Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3e19
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 96 3e-21
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 70 3e-13
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 69 4e-13
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 52 5e-08
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 48 9e-07
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 41 2e-04
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 40 4e-04
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 37 0.002
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 31 0.11
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 31 0.11
SPAC25B8.09 |||trans-aconitate 3-methyltransferase |Schizosaccha... 29 0.77
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 27 3.1
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 26 4.1
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 26 4.1
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 26 4.1
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 26 4.1
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 26 5.5
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 25 7.2
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 25 7.2
SPBC56F2.11 |met6||homoserine O-acetyltransferase|Schizosaccharo... 25 9.5
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 96.3 bits (229), Expect = 3e-21
Identities = 55/158 (34%), Positives = 85/158 (53%)
Frame = +2
Query: 128 TMNVKKDNDFYLRTAFGLLDRDSDGHVTPAELQFMLRNLGIEVSDDLISDLIKDASKTGN 307
T N+ + R AF L DRD DG++T EL ++R+LG + + D+I + GN
Sbjct: 3 TRNLTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGN 62
Query: 308 GLIDENDFMQWVTKIQALQGLDVTTSGGDSEEEITRDLLAAFKVFDRDDNGYITRDELQA 487
G ID +F+ + + D+EEE+ AFKVFD+D NGYIT +EL
Sbjct: 63 GTIDFTEFLTMMAR---------KMKDTDNEEEVRE----AFKVFDKDGNGYITVEELTH 109
Query: 488 ALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKML 601
L +GE ++ ++ ++ D D DG I+YEEF +++
Sbjct: 110 VLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVI 147
Score = 53.2 bits (122), Expect = 3e-08
Identities = 22/67 (32%), Positives = 45/67 (67%)
Frame = +2
Query: 146 DNDFYLRTAFGLLDRDSDGHVTPAELQFMLRNLGIEVSDDLISDLIKDASKTGNGLIDEN 325
DN+ +R AF + D+D +G++T EL +L +LG +S + ++D+I++A G+G+I+
Sbjct: 82 DNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYE 141
Query: 326 DFMQWVT 346
+F + ++
Sbjct: 142 EFSRVIS 148
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 69.7 bits (163), Expect = 3e-13
Identities = 49/158 (31%), Positives = 87/158 (55%)
Frame = +2
Query: 131 MNVKKDNDFYLRTAFGLLDRDSDGHVTPAELQFMLRNLGIEVSDDLISDLIKDASKTGNG 310
M K+ ++ AF L D D DG + + + +LR+LGI V+D ++L K +++ G+
Sbjct: 1 MPASKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTD---AELAKLSNELGDA 57
Query: 311 LIDENDFMQWVTKIQALQGLDVTTSGGDSEEEITRDLLAAFKVFDRDDNGYITRDELQAA 490
IDE FM +V+ L T +SEEE + AF+VFD+D++GYI +
Sbjct: 58 -IDEKKFMSFVSN-----KLRET----ESEEEYIK----AFRVFDKDNSGYIETAKFADY 103
Query: 491 LEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKMLL 604
++ +GE ++D ++ ++ D + G DY +FV+ ++
Sbjct: 104 MKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQRIM 141
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 69.3 bits (162), Expect = 4e-13
Identities = 45/163 (27%), Positives = 81/163 (49%)
Frame = +2
Query: 116 RIDFTMNVKKDNDFYLRTAFGLLDRDSDGHVTPAELQFMLRNLGIEVSDDLISDLIKDAS 295
R++ T ++D + AF L D D D + EL+ +R LG + +++D
Sbjct: 28 RVEITEEQRQD----INEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFD 83
Query: 296 KTGNGLIDENDFMQWVTKIQALQGLDVTTSGGDSEEEITRDLLAAFKVFDRDDNGYITRD 475
KTG G + DF++ +T+ + D EEI R AF++FD D+ G I+
Sbjct: 84 KTGKGYLQMEDFVRVMTEKIVER---------DPLEEIKR----AFELFDDDETGKISLR 130
Query: 476 ELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKMLL 604
L+ + + E + D +L ++ D+D DG I+ +EF+ +++
Sbjct: 131 NLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAIMM 173
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 52.4 bits (120), Expect = 5e-08
Identities = 41/152 (26%), Positives = 74/152 (48%)
Frame = +2
Query: 149 NDFYLRTAFGLLDRDSDGHVTPAELQFMLRNLGIEVSDDLISDLIKDASKTGNGLIDEND 328
+D + AF L DR G + + +LR G + + + ++ + L E D
Sbjct: 4 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPT-------LAEITEIESTLPAEVD 56
Query: 329 FMQWVTKIQALQGLDVTTSGGDSEEEITRDLLAAFKVFDRDDNGYITRDELQAALEMIGE 508
Q++ + G D+ GD EE + F+VFD+D G I EL+ L +GE
Sbjct: 57 MEQFLQVLNRPNGFDMP---GDPEE-----FVKGFQVFDKDATGMIGVGELRYVLTSLGE 108
Query: 509 PVTDAQLNQVLALGDIDHDGRIDYEEFVKMLL 604
+++ +++++L G DG ++Y +FV+M+L
Sbjct: 109 KLSNEEMDELLK-GVPVKDGMVNYHDFVQMIL 139
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 48.4 bits (110), Expect = 9e-07
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Frame = +2
Query: 257 SDDLISDLIKDASKTGNGLIDENDFMQWVTKIQALQGLDVTTSGGDSEEEITRDLLAAFK 436
S+ L S L + G G +D +F + L V + G+ EE+ L AFK
Sbjct: 54 SNPLASRLFSVVDEDGGGDVDFQEF---------INSLSVFSVHGNKEEK----LKFAFK 100
Query: 437 VFDRDDNGYITRDELQAALE-MIGEPVTDAQLNQV----LALGDIDHDGRIDYEEF 589
++D D +GYI+ EL L+ M+G + + QL Q+ + D D DG+I +EEF
Sbjct: 101 IYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEF 156
Score = 31.9 bits (69), Expect = 0.083
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +2
Query: 371 DVTTSGGDSEEEITRDLLAAFKVFDRDDNGYITRDELQAALEMIGEPVTDAQLNQVLALG 550
D+ ++ S EEI R + F D + +G I R+E + + P+ +++ ++
Sbjct: 11 DLISNSSFSNEEIER-IRKRFIKIDANQSGSIDRNEFLSIPSVASNPLA----SRLFSVV 65
Query: 551 DIDHDGRIDYEEFVKML 601
D D G +D++EF+ L
Sbjct: 66 DEDGGGDVDFQEFINSL 82
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 431 FKVFDRDDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKML 601
F VFD D NGYI E AL + + +L L D+D++G I Y+E ++++
Sbjct: 69 FNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIV 125
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Frame = +2
Query: 395 SEEEITRDLLAAFKVFDRDDNGYITRDEL----QAALEMIG--------EPVTDAQLNQV 538
S E+ L+ AF+++D D+NG I+ DE+ A +M+G E + ++N++
Sbjct: 93 SRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKI 152
Query: 539 LALGDIDHDGRIDYEEF 589
+ D + DG++ EEF
Sbjct: 153 FNMMDKNKDGQLTLEEF 169
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 39.5 bits (88), Expect = 4e-04
Identities = 36/144 (25%), Positives = 63/144 (43%)
Frame = +2
Query: 161 LRTAFGLLDRDSDGHVTPAELQFMLRNLGIEVSDDLISDLIKDASKTGNGLIDENDFMQW 340
L+ AF LLD+D DG++ +++ ML +L + S+D I+ + + N +
Sbjct: 50 LKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESI----------NPPINL 99
Query: 341 VTKIQALQGLDVTTSGGDSEEEITRDLLAAFKVFDRDDNGYITRDELQAALEMIGEPVTD 520
+ A+ + S DLL AF FD +G I ++ AL +G+ +
Sbjct: 100 AAFLTAMGSMLCRISP-------RNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDP 152
Query: 521 AQLNQVLALGDIDHDGRIDYEEFV 592
++ +L G YE+FV
Sbjct: 153 QEVESILR--SYTSHGVFYYEKFV 174
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +2
Query: 404 EITRDLLAAFKVFDRDDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYE 583
E+ + AF +FD GYI ++L+ + +GE +T QL +L L +G++ E
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLAGT--NGKVSRE 66
Query: 584 EFVKM 598
EF ++
Sbjct: 67 EFAEL 71
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 31.5 bits (68), Expect = 0.11
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 452 DNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 589
+NGY++ + L ++ +L ++ L DID DG D++EF
Sbjct: 19 ENGYLSGSKAAGVLR--SSKLSSDKLEKIWDLADIDDDGMFDFDEF 62
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 410 TRDLLAAFKVFDRDDNGYITRDELQAALEMIGEPVTDAQLNQVLALGD 553
+ +L + D D GYI +DE A+E+I ++ L +LA D
Sbjct: 335 SEELARIWDTVDTQDRGYIDKDEFAVAMEIIKLRLSGKSLASILAYDD 382
>SPAC25B8.09 |||trans-aconitate 3-methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 251
Score = 28.7 bits (61), Expect = 0.77
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 333 MKSFSSIKPLPVLLASLMRSEMRSSLTSMPRLRN 232
M SFSSI LPV M +E+ + ++PR +N
Sbjct: 197 MNSFSSINRLPVEEKEKMHAELDEIIKTIPRAQN 230
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 330 KSFSSIKPLPVLLASLMRSEMRSSLTSMPRLRNMNCSSAGVT*PSLSR 187
+S SS+ P P M S M ++ SMP L N + ++ G T +SR
Sbjct: 346 QSKSSVFPQPASAMKPMASPMLPNVNSMPYLSNGDHNNNGNTSSPVSR 393
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 26.2 bits (55), Expect = 4.1
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3
Query: 330 KSFSSIKPLPVL--LASLMRSEMRSSLTSMPRLRNMNCSSAGVT*PSLSRSNSPN 172
++FSS PLP L LASL +E R S S+ ++ + S+ T PS SP+
Sbjct: 419 ENFSSW-PLPPLMDLASLSVAEPRDSQPSVSQVNDTFVKSSDSTFPSSQSMQSPS 472
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/75 (17%), Positives = 35/75 (46%)
Frame = +2
Query: 365 GLDVTTSGGDSEEEITRDLLAAFKVFDRDDNGYITRDELQAALEMIGEPVTDAQLNQVLA 544
GL++ G+ + + +L ++ +++ + + ++ +M+ + L +
Sbjct: 282 GLNLVCHQGEKMIDYSENL-NPWEKLEKEQSAQLDLGDVHRMCQMLHLNASMEFLEETFQ 340
Query: 545 LGDIDHDGRIDYEEF 589
D DH G++ +EEF
Sbjct: 341 KADADHSGKLSFEEF 355
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 40 NDKKY*VIKIVTCVSEGHILIWCFRTH 120
ND Y +V+C +G I+ W RTH
Sbjct: 238 NDSPY---NLVSCSRDGSIIFWDMRTH 261
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 251 EVSDDLISDLIKDASKTGNGLIDENDFMQ 337
E ++++S L+++ TGN L + DF Q
Sbjct: 402 ETLNNMVSALVEEQQSTGNELFRKGDFSQ 430
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 185 DRDSDGHVTPAELQFMLRNLGIEVSDDLISDLIKDASKTGNGLIDEN 325
+ D D V +++ +LG E+S D++ D + GN L+DE+
Sbjct: 919 EADDDEGVDDFAVEYGGPDLGGEISADVVDDFDEFEHFQGNYLLDED 965
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 25.4 bits (53), Expect = 7.2
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -3
Query: 315 IKPLPVLLASLMRSEMRSSLTSMPRLRNMNCSSAGVT*P-SLSRSNSP 175
++PLP+ L S+ E S S+PR SSA +T P S+++SN P
Sbjct: 719 LRPLPLELLSISYIEDSPSRGSLPR----RPSSALLTNPISITKSNPP 762
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 197 DGHVTPAE--LQFMLRNLGIEVSDDLISDLIKDASKTGN 307
DG V E L+ M + LG+E SDD DL K + + N
Sbjct: 545 DGRVGREEAWLKSMAQELGVESSDDEDPDLPKKSESSKN 583
>SPBC56F2.11 |met6||homoserine
O-acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 489
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 338 WVTKIQALQGLDVTTS-GGDSEEEITRDLLAAFKVFDRDDNGYITRDE 478
+++ + L D+T G DS +E+ +DL V + +G T DE
Sbjct: 363 YISITKKLDTHDITRGRGSDSPKEVMKDLSLPVLVLGIESDGLFTFDE 410
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,471,453
Number of Sequences: 5004
Number of extensions: 48908
Number of successful extensions: 189
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -