: 208 LFNASVFVSIIVGSI--LCATMGSVSLLALREMVRECSSSLRTISMHRGFLISLFCQIGV 265
Query: 492 GLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGAL 608
+ + +PLF+ T + F G AI S+ GA+
Sbjct: 266 HGVMLGFPLFVYMTSIVFHFDGNDVGYVAIVLASLHGAM 304
>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
(death-associated protein)kinase homolog protein 1
protein.
Length = 1425
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Frame = +2
Query: 578 HISSQYFRSSSHASCTMVYGEEIENV--RKDCPDTTDAGH*GGKRKNSISI-----LTRR 736
H S +YF+++S + +Y + +V R + G N+I I +T
Sbjct: 249 HFSDRYFKNTSKHAKDFIYRLFVRDVDQRATVEECLQHPWIRGPEGNAIDIRKASCITIS 308
Query: 737 HPKERKTRDQWKTC 778
H + KTR +WK C
Sbjct: 309 HIQSFKTRQRWKRC 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,727,425
Number of Sequences: 27780
Number of extensions: 381937
Number of successful extensions: 990
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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