Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3e12
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17689-1|CAA76814.1|  111|Anopheles gambiae gSG2 protein protein.      25   3.0  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   3.0  
AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.     25   3.0  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    25   3.0  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    24   3.9  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    24   5.2  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   9.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.1  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.1  

>Y17689-1|CAA76814.1|  111|Anopheles gambiae gSG2 protein protein.
          Length = 111

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 577 VEGLGKSDSGSRDDRGTNNYGLDDFG 500
           + G G+S + S +  GT+  GL DFG
Sbjct: 35  INGTGQSFNFSGESNGTSIPGLPDFG 60


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 481 APQPCPPRSRQARNCWYPYHPGSRCHSSRDPQ 576
           A  P PP  ++   C    H  S C S+ D Q
Sbjct: 497 AAPPTPPERQRCFRCLEMGHIASNCRSTADRQ 528


>AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.
          Length = 114

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 577 VEGLGKSDSGSRDDRGTNNYGLDDFG 500
           + G G+S + S +  GT+  GL DFG
Sbjct: 35  INGTGQSFNFSGESNGTSIPGLPDFG 60


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 502 RSRQARNCWYPYHPGSRCHSSRDPQLSQLTDILA 603
           +++  RNC  P H G  C  +R  + + +  + A
Sbjct: 25  QAQTCRNCAAPVHHGLNCVQNRQNRFANVVQVKA 58


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 245 EQVRRRWARRCQQEQVQQR 189
           +Q R+RW ++ Q++Q QQR
Sbjct: 188 DQQRQRWRQQQQKQQRQQR 206


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/36 (22%), Positives = 18/36 (50%)
 Frame = +2

Query: 245 LVDTYEPISVGPAIVEGAPVTVTGADGTPLVQIIIN 352
           +++ +  +      +EG  +TV   DG P+  + +N
Sbjct: 390 MINAFASVCPAQVTIEGHALTVIATDGEPVHPVQVN 425


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 398 DIAEEPLPEVVILPTPVFPEI 460
           D+ E P     I+P P FP+I
Sbjct: 546 DMKEAPTTNPRIVPIPTFPQI 566


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 646 DHHFCIFIYNYTVLLQ 599
           D HF +F   YT LLQ
Sbjct: 357 DRHFLLFCMVYTTLLQ 372


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 35/156 (22%), Positives = 55/156 (35%), Gaps = 7/156 (4%)
 Frame = -1

Query: 565  GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGE-------NNNFGQRLF 407
            G   S  R ++     G D   E+  GE  G R    +    G+       +    Q+  
Sbjct: 950  GGGGSRKRKEKARRGSGGDSDSEEEEGE--GSRKRKKKGASGGQKKRQKAMDEGLSQKQK 1007

Query: 406  GNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGD 227
            G +L+   +S     T   D D D    I++GD   G      + R   +  ++  SDG 
Sbjct: 1008 GRILSKATVS-----TSESDSD-DSRLKIASGDESGGESGAPATKRKRRIASDEEDSDGS 1061

Query: 226  GLVGVNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRS 119
                 ++SRS             +R G    + SRS
Sbjct: 1062 QRRSRSRSRSGSGSRSRSRSGSGSRAGSRAGSGSRS 1097


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,329
Number of Sequences: 2352
Number of extensions: 12913
Number of successful extensions: 47
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)