Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3e09
         (549 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071104-1|AAL48726.1|  102|Drosophila melanogaster RE16337p pro...   113   1e-25
AE014298-2369|AAF48593.1|  102|Drosophila melanogaster CG9921-PA...   113   1e-25
AE014298-1474|AAF46609.1|  624|Drosophila melanogaster CG15295-P...    31   1.4  

>AY071104-1|AAL48726.1|  102|Drosophila melanogaster RE16337p
           protein.
          Length = 102

 Score =  113 bits (272), Expect = 1e-25
 Identities = 52/96 (54%), Positives = 68/96 (70%)
 Frame = +1

Query: 127 TKKMSTEPEPTDLHWVQLRKEMGASHHVETTREKFHRKFTENPFVPLGCLATAGALSMGL 306
           + K+       +L W+QLR+++G    VETT+EK  RK  ENP VPLGCLAT  AL+ GL
Sbjct: 2   SNKIEVSLPEEELDWIQLRQDLGPVAEVETTKEKLQRKIKENPLVPLGCLATTAALTAGL 61

Query: 307 WSFRTGKTRLSQQMMRVRILAQGLTIAALVIGVVIT 414
           ++FRTG  ++SQ MMR RI AQG T+ ALV+GVV+T
Sbjct: 62  YNFRTGNRKMSQLMMRSRIAAQGFTVMALVVGVVMT 97


>AE014298-2369|AAF48593.1|  102|Drosophila melanogaster CG9921-PA
           protein.
          Length = 102

 Score =  113 bits (272), Expect = 1e-25
 Identities = 52/96 (54%), Positives = 68/96 (70%)
 Frame = +1

Query: 127 TKKMSTEPEPTDLHWVQLRKEMGASHHVETTREKFHRKFTENPFVPLGCLATAGALSMGL 306
           + K+       +L W+QLR+++G    VETT+EK  RK  ENP VPLGCLAT  AL+ GL
Sbjct: 2   SNKIEVSLPEEELDWIQLRQDLGPVAEVETTKEKLQRKIKENPLVPLGCLATTAALTAGL 61

Query: 307 WSFRTGKTRLSQQMMRVRILAQGLTIAALVIGVVIT 414
           ++FRTG  ++SQ MMR RI AQG T+ ALV+GVV+T
Sbjct: 62  YNFRTGNRKMSQLMMRSRIAAQGFTVMALVVGVVMT 97


>AE014298-1474|AAF46609.1|  624|Drosophila melanogaster CG15295-PA
           protein.
          Length = 624

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 125 KRRKCQLNQNQRIYIGCNCARKWEHLTM*KRQEKNFIE 238
           +R+    N ++ IYIG   A KWEH+   + Q KN +E
Sbjct: 570 RRKYRHQNYSKNIYIGTKNAEKWEHMRT-RLQFKNDVE 606


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,810,457
Number of Sequences: 53049
Number of extensions: 409900
Number of successful extensions: 802
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)