Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3e10
         (128 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   1.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    19   4.6  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    19   6.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   6.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   6.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    18   8.1  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 6   CDSNATIHVVSIKCLKFGDF 65
           CDSN   H+ +I   K GD+
Sbjct: 420 CDSNPCKHLDAICQDKLGDY 439


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 79  FLGLPKSPNFRHLIE 35
           F+GL    N RHL E
Sbjct: 60  FVGLQADGNVRHLDE 74


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 42  KCLKFGDFGK 71
           KC K GDF +
Sbjct: 126 KCYKCGDFSR 135


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 18   ATIHVVSIKCLKFG 59
            A +H     CLK+G
Sbjct: 992  ALLHPQEFNCLKYG 1005


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 18   ATIHVVSIKCLKFG 59
            A +H     CLK+G
Sbjct: 992  ALLHPQEFNCLKYG 1005


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -3

Query: 117 PF*IFIINVTAKFF*VCQNHQILDT*SRQRESSRCCHR 4
           PF   + N +  +  V QNH+   T  +  E   C  R
Sbjct: 134 PFTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKR 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,753
Number of Sequences: 336
Number of extensions: 363
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 23
effective length of database: 114,857
effective search space used:  2182283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)