Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3e05
(743 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY515705-1|AAR99655.1| 509|Homo sapiens bestrophin 2 protein. 132 2e-30
AF440756-1|AAM76995.1| 509|Homo sapiens vitelliform macular dys... 132 2e-30
BC101823-1|AAI01824.1| 473|Homo sapiens bestrophin 4 protein. 129 1e-29
AY515707-1|AAR99657.1| 473|Homo sapiens bestrophin 4 protein. 129 1e-29
AL592166-10|CAI13005.1| 473|Homo sapiens vitelliform macular dy... 129 1e-29
AF440757-1|AAM76996.1| 473|Homo sapiens vitelliform macular dys... 129 1e-29
AY515706-1|AAR99656.1| 668|Homo sapiens bestrophin 3 protein. 125 1e-28
AK096459-1|BAC04797.1| 668|Homo sapiens protein ( Homo sapiens ... 125 1e-28
AF440758-1|AAM76997.1| 398|Homo sapiens vitelliform macular dys... 125 1e-28
AY515704-1|AAR99654.1| 585|Homo sapiens bestrophin 1 protein. 124 3e-28
AF073501-1|AAC33766.1| 585|Homo sapiens vitelliform macular dys... 124 3e-28
AF073500-1|AAC64926.1| 585|Homo sapiens vitelliform macular dys... 124 3e-28
AF057170-1|AAC64344.1| 435|Homo sapiens bestrophin protein. 124 3e-28
AF057169-1|AAC64343.1| 585|Homo sapiens bestrophin protein. 124 3e-28
AK000139-1|BAA90970.1| 466|Homo sapiens protein ( Homo sapiens ... 110 4e-24
BC041664-1|AAH41664.1| 604|Homo sapiens BEST1 protein protein. 103 9e-22
BC015220-1|AAH15220.1| 498|Homo sapiens BEST1 protein protein. 103 9e-22
AB209451-1|BAD92688.1| 376|Homo sapiens bestrophin variant prot... 83 1e-15
BC006440-1|AAH06440.1| 72|Homo sapiens BEST3 protein protein. 42 0.002
BC017418-1|AAH17418.1| 249|Homo sapiens Unknown (protein for IM... 33 1.1
BC011842-1|AAH11842.1| 203|Homo sapiens hypothetical protein FL... 33 1.1
BC005204-1|AAH05204.1| 240|Homo sapiens Unknown (protein for IM... 33 1.1
AK002046-1|BAA92053.1| 203|Homo sapiens protein ( Homo sapiens ... 33 1.1
>AY515705-1|AAR99655.1| 509|Homo sapiens bestrophin 2 protein.
Length = 509
Score = 132 bits (318), Expect = 2e-30
Identities = 64/145 (44%), Positives = 86/145 (59%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTVTYT VA R FG F ++L WRGSI E K
Sbjct: 1 MTVTYTARVANAR-FGGFSQLLLLWRGSIYKLLWRELLCFLGFYMALSAAYRFVLTEGQK 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
R FE +V YC + ++IP+SFVLGFYVT+V+NRWW+QY +P PD++ V+ T+HG+D+
Sbjct: 60 RYFEKLVIYCDQYASLIPVSFVLGFYVTLVVNRWWSQYLCMPLPDALMCVVAGTVHGRDD 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
RGRL RRT++RY L ++L +S
Sbjct: 120 RGRLYRRTLMRYAGLSAVLILRSVS 144
>AF440756-1|AAM76995.1| 509|Homo sapiens vitelliform macular
dystrophy 2-like protein 1 protein.
Length = 509
Score = 132 bits (318), Expect = 2e-30
Identities = 64/145 (44%), Positives = 86/145 (59%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTVTYT VA R FG F ++L WRGSI E K
Sbjct: 1 MTVTYTARVANAR-FGGFSQLLLLWRGSIYKLLWRELLCFLGFYMALSAAYRFVLTEGQK 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
R FE +V YC + ++IP+SFVLGFYVT+V+NRWW+QY +P PD++ V+ T+HG+D+
Sbjct: 60 RYFEKLVIYCDQYASLIPVSFVLGFYVTLVVNRWWSQYLCMPLPDALMCVVAGTVHGRDD 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
RGRL RRT++RY L ++L +S
Sbjct: 120 RGRLYRRTLMRYAGLSAVLILRSVS 144
>BC101823-1|AAI01824.1| 473|Homo sapiens bestrophin 4 protein.
Length = 473
Score = 129 bits (311), Expect = 1e-29
Identities = 62/145 (42%), Positives = 86/145 (59%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTV+YT +VA R FG F +L RWRGSI + +
Sbjct: 1 MTVSYTLKVAEAR-FGGFSGLLLRWRGSIYKLLYKEFLLFGALYAVLSITYRLLLTQEQR 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
+ + YC+ ++IPLSFVLGFYVT+V+NRWW+QYT+IP PD + +SA++HG D+
Sbjct: 60 YVYAQVARYCNRSADLIPLSFVLGFYVTLVVNRWWSQYTSIPLPDQLMCVISASVHGVDQ 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
RGRL+RRT++RY L +VL +S
Sbjct: 120 RGRLLRRTLIRYANLASVLVLRSVS 144
>AY515707-1|AAR99657.1| 473|Homo sapiens bestrophin 4 protein.
Length = 473
Score = 129 bits (311), Expect = 1e-29
Identities = 62/145 (42%), Positives = 86/145 (59%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTV+YT +VA R FG F +L RWRGSI + +
Sbjct: 1 MTVSYTLKVAEAR-FGGFSGLLLRWRGSIYKLLYKEFLLFGALYAVLSITYRLLLTQEQR 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
+ + YC+ ++IPLSFVLGFYVT+V+NRWW+QYT+IP PD + +SA++HG D+
Sbjct: 60 YVYAQVARYCNRSADLIPLSFVLGFYVTLVVNRWWSQYTSIPLPDQLMCVISASVHGVDQ 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
RGRL+RRT++RY L +VL +S
Sbjct: 120 RGRLLRRTLIRYANLASVLVLRSVS 144
>AL592166-10|CAI13005.1| 473|Homo sapiens vitelliform macular
dystrophy 2-like 2 protein.
Length = 473
Score = 129 bits (311), Expect = 1e-29
Identities = 62/145 (42%), Positives = 86/145 (59%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTV+YT +VA R FG F +L RWRGSI + +
Sbjct: 1 MTVSYTLKVAEAR-FGGFSGLLLRWRGSIYKLLYKEFLLFGALYAVLSITYRLLLTQEQR 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
+ + YC+ ++IPLSFVLGFYVT+V+NRWW+QYT+IP PD + +SA++HG D+
Sbjct: 60 YVYAQVARYCNRSADLIPLSFVLGFYVTLVVNRWWSQYTSIPLPDQLMCVISASVHGVDQ 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
RGRL+RRT++RY L +VL +S
Sbjct: 120 RGRLLRRTLIRYANLASVLVLRSVS 144
>AF440757-1|AAM76996.1| 473|Homo sapiens vitelliform macular
dystrophy 2-like protein 2 protein.
Length = 473
Score = 129 bits (311), Expect = 1e-29
Identities = 62/145 (42%), Positives = 86/145 (59%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTV+YT +VA R FG F +L RWRGSI + +
Sbjct: 1 MTVSYTLKVAEAR-FGGFSGLLLRWRGSIYKLLYKEFLLFGALYAVLSITYRLLLTQEQR 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
+ + YC+ ++IPLSFVLGFYVT+V+NRWW+QYT+IP PD + +SA++HG D+
Sbjct: 60 YVYAQVARYCNRSADLIPLSFVLGFYVTLVVNRWWSQYTSIPLPDQLMCVISASVHGVDQ 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
RGRL+RRT++RY L +VL +S
Sbjct: 120 RGRLLRRTLIRYANLASVLVLRSVS 144
>AY515706-1|AAR99656.1| 668|Homo sapiens bestrophin 3 protein.
Length = 668
Score = 125 bits (302), Expect = 1e-28
Identities = 59/145 (40%), Positives = 83/145 (57%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTVTY+ +VA FG F ++L +WRGSI K
Sbjct: 1 MTVTYSSKVANATFFG-FHRLLLKWRGSIYKLLYREFIVFAVLYTAISLVYRLLLTGVQK 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
R FE + YC + IP++FVLGFYVT+V+NRWWNQ+ +PWPD + +S+++HG DE
Sbjct: 60 RYFEKLSIYCDRYAEQIPVTFVLGFYVTLVVNRWWNQFVNLPWPDRLMFLISSSVHGSDE 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
GRL+RRT++RYV L ++ +S
Sbjct: 120 HGRLLRRTLMRYVNLTSLLIFRSVS 144
>AK096459-1|BAC04797.1| 668|Homo sapiens protein ( Homo sapiens
cDNA FLJ39140 fis, clone NTONG2009233, moderately
similar to BESTROPHIN. ).
Length = 668
Score = 125 bits (302), Expect = 1e-28
Identities = 59/145 (40%), Positives = 83/145 (57%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTVTY+ +VA FG F ++L +WRGSI K
Sbjct: 1 MTVTYSSKVANATFFG-FHRLLLKWRGSIYKLLYREFIVFAVLYTAISLVYRLLLTGVQK 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
R FE + YC + IP++FVLGFYVT+V+NRWWNQ+ +PWPD + +S+++HG DE
Sbjct: 60 RYFEKLSIYCDRYAEQIPVTFVLGFYVTLVVNRWWNQFVNLPWPDRLMFLISSSVHGSDE 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
GRL+RRT++RYV L ++ +S
Sbjct: 120 HGRLLRRTLMRYVNLTSLLIFRSVS 144
>AF440758-1|AAM76997.1| 398|Homo sapiens vitelliform macular
dystrophy 2-like protein 3 protein.
Length = 398
Score = 125 bits (302), Expect = 1e-28
Identities = 59/145 (40%), Positives = 83/145 (57%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTVTY+ +VA FG F ++L +WRGSI K
Sbjct: 1 MTVTYSSKVANATFFG-FHRLLLKWRGSIYKLLYREFIVFAVLYTAISLVYRLLLTGVQK 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
R FE + YC + IP++FVLGFYVT+V+NRWWNQ+ +PWPD + +S+++HG DE
Sbjct: 60 RYFEKLSIYCDRYAEQIPVTFVLGFYVTLVVNRWWNQFVNLPWPDRLMFLISSSVHGSDE 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
GRL+RRT++RYV L ++ +S
Sbjct: 120 HGRLLRRTLMRYVNLTSLLIFRSVS 144
>AY515704-1|AAR99654.1| 585|Homo sapiens bestrophin 1 protein.
Length = 585
Score = 124 bits (299), Expect = 3e-28
Identities = 59/145 (40%), Positives = 82/145 (56%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MT+TYT +VA R G+F ++L WRGSI E +
Sbjct: 1 MTITYTSQVANAR-LGSFSRLLLCWRGSIYKLLYGEFLIFLLCYYIIRFIYRLALTEEQQ 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE
Sbjct: 60 LMFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDE 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
+GRL+RRT++RY L ++L +S
Sbjct: 120 QGRLLRRTLIRYANLGNVLILRSVS 144
>AF073501-1|AAC33766.1| 585|Homo sapiens vitelliform macular
dystrophy protein protein.
Length = 585
Score = 124 bits (299), Expect = 3e-28
Identities = 59/145 (40%), Positives = 82/145 (56%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MT+TYT +VA R G+F ++L WRGSI E +
Sbjct: 1 MTITYTSQVANAR-LGSFSRLLLCWRGSIYKLLYGEFLIFLLCYYIIRFIYRLALTEEQQ 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE
Sbjct: 60 LMFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDE 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
+GRL+RRT++RY L ++L +S
Sbjct: 120 QGRLLRRTLIRYANLGNVLILRSVS 144
>AF073500-1|AAC64926.1| 585|Homo sapiens vitelliform macular
dystrophy protein protein.
Length = 585
Score = 124 bits (299), Expect = 3e-28
Identities = 59/145 (40%), Positives = 82/145 (56%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MT+TYT +VA R G+F ++L WRGSI E +
Sbjct: 1 MTITYTSQVANAR-LGSFSRLLLCWRGSIYKLLYGEFLIFLLCYYIIRFIYRLALTEEQQ 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE
Sbjct: 60 LMFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDE 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
+GRL+RRT++RY L ++L +S
Sbjct: 120 QGRLLRRTLIRYANLGNVLILRSVS 144
>AF057170-1|AAC64344.1| 435|Homo sapiens bestrophin protein.
Length = 435
Score = 124 bits (299), Expect = 3e-28
Identities = 59/145 (40%), Positives = 82/145 (56%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MT+TYT +VA R G+F ++L WRGSI E +
Sbjct: 1 MTITYTSQVANAR-LGSFSRLLLCWRGSIYKLLYGEFLIFLLCYYIIRFIYRLALTEEQQ 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE
Sbjct: 60 LMFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDE 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
+GRL+RRT++RY L ++L +S
Sbjct: 120 QGRLLRRTLIRYANLGNVLILRSVS 144
>AF057169-1|AAC64343.1| 585|Homo sapiens bestrophin protein.
Length = 585
Score = 124 bits (299), Expect = 3e-28
Identities = 59/145 (40%), Positives = 82/145 (56%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MT+TYT +VA R G+F ++L WRGSI E +
Sbjct: 1 MTITYTSQVANAR-LGSFSRLLLCWRGSIYKLLYGEFLIFLLCYYIIRFIYRLALTEEQQ 59
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE
Sbjct: 60 LMFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDE 119
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
+GRL+RRT++RY L ++L +S
Sbjct: 120 QGRLLRRTLIRYANLGNVLILRSVS 144
>AK000139-1|BAA90970.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ20132 fis, clone COL06441. ).
Length = 466
Score = 110 bits (265), Expect = 4e-24
Identities = 46/89 (51%), Positives = 66/89 (74%)
Frame = +1
Query: 475 ENAKRTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIH 654
E KR FE +V YC + ++IP+SFVLGFYVT+V+NRWW+QY +P PD++ V+ T+H
Sbjct: 13 EGQKRYFEKLVIYCDQYASLIPVSFVLGFYVTLVVNRWWSQYLCMPLPDALMCVVAGTVH 72
Query: 655 GQDERGRLMRRTIVRYVCLCLTMVLTMIS 741
G+D+RGRL RRT++RY L ++L +S
Sbjct: 73 GRDDRGRLYRRTLMRYAGLSAVLILRSVS 101
>BC041664-1|AAH41664.1| 604|Homo sapiens BEST1 protein protein.
Length = 604
Score = 103 bits (246), Expect = 9e-22
Identities = 42/83 (50%), Positives = 59/83 (71%)
Frame = +1
Query: 493 FEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDERG 672
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE+G
Sbjct: 2 FEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDEQG 61
Query: 673 RLMRRTIVRYVCLCLTMVLTMIS 741
RL+RRT++RY L ++L +S
Sbjct: 62 RLLRRTLIRYANLGNVLILRSVS 84
>BC015220-1|AAH15220.1| 498|Homo sapiens BEST1 protein protein.
Length = 498
Score = 103 bits (246), Expect = 9e-22
Identities = 42/83 (50%), Positives = 59/83 (71%)
Frame = +1
Query: 493 FEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDERG 672
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE+G
Sbjct: 2 FEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDEQG 61
Query: 673 RLMRRTIVRYVCLCLTMVLTMIS 741
RL+RRT++RY L ++L +S
Sbjct: 62 RLLRRTLIRYANLGNVLILRSVS 84
>AB209451-1|BAD92688.1| 376|Homo sapiens bestrophin variant
protein.
Length = 376
Score = 82.6 bits (195), Expect = 1e-15
Identities = 32/62 (51%), Positives = 45/62 (72%)
Frame = +1
Query: 556 GFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDERGRLMRRTIVRYVCLCLTMVLTM 735
GFYVT+V+ RWWNQY +PWPD + VS + G+DE+GRL+RRT++RY L ++L
Sbjct: 102 GFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLILRS 161
Query: 736 IS 741
+S
Sbjct: 162 VS 163
>BC006440-1|AAH06440.1| 72|Homo sapiens BEST3 protein protein.
Length = 72
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +1
Query: 637 VSATIHGQDERGRLMRRTIVRYVCLCLTMVLTMIS 741
+S+++HG DE GRL+RRT++RYV L ++ +S
Sbjct: 4 ISSSVHGSDEHGRLLRRTLMRYVNLTSLLIFRSVS 38
>BC017418-1|AAH17418.1| 249|Homo sapiens Unknown (protein for
IMAGE:4672457) protein.
Length = 249
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 266 VISETLHFPRIQFNNYNVEHVTVVSIT-LYSLNKYTFQLKSFPNLNV*HNINTDQFPKVY 90
VI +T+ R QF Y +E +++ + L + ++ F LK PN+ + D PK
Sbjct: 158 VIKQTMERERQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTC 217
Query: 89 K 87
K
Sbjct: 218 K 218
>BC011842-1|AAH11842.1| 203|Homo sapiens hypothetical protein
FLJ11184 protein.
Length = 203
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 266 VISETLHFPRIQFNNYNVEHVTVVSIT-LYSLNKYTFQLKSFPNLNV*HNINTDQFPKVY 90
VI +T+ R QF Y +E +++ + L + ++ F LK PN+ + D PK
Sbjct: 112 VIKQTMERERQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTC 171
Query: 89 K 87
K
Sbjct: 172 K 172
>BC005204-1|AAH05204.1| 240|Homo sapiens Unknown (protein for
IMAGE:3829877) protein.
Length = 240
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 266 VISETLHFPRIQFNNYNVEHVTVVSIT-LYSLNKYTFQLKSFPNLNV*HNINTDQFPKVY 90
VI +T+ R QF Y +E +++ + L + ++ F LK PN+ + D PK
Sbjct: 149 VIKQTMERERQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTC 208
Query: 89 K 87
K
Sbjct: 209 K 209
>AK002046-1|BAA92053.1| 203|Homo sapiens protein ( Homo sapiens
cDNA FLJ11184 fis, clone PLACE1007507. ).
Length = 203
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 266 VISETLHFPRIQFNNYNVEHVTVVSIT-LYSLNKYTFQLKSFPNLNV*HNINTDQFPKVY 90
VI +T+ R QF Y +E +++ + L + ++ F LK PN+ + D PK
Sbjct: 112 VIKQTMERERQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTC 171
Query: 89 K 87
K
Sbjct: 172 K 172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,297,647
Number of Sequences: 237096
Number of extensions: 1937598
Number of successful extensions: 2897
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2873
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -