Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3e01
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.4  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 15/66 (22%), Positives = 28/66 (42%)
 Frame = +1

Query: 76  NFYPPFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF 255
           +F P  S+  + +  +  D + K+ V N G N        +  ++    N W+ RN    
Sbjct: 463 DFQPRGSVFVRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDM 522

Query: 256 AFVEFE 273
            F+E +
Sbjct: 523 -FIELD 527


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -1

Query: 248 GGFRATHTLRMLPYLENIFSISYLD--ALVPKLPTYTLQ 138
           G F+A + L  L  L N+ S  Y D  AL P L    L+
Sbjct: 206 GAFKAENLLVTLTVLPNVNSTVYYDPRALSPNLEFVVLE 244


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 418 SMIGGGDYDCVTC 380
           S++  G+Y CVTC
Sbjct: 864 SIVSLGEYKCVTC 876


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -1

Query: 638 LLAIVYKLLHTHFHMYTLKTISLSHCSSKICTTSQYLVLL 519
           L  +V + ++    M  L  + LSHC+S +      ++LL
Sbjct: 224 LTPVVSEPIYDKKAMSDLMIVKLSHCNSYVDGGRNEIILL 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,056
Number of Sequences: 336
Number of extensions: 3361
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)