Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3e21
         (114 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   1.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   4.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   4.2  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    19   7.4  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    19   7.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    18   9.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    18   9.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    18   9.7  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 5/17 (29%), Positives = 13/17 (76%)
 Frame = -2

Query: 56  QGLSCHFKTNMRFYIHF 6
           QGL+ H+++  R ++++
Sbjct: 127 QGLTLHYRSKRRGFVYY 143


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 109 FLHGITTLFIDNNNKLADKGYLVILKQI 26
           FL  +  L     NK+ADK Y+   K I
Sbjct: 11  FLASLCLLVQAVPNKVADKTYVTRQKNI 38


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 109 FLHGITTLFIDNNNKLADKGYLVILKQI 26
           FL  +  L     NK+ADK Y+   K I
Sbjct: 11  FLASLCLLVQAVPNKVADKTYVTRQKNI 38


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 79  DNNNKLADKGYLVILKQI 26
           +NN K   K Y++ ++QI
Sbjct: 110 NNNYKKLYKNYIINIEQI 127


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 79  DNNNKLADKGYLVILKQI 26
           +NN K   K Y++ ++QI
Sbjct: 110 NNNYKKLYKNYIINIEQI 127


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/17 (29%), Positives = 11/17 (64%)
 Frame = -3

Query: 76  NNNKLADKGYLVILKQI 26
           N NK  +KG + ++ ++
Sbjct: 147 NTNKFLEKGPVALINEL 163


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +1

Query: 46   DNPCQLIYYCYQ 81
            DN C ++Y+  Q
Sbjct: 1524 DNGCPILYFTIQ 1535


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +1

Query: 46   DNPCQLIYYCYQ 81
            DN C ++Y+  Q
Sbjct: 1520 DNGCPILYFTIQ 1531


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,090
Number of Sequences: 438
Number of extensions: 272
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 18
effective length of database: 138,459
effective search space used:  2630721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)