Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3e10
         (128 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   3.1  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    19   4.1  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    19   7.2  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              18   9.6  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    18   9.6  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 6   CDSNATIHVVSIKCL 50
           CD N  ++ V I CL
Sbjct: 582 CDPNLAVYGVWINCL 596


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 33  VSIKCLKFGDFGKPKKIW 86
           +S + LK   +GKP  IW
Sbjct: 79  LSPEVLKKEPYGKPVDIW 96


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding
          protein ASP4 protein.
          Length = 136

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +1

Query: 73 LKKFGCY 93
          +KKFGC+
Sbjct: 49 MKKFGCF 55


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 33  VSIKCLKFGDFGK 71
           V  KC+K GD  +
Sbjct: 133 VECKCIKCGDISQ 145


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 33  VSIKCLKFGDFGK 71
           V  KC+K GD  +
Sbjct: 133 VECKCIKCGDISQ 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,629
Number of Sequences: 438
Number of extensions: 502
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 23
effective length of database: 136,269
effective search space used:  2589111
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)