Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3e19
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    28   0.30 
AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    26   1.2  
DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.    25   2.8  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   4.8  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   8.4  

>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -3

Query: 384 LVVTSKPCKACIFVTH--CMKSFSSIKPLPVLLASLMRSEMRSSLTSMPRLRNMN 226
           +V+ +   +  ++ +H    + F SIKP P+L  S+ ++   SS T    +R  N
Sbjct: 266 IVICNLSVRKVLYQSHRKMCRQFGSIKPTPMLNRSMSQTPKSSSFTDSNIIRMFN 320


>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 179 LLDRDSDGHVTPAELQFMLRNLGIEVSDDLISDLIKD 289
           L D++ DG +  AEL   L  LG  + D  + +++KD
Sbjct: 93  LYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMKD 129


>DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 260 DDLISDLIKDASKTGNGLIDENDFMQWV 343
           +DL++D I +A K    +  +N F +WV
Sbjct: 105 EDLVTDDITNAIKCSKIIQQQNGFNEWV 132


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 7/38 (18%), Positives = 19/38 (50%)
 Frame = +2

Query: 335 QWVTKIQALQGLDVTTSGGDSEEEITRDLLAAFKVFDR 448
           +W+  +  +    +    G +E+ +  DLL ++ + +R
Sbjct: 18  KWIIVLMLIANSSILCMAGYNEKRLLHDLLDSYNILER 55


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +2

Query: 305  NGLIDENDFMQWVTKIQ--ALQGLDVTTSGGDSEEEITRDLLAAFK 436
            NG I +N+F  W +  +  A      T  GG ++ +  + ++  F+
Sbjct: 963  NGAIKQNEFPSWASNKEYLAYNSPSATFLGGLTQPKQAKSVIGLFR 1008


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,689
Number of Sequences: 2352
Number of extensions: 11890
Number of successful extensions: 70
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)