Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3f01
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.70 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   4.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.9  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   8.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = -1

Query: 401 NEIQKC*QRLYRVIPKMLEFNNKLFTKLVINSRYRQGAGLV 279
           +E+QK  Q +YR++ + +E  NKLF   ++   ++ G  +V
Sbjct: 610 HELQKLAQ-VYRILGETIETWNKLFGYQILLITFQSGLNVV 649


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 523 IASICSNEPNGWHFGINS 470
           + SIC +  +G H+G+ S
Sbjct: 85  LCSICGDRASGKHYGVYS 102


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 575 CVHQHSIVKFSWCCSYMNS 519
           C+ Q + + FS+C  Y NS
Sbjct: 261 CLIQFNTIVFSFCYCYYNS 279


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 550 SSAGVAAT*IASICSNEPNGWHFGIN 473
           +SAG+  T  +++     +GW FG N
Sbjct: 135 ASAGINKTFKSTLTGTPVDGWLFGDN 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,804
Number of Sequences: 336
Number of extensions: 4493
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)