Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3e19
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    24   0.95 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   8.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +2

Query: 263 DLISDLIKDASKTGNGLIDENDFMQWVTKI---QALQGLDVTTSGGDSEEEI 409
           +LIS  I D    GNG + E+ + Q    +    A+QG  +     D  ++I
Sbjct: 360 NLISPSINDDGTCGNGYVCEHRWRQIFNMVGFRNAVQGTGIENWWSDGNQQI 411


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -3

Query: 129 VKSMRSETPN*NMSFTNTCHYFYHLIFFIVISTRFAIFEV 10
           V ++ + TP     F +  H ++ + F++V S+    F++
Sbjct: 8   VGNVLAMTPTKEKRFPHRIHSYFMVAFYVVFSSVSTFFKI 47


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -3

Query: 129 VKSMRSETPN*NMSFTNTCHYFYHLIFFIVISTRFAIFEV 10
           V ++ + TP     F +  H ++ + F++V S+    F++
Sbjct: 8   VGNVLAMTPTKEKRFPHRIHSYFMVAFYVVFSSVSTFFKI 47


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 432 NAASRSLVISSSESPP 385
           N AS S +ISSS SPP
Sbjct: 173 NRASVSPLISSSSSPP 188


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 113 ERIDFTMNVKKDNDFYLRTAFGLLDRD 193
           ER DF +   +  D Y     GL+D D
Sbjct: 327 ERFDFIVTADQPQDVYWMHFRGLMDCD 353


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 263 DLISDLIKDASKTGNGLIDENDFMQ 337
           +LIS  I D    GNG + E+ + Q
Sbjct: 361 NLISPSINDDGTCGNGYVCEHRWRQ 385


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 215 LVSRDHRCPGPIVQTLYGDK 156
           +++ +   PGP +Q   GDK
Sbjct: 164 ILTANRMIPGPSIQVCEGDK 183


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 215 LVSRDHRCPGPIVQTLYGDK 156
           +++ +   PGP +Q   GDK
Sbjct: 164 ILTANRMIPGPSIQVCEGDK 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,641
Number of Sequences: 336
Number of extensions: 2983
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)