Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3f01
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008861-1|AAH08861.1| 351|Homo sapiens ATPase, H+ transporting... 398 e-111
BC065207-1|AAH65207.1| 350|Homo sapiens ATPase, H+ transporting... 330 3e-90
AY079172-1|AAL87000.1| 350|Homo sapiens vacuolar H+ ATPase d2 s... 330 3e-90
AK096027-1|BAC04679.1| 350|Homo sapiens protein ( Homo sapiens ... 330 3e-90
X71490-1|CAA50591.1| 274|Homo sapiens vacuolar proton ATPase pr... 281 2e-75
BC020880-1|AAH20880.1| 293|Homo sapiens F-box protein 6 protein. 32 2.1
AL031731-6|CAI20214.1| 293|Homo sapiens F-box protein 6 protein. 32 2.1
AF233223-1|AAF67153.1| 293|Homo sapiens F-box protein FBG2 prot... 32 2.1
>BC008861-1|AAH08861.1| 351|Homo sapiens ATPase, H+ transporting,
lysosomal 38kDa, V0 subunit d1 protein.
Length = 351
Score = 398 bits (981), Expect = e-111
Identities = 181/224 (80%), Positives = 203/224 (90%)
Frame = +3
Query: 126 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 305
FN+D GYLEGL RG K G+L Q+DYLNLVQCETLEDLKLHLQ TDYG FLANE SPL+VS
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLTVS 68
Query: 306 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 485
IDD+L+EK+V+EF+H+RNH+ EPL++FLDFITYSYMIDN+ILLITGTLHQR I+EL+PK
Sbjct: 69 VIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPK 128
Query: 486 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 665
CHPLGSFEQMEA+++A TPAELYNA+LVDTPLA FF DCISEQDLDEMNIEIIRNTLYKA
Sbjct: 129 CHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKA 188
Query: 666 YLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGTEL 797
YLE+FY FC +GGTTAD MC IL FEADRRA IITINSFGTEL
Sbjct: 189 YLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGTEL 232
>BC065207-1|AAH65207.1| 350|Homo sapiens ATPase, H+ transporting,
lysosomal 38kDa, V0 subunit d2 protein.
Length = 350
Score = 330 bits (811), Expect = 3e-90
Identities = 146/224 (65%), Positives = 185/224 (82%)
Frame = +3
Query: 126 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 305
FN+D GYLEGL RG K +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN +PL+VS
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 306 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 485
ID ++R++L EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 486 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 665
CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+SE LDE+NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKS 188
Query: 666 YLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGTEL 797
YLEAFY FCK G TA+VMC IL FEADRRA IIT+NSFGTEL
Sbjct: 189 YLEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNSFGTEL 232
>AY079172-1|AAL87000.1| 350|Homo sapiens vacuolar H+ ATPase d2
subunit protein.
Length = 350
Score = 330 bits (811), Expect = 3e-90
Identities = 146/224 (65%), Positives = 185/224 (82%)
Frame = +3
Query: 126 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 305
FN+D GYLEGL RG K +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN +PL+VS
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 306 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 485
ID ++R++L EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 486 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 665
CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+SE LDE+NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKS 188
Query: 666 YLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGTEL 797
YLEAFY FCK G TA+VMC IL FEADRRA IIT+NSFGTEL
Sbjct: 189 YLEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNSFGTEL 232
>AK096027-1|BAC04679.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38708 fis, clone KIDNE2002872, moderately
similar to Mus musculus Ac39/physophilin mRNA. ).
Length = 350
Score = 330 bits (811), Expect = 3e-90
Identities = 146/224 (65%), Positives = 185/224 (82%)
Frame = +3
Query: 126 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 305
FN+D GYLEGL RG K +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN +PL+VS
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 306 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 485
ID ++R++L EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 486 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 665
CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+SE LDE+NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKS 188
Query: 666 YLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGTEL 797
YLEAFY FCK G TA+VMC IL FEADRRA IIT+NSFGTEL
Sbjct: 189 YLEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNSFGTEL 232
>X71490-1|CAA50591.1| 274|Homo sapiens vacuolar proton ATPase
protein.
Length = 274
Score = 281 bits (690), Expect = 2e-75
Identities = 127/155 (81%), Positives = 143/155 (92%)
Frame = +3
Query: 333 LVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQ 512
+V+EF+H+RNH+ EPL++FLDFITYSYMIDN+ILLITGTLHQR I+EL+PKCHPLGSFEQ
Sbjct: 1 MVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQ 60
Query: 513 MEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYDFC 692
MEA+++A TPAELYNA+LVDTPLA FF DCISEQDLDEMNIEIIRNTLYKAYLE+FY FC
Sbjct: 61 MEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFC 120
Query: 693 KQIGGTTADVMCEILAFEADRRAIIITINSFGTEL 797
+GGTTAD MC IL FEADRRA IITINSFGTEL
Sbjct: 121 TLLGGTTADAMCPILEFEADRRAFIITINSFGTEL 155
>BC020880-1|AAH20880.1| 293|Homo sapiens F-box protein 6 protein.
Length = 293
Score = 32.3 bits (70), Expect = 2.1
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 72 RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 251
+K F+ S ++ +K + + + GY E L F+ I+ + + C LK+ L
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
Query: 252 GTDYGTFLANEPSPLSV 302
DY + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205
>AL031731-6|CAI20214.1| 293|Homo sapiens F-box protein 6 protein.
Length = 293
Score = 32.3 bits (70), Expect = 2.1
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 72 RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 251
+K F+ S ++ +K + + + GY E L F+ I+ + + C LK+ L
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
Query: 252 GTDYGTFLANEPSPLSV 302
DY + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205
>AF233223-1|AAF67153.1| 293|Homo sapiens F-box protein FBG2
protein.
Length = 293
Score = 32.3 bits (70), Expect = 2.1
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 72 RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 251
+K F+ S ++ +K + + + GY E L F+ I+ + + C LK+ L
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
Query: 252 GTDYGTFLANEPSPLSV 302
DY + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,754,186
Number of Sequences: 237096
Number of extensions: 2516976
Number of successful extensions: 4823
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4823
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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