Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3e05
(743 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY515709-1|AAR99659.1| 721|Drosophila melanogaster bestrophin 1... 195 6e-50
AY061546-1|AAL29094.1| 721|Drosophila melanogaster LP05915p pro... 195 6e-50
AF218817-1|AAF32327.1| 721|Drosophila melanogaster Dbest protein. 195 6e-50
AE014297-1109|AAF54503.1| 721|Drosophila melanogaster CG6264-PA... 195 6e-50
BT023181-1|AAY55597.1| 535|Drosophila melanogaster IP03329p pro... 173 3e-43
BT023144-1|AAY55560.1| 535|Drosophila melanogaster IP03529p pro... 173 3e-43
AE014296-2496|AAF49648.1| 535|Drosophila melanogaster CG12327-P... 173 3e-43
AE014296-2495|AAF49649.2| 460|Drosophila melanogaster CG7259-PA... 132 6e-31
BT010012-1|AAQ22481.1| 809|Drosophila melanogaster RE18408p pro... 114 1e-25
AE014296-1106|AAF50668.2| 809|Drosophila melanogaster CG10173-P... 114 1e-25
BT025894-1|ABG02138.1| 113|Drosophila melanogaster IP02836p pro... 71 2e-12
>AY515709-1|AAR99659.1| 721|Drosophila melanogaster bestrophin 1
protein.
Length = 721
Score = 195 bits (475), Expect = 6e-50
Identities = 89/145 (61%), Positives = 102/145 (70%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MT+TYTGEVATCRGFG FLK+L RWRGSI + K
Sbjct: 1 MTITYTGEVATCRGFGCFLKLLLRWRGSIYKLVWLDLLAFLTIYYAINMVYRFGLNPAQK 60
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
TFE IV YC + +IPLSFVLGFYV++VM RWWNQYT+IPWPD IAVFVS+ +HGQDE
Sbjct: 61 ETFEAIVQYCDSYRELIPLSFVLGFYVSIVMTRWWNQYTSIPWPDPIAVFVSSNVHGQDE 120
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
RGR+MRRTI+RYVCLCLTMVL +S
Sbjct: 121 RGRMMRRTIMRYVCLCLTMVLANVS 145
>AY061546-1|AAL29094.1| 721|Drosophila melanogaster LP05915p
protein.
Length = 721
Score = 195 bits (475), Expect = 6e-50
Identities = 89/145 (61%), Positives = 102/145 (70%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MT+TYTGEVATCRGFG FLK+L RWRGSI + K
Sbjct: 1 MTITYTGEVATCRGFGCFLKLLLRWRGSIYKLVWLDLLAFLTIYYAINMVYRFGLNPAQK 60
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
TFE IV YC + +IPLSFVLGFYV++VM RWWNQYT+IPWPD IAVFVS+ +HGQDE
Sbjct: 61 ETFEAIVQYCDSYRELIPLSFVLGFYVSIVMTRWWNQYTSIPWPDPIAVFVSSNVHGQDE 120
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
RGR+MRRTI+RYVCLCLTMVL +S
Sbjct: 121 RGRMMRRTIMRYVCLCLTMVLANVS 145
>AF218817-1|AAF32327.1| 721|Drosophila melanogaster Dbest protein.
Length = 721
Score = 195 bits (475), Expect = 6e-50
Identities = 89/145 (61%), Positives = 102/145 (70%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MT+TYTGEVATCRGFG FLK+L RWRGSI + K
Sbjct: 1 MTITYTGEVATCRGFGCFLKLLLRWRGSIYKLVWLDLLAFLTIYYAINMVYRFGLNPAQK 60
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
TFE IV YC + +IPLSFVLGFYV++VM RWWNQYT+IPWPD IAVFVS+ +HGQDE
Sbjct: 61 ETFEAIVQYCDSYRELIPLSFVLGFYVSIVMTRWWNQYTSIPWPDPIAVFVSSNVHGQDE 120
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
RGR+MRRTI+RYVCLCLTMVL +S
Sbjct: 121 RGRMMRRTIMRYVCLCLTMVLANVS 145
>AE014297-1109|AAF54503.1| 721|Drosophila melanogaster CG6264-PA
protein.
Length = 721
Score = 195 bits (475), Expect = 6e-50
Identities = 89/145 (61%), Positives = 102/145 (70%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MT+TYTGEVATCRGFG FLK+L RWRGSI + K
Sbjct: 1 MTITYTGEVATCRGFGCFLKLLLRWRGSIYKLVWLDLLAFLTIYYAINMVYRFGLNPAQK 60
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
TFE IV YC + +IPLSFVLGFYV++VM RWWNQYT+IPWPD IAVFVS+ +HGQDE
Sbjct: 61 ETFEAIVQYCDSYRELIPLSFVLGFYVSIVMTRWWNQYTSIPWPDPIAVFVSSNVHGQDE 120
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
RGR+MRRTI+RYVCLCLTMVL +S
Sbjct: 121 RGRMMRRTIMRYVCLCLTMVLANVS 145
>BT023181-1|AAY55597.1| 535|Drosophila melanogaster IP03329p
protein.
Length = 535
Score = 173 bits (420), Expect = 3e-43
Identities = 81/145 (55%), Positives = 95/145 (65%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTV+YT EVATC FG F K+L RWR SI + K
Sbjct: 1 MTVSYTAEVATCSHFGCFWKLLMRWRASIYKIIWVDLLAFLSCFYFMAVIYRYALRDVDK 60
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
FE IV YCH + N+IPLSFVLGFYV +++ RWWNQY T+PWPD +AV+VSA + GQDE
Sbjct: 61 PVFEDIVMYCHSYSNLIPLSFVLGFYVGIIIERWWNQYITVPWPDPLAVYVSALVRGQDE 120
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
GRLMRRTI+RYVCL LTMVL+MIS
Sbjct: 121 HGRLMRRTIMRYVCLALTMVLSMIS 145
>BT023144-1|AAY55560.1| 535|Drosophila melanogaster IP03529p
protein.
Length = 535
Score = 173 bits (420), Expect = 3e-43
Identities = 81/145 (55%), Positives = 95/145 (65%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTV+YT EVATC FG F K+L RWR SI + K
Sbjct: 1 MTVSYTAEVATCSHFGCFWKLLMRWRASIYKIIWVDLLAFLSCFYFMAVIYRYALRDVDK 60
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
FE IV YCH + N+IPLSFVLGFYV +++ RWWNQY T+PWPD +AV+VSA + GQDE
Sbjct: 61 PVFEDIVMYCHSYSNLIPLSFVLGFYVGIIIERWWNQYITVPWPDPLAVYVSALVRGQDE 120
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
GRLMRRTI+RYVCL LTMVL+MIS
Sbjct: 121 HGRLMRRTIMRYVCLALTMVLSMIS 145
>AE014296-2496|AAF49648.1| 535|Drosophila melanogaster CG12327-PA
protein.
Length = 535
Score = 173 bits (420), Expect = 3e-43
Identities = 81/145 (55%), Positives = 95/145 (65%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTV+YT EVATC FG F K+L RWR SI + K
Sbjct: 1 MTVSYTAEVATCSHFGCFWKLLMRWRASIYKIIWVDLLAFLSCFYFMAVIYRYALRDVDK 60
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 666
FE IV YCH + N+IPLSFVLGFYV +++ RWWNQY T+PWPD +AV+VSA + GQDE
Sbjct: 61 PVFEDIVMYCHSYSNLIPLSFVLGFYVGIIIERWWNQYITVPWPDPLAVYVSALVRGQDE 120
Query: 667 RGRLMRRTIVRYVCLCLTMVLTMIS 741
GRLMRRTI+RYVCL LTMVL+MIS
Sbjct: 121 HGRLMRRTIMRYVCLALTMVLSMIS 145
>AE014296-2495|AAF49649.2| 460|Drosophila melanogaster CG7259-PA
protein.
Length = 460
Score = 132 bits (318), Expect = 6e-31
Identities = 53/79 (67%), Positives = 68/79 (86%)
Frame = +1
Query: 505 VNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDERGRLMR 684
++YC +G++IPLSFVLGF+V +VMNRWW+QYTTIPWPD IA+ +S +IHG D+R R+MR
Sbjct: 1 MSYCEKNGSLIPLSFVLGFFVRIVMNRWWDQYTTIPWPDGIAILISTSIHGSDDRARVMR 60
Query: 685 RTIVRYVCLCLTMVLTMIS 741
RTI+RYVCLC +V TMIS
Sbjct: 61 RTILRYVCLCQVIVFTMIS 79
>BT010012-1|AAQ22481.1| 809|Drosophila melanogaster RE18408p
protein.
Length = 809
Score = 114 bits (274), Expect = 1e-25
Identities = 59/150 (39%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTV+Y GEV FG F K+L++WRGS+ E+ +
Sbjct: 1 MTVSYAGEVPNGSSFGCFWKILWKWRGSVYKLIWRELVAYLCLYYTINVIYRFGLTESQQ 60
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHG--- 657
F+ I Y IP+SFVLGFYV +V+ RWW QY +PWPD++A+F+SA I
Sbjct: 61 AIFKKIRLYFGQQSESIPMSFVLGFYVNLVVKRWWEQYRLLPWPDTLALFISAAIPNSNG 120
Query: 658 --QDERGRLMRRTIVRYVCLCLTMVLTMIS 741
+E GRLMRR I+RY+ L + L IS
Sbjct: 121 GVNNETGRLMRRNIMRYMVLAYVITLQRIS 150
>AE014296-1106|AAF50668.2| 809|Drosophila melanogaster CG10173-PA
protein.
Length = 809
Score = 114 bits (274), Expect = 1e-25
Identities = 59/150 (39%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Frame = +1
Query: 307 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 486
MTV+Y GEV FG F K+L++WRGS+ E+ +
Sbjct: 1 MTVSYAGEVPNGSSFGCFWKILWKWRGSVYKLIWRELVAYLCLYYTINVIYRFGLTESQQ 60
Query: 487 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHG--- 657
F+ I Y IP+SFVLGFYV +V+ RWW QY +PWPD++A+F+SA I
Sbjct: 61 AIFKKIRLYFGQQSESIPMSFVLGFYVNLVVKRWWEQYRLLPWPDTLALFISAAIPNSNG 120
Query: 658 --QDERGRLMRRTIVRYVCLCLTMVLTMIS 741
+E GRLMRR I+RY+ L + L IS
Sbjct: 121 GVNNETGRLMRRNIMRYMVLAYVITLQRIS 150
>BT025894-1|ABG02138.1| 113|Drosophila melanogaster IP02836p
protein.
Length = 113
Score = 70.9 bits (166), Expect = 2e-12
Identities = 44/94 (46%), Positives = 53/94 (56%)
Frame = -1
Query: 734 IVNTIVRQRHT*RTIVRRINLPRSSCPCIVADTKTAIESGHGIVVY*FHQRFITTVT*KP 555
+VNTI RHT IVR I L SS P I+ K AI SG G+VVY H RFIT +T P
Sbjct: 1 MVNTITWHRHTYLRIVRLITLALSSEPWILVLIKMAIPSGQGMVVYWSHHRFITILTKNP 60
Query: 554 STNDKGITFPWK*Q*FTIPSNVLFAFSSRSKRYV 453
TND G+ P+ Q + S L S ++RYV
Sbjct: 61 KTNDNGMREPFFSQYDIMASKNLLPSSFTNRRYV 94
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,212,806
Number of Sequences: 53049
Number of extensions: 640264
Number of successful extensions: 1250
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -