Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3d24
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058552-1|AAL13781.1| 508|Drosophila melanogaster LD24726p pro... 238 5e-63
AE014296-3711|AAF51855.3| 508|Drosophila melanogaster CG11241-P... 237 8e-63
AY061111-1|AAL28659.1| 494|Drosophila melanogaster LD09584p pro... 103 3e-22
AE014296-2311|AAF49794.2| 494|Drosophila melanogaster CG8745-PA... 103 3e-22
BT011486-1|AAR99144.1| 82|Drosophila melanogaster RE01061p pro... 98 1e-20
AY047517-1|AAK77249.1| 431|Drosophila melanogaster GH01984p pro... 67 2e-11
AE014296-3193|AAF49127.1| 431|Drosophila melanogaster CG8782-PA... 67 2e-11
AY113591-1|AAM29596.1| 486|Drosophila melanogaster RH42429p pro... 36 0.070
AE014296-3265|AAN11644.1| 486|Drosophila melanogaster CG7433-PB... 32 0.65
AE014296-3264|AAF49081.1| 486|Drosophila melanogaster CG7433-PA... 32 0.65
AY051510-1|AAK92934.1| 385|Drosophila melanogaster GH16429p pro... 31 1.5
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r... 31 1.5
AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,... 31 1.5
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,... 31 1.5
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,... 31 1.5
AE013599-609|AAF59120.2| 385|Drosophila melanogaster CG8707-PA ... 31 1.5
AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 prote... 29 4.6
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA... 29 4.6
BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p pro... 29 6.1
AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-P... 29 6.1
AY129449-1|AAM76191.1| 832|Drosophila melanogaster LD32019p pro... 29 8.0
AE014296-1291|AAS65059.1| 1577|Drosophila melanogaster CG7526-PB... 29 8.0
AE014296-1290|AAF50538.3| 1577|Drosophila melanogaster CG7526-PA... 29 8.0
>AY058552-1|AAL13781.1| 508|Drosophila melanogaster LD24726p
protein.
Length = 508
Score = 238 bits (583), Expect = 5e-63
Identities = 104/192 (54%), Positives = 141/192 (73%), Gaps = 1/192 (0%)
Frame = +1
Query: 124 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLD 303
+MP + P Y G +Y+Q+ + + ++ P++ +KKP+++ GHMQWLYD++G+RYLD
Sbjct: 42 EMPDCNHRPAAYEGSTYEQILKTRRNHLTPNLLTHFKKPLVIHAGHMQWLYDHEGRRYLD 101
Query: 304 LFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYL 483
+FGGIVTVSVGHCHPKVN AL +Q LWHTTN+Y HPKI+EY E+L AK PGDL V
Sbjct: 102 MFGGIVTVSVGHCHPKVNQALSEQTAKLWHTTNIYMHPKIHEYAERLVAKFPGDLKSVCF 161
Query: 484 VNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIP-VPPGFYH 660
VNSGSEAN+LA L+A+ YTGN DI+SL+ YHG + MGLTA ++R +P V G H
Sbjct: 162 VNSGSEANDLAMLMARLYTGNQDILSLRNCYHGMSPYTMGLTAHSTWRFPLPGVNSGLVH 221
Query: 661 AVHPDPFRGAFG 696
++PDP++G +G
Sbjct: 222 VMNPDPYQGIWG 233
>AE014296-3711|AAF51855.3| 508|Drosophila melanogaster CG11241-PA
protein.
Length = 508
Score = 237 bits (581), Expect = 8e-63
Identities = 104/192 (54%), Positives = 141/192 (73%), Gaps = 1/192 (0%)
Frame = +1
Query: 124 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLD 303
+MP + P Y G +Y+Q+ + + ++ P++ +KKP+++ GHMQWLYD++G+RYLD
Sbjct: 42 EMPDCNHRPAAYEGSTYEQILKTRRNHLTPNLLAHFKKPLVIHAGHMQWLYDHEGRRYLD 101
Query: 304 LFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYL 483
+FGGIVTVSVGHCHPKVN AL +Q LWHTTN+Y HPKI+EY E+L AK PGDL V
Sbjct: 102 MFGGIVTVSVGHCHPKVNQALSEQTAKLWHTTNIYMHPKIHEYAERLVAKFPGDLKSVCF 161
Query: 484 VNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIP-VPPGFYH 660
VNSGSEAN+LA L+A+ YTGN DI+SL+ YHG + MGLTA ++R +P V G H
Sbjct: 162 VNSGSEANDLAMLMARLYTGNQDILSLRNCYHGMSPYTMGLTAHSTWRFPLPGVNSGLVH 221
Query: 661 AVHPDPFRGAFG 696
++PDP++G +G
Sbjct: 222 VMNPDPYQGIWG 233
>AY061111-1|AAL28659.1| 494|Drosophila melanogaster LD09584p
protein.
Length = 494
Score = 103 bits (246), Expect = 3e-22
Identities = 54/153 (35%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Frame = +1
Query: 238 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 417
P+ + +G Q+++D +G RYLD + VGHCHP+V A Q+ + T N + H
Sbjct: 41 PLKIVRGQGQYMFDEEGTRYLDCINNVA--HVGHCHPEVVRAGALQMATI-STNNRFLHD 97
Query: 418 KIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSL 597
++ + L +K+P L+V + VNSGSEAN+LA LA+ +T D+I+L +YHG+ S+
Sbjct: 98 ELVQCARTLTSKMPEPLSVCFFVNSGSEANDLALRLARNFTKRQDVITLDHAYHGHLQSV 157
Query: 598 MGLTATQSYRMAIPVPPGFYH-AVHPDPFRGAF 693
M ++ + + P + H A PD + G F
Sbjct: 158 MEVSPYKFNQPGGEAKPDYVHVAPCPDVYGGKF 190
>AE014296-2311|AAF49794.2| 494|Drosophila melanogaster CG8745-PA
protein.
Length = 494
Score = 103 bits (246), Expect = 3e-22
Identities = 54/153 (35%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Frame = +1
Query: 238 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 417
P+ + +G Q+++D +G RYLD + VGHCHP+V A Q+ + T N + H
Sbjct: 41 PLKIVRGQGQYMFDEEGTRYLDCINNVA--HVGHCHPEVVRAGALQMATI-STNNRFLHD 97
Query: 418 KIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSL 597
++ + L +K+P L+V + VNSGSEAN+LA LA+ +T D+I+L +YHG+ S+
Sbjct: 98 ELVQCARTLTSKMPEPLSVCFFVNSGSEANDLALRLARNFTKRQDVITLDHAYHGHLQSV 157
Query: 598 MGLTATQSYRMAIPVPPGFYH-AVHPDPFRGAF 693
M ++ + + P + H A PD + G F
Sbjct: 158 MEVSPYKFNQPGGEAKPDYVHVAPCPDVYGGKF 190
>BT011486-1|AAR99144.1| 82|Drosophila melanogaster RE01061p
protein.
Length = 82
Score = 97.9 bits (233), Expect = 1e-20
Identities = 38/75 (50%), Positives = 57/75 (76%)
Frame = +1
Query: 124 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLD 303
+MP + P Y G +Y+Q+ + + ++ P++ +KKP+++ GHMQWLYD++G+RYLD
Sbjct: 8 EMPDCNHRPAAYEGSTYEQILKTRRNHLTPNLLAHFKKPLVIHAGHMQWLYDHEGRRYLD 67
Query: 304 LFGGIVTVSVGHCHP 348
+FGGIVTVSVGHCHP
Sbjct: 68 MFGGIVTVSVGHCHP 82
>AY047517-1|AAK77249.1| 431|Drosophila melanogaster GH01984p
protein.
Length = 431
Score = 67.3 bits (157), Expect = 2e-11
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Frame = +1
Query: 223 NAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 402
N + PV LT+G +++D +GKRY D V+ GHCHPK+ AAL Q L T+
Sbjct: 48 NYHPLPVALTKGEGVFVWDVEGKRYFDYLSAYSAVNQGHCHPKIVAALTAQASKLALTSR 107
Query: 403 LYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY--------TGNLDII 558
+ + EY E+ KL G + V +N+G E E A LA+ + II
Sbjct: 108 AFYSDVLGEY-EEYVTKLFG-FDKVLPMNTGVEGGETACKLARKWGYLEKKIPANQAKII 165
Query: 559 SLQTSYHGYT-SSLMGLTATQSYRMAIPVPPGF 654
+ ++ G T S++ SY P PGF
Sbjct: 166 FARNNFWGRTLSAVSASNDPSSYEGFGPFMPGF 198
>AE014296-3193|AAF49127.1| 431|Drosophila melanogaster CG8782-PA
protein.
Length = 431
Score = 67.3 bits (157), Expect = 2e-11
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Frame = +1
Query: 223 NAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 402
N + PV LT+G +++D +GKRY D V+ GHCHPK+ AAL Q L T+
Sbjct: 48 NYHPLPVALTKGEGVFVWDVEGKRYFDYLSAYSAVNQGHCHPKIVAALTAQASKLALTSR 107
Query: 403 LYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY--------TGNLDII 558
+ + EY E+ KL G + V +N+G E E A LA+ + II
Sbjct: 108 AFYSDVLGEY-EEYVTKLFG-FDKVLPMNTGVEGGETACKLARKWGYLEKKIPANQAKII 165
Query: 559 SLQTSYHGYT-SSLMGLTATQSYRMAIPVPPGF 654
+ ++ G T S++ SY P PGF
Sbjct: 166 FARNNFWGRTLSAVSASNDPSSYEGFGPFMPGF 198
>AY113591-1|AAM29596.1| 486|Drosophila melanogaster RH42429p
protein.
Length = 486
Score = 35.5 bits (78), Expect = 0.070
Identities = 28/128 (21%), Positives = 55/128 (42%)
Frame = +1
Query: 268 WLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLA 447
++YD DG LD++ I +V +G+ HP++ ++ ++ L P + +
Sbjct: 72 YIYDVDGNILLDVYTQISSVPLGYNHPRLYKVFNNEQNM----KTLINRPALGVFP---G 124
Query: 448 AKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYR 627
+ PG L+ V L + N++ T++ + + S+ Y LT +
Sbjct: 125 KEWPGKLHSVLLNIAPKGLNKITTMMCGSCSNENAYKSIFIWYQNKLRGNAPLTEQEKNS 184
Query: 628 MAIPVPPG 651
I +PPG
Sbjct: 185 CMINIPPG 192
>AE014296-3265|AAN11644.1| 486|Drosophila melanogaster CG7433-PB,
isoform B protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.65
Identities = 27/128 (21%), Positives = 54/128 (42%)
Frame = +1
Query: 268 WLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLA 447
++YD DG LD++ I +V +G+ HP++ ++ ++ L P + +
Sbjct: 72 YIYDVDGNILLDVYTQISSVPLGYNHPRLYKVFNNEQNL----KTLINRPALGVFP---G 124
Query: 448 AKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYR 627
+ P L+ V L + N++ T++ + + S+ Y LT +
Sbjct: 125 KEWPEKLHSVLLNIAPKGLNKITTMMCGSCSNENAYKSIFIWYQNKLRGNAPLTEQEKNS 184
Query: 628 MAIPVPPG 651
I +PPG
Sbjct: 185 CMINIPPG 192
>AE014296-3264|AAF49081.1| 486|Drosophila melanogaster CG7433-PA,
isoform A protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.65
Identities = 27/128 (21%), Positives = 54/128 (42%)
Frame = +1
Query: 268 WLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLA 447
++YD DG LD++ I +V +G+ HP++ ++ ++ L P + +
Sbjct: 72 YIYDVDGNILLDVYTQISSVPLGYNHPRLYKVFNNEQNL----KTLINRPALGVFP---G 124
Query: 448 AKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSSLMGLTATQSYR 627
+ P L+ V L + N++ T++ + + S+ Y LT +
Sbjct: 125 KEWPEKLHSVLLNIAPKGLNKITTMMCGSCSNENAYKSIFIWYQNKLRGNAPLTEQEKNS 184
Query: 628 MAIPVPPG 651
I +PPG
Sbjct: 185 CMINIPPG 192
>AY051510-1|AAK92934.1| 385|Drosophila melanogaster GH16429p
protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.5
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Frame = +1
Query: 352 VNAALKDQLDVLWHTTNLYRHPKIYE----YVEQLAAKLPGDLNV--VYLVNSGSEANEL 513
+N A DQ+ + +H T++Y H I+E V++L +LP N+ +++ NSG E L
Sbjct: 182 LNEAGLDQIHLSFHLTSIYDH-SIFEAFSKVVQKLIPQLPTLENLLNIFIPNSGIEKAFL 240
Query: 514 ATLLAKAY 537
+++K Y
Sbjct: 241 FDVVSKIY 248
>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
remodeling factor largesubunit NURF301 protein.
Length = 2669
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 403 LYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAK 531
L R K+ E EQ+A+K+P D+ + + + + AN T L K
Sbjct: 864 LDRRLKLAEVEEQMASKIPSDMKPLLVSSQNNTANSKQTFLEK 906
>AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,
isoform C protein.
Length = 2159
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 403 LYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAK 531
L R K+ E EQ+A+K+P D+ + + + + AN T L K
Sbjct: 864 LDRRLKLAEVEEQMASKIPSDMKPLLVSSQNNTANSKQTFLEK 906
>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
isoform A protein.
Length = 2669
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 403 LYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAK 531
L R K+ E EQ+A+K+P D+ + + + + AN T L K
Sbjct: 864 LDRRLKLAEVEEQMASKIPSDMKPLLVSSQNNTANSKQTFLEK 906
>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
isoform B protein.
Length = 2649
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 403 LYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAK 531
L R K+ E EQ+A+K+P D+ + + + + AN T L K
Sbjct: 864 LDRRLKLAEVEEQMASKIPSDMKPLLVSSQNNTANSKQTFLEK 906
>AE013599-609|AAF59120.2| 385|Drosophila melanogaster CG8707-PA
protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.5
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Frame = +1
Query: 352 VNAALKDQLDVLWHTTNLYRHPKIYE----YVEQLAAKLPGDLNV--VYLVNSGSEANEL 513
+N A DQ+ + +H T++Y H I+E V++L +LP N+ +++ NSG E L
Sbjct: 182 LNEAGLDQIHLSFHLTSIYDH-SIFEAFSKVVQKLIPQLPTLENLLNIFIPNSGIEKAFL 240
Query: 514 ATLLAKAY 537
+++K Y
Sbjct: 241 FDVVSKIY 248
>AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 protein
protein.
Length = 2382
Score = 29.5 bits (63), Expect = 4.6
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 142 FVPRPYTGPSYQQVEQMKGVYMPPS-ITNAYKKPVLLTQGHMQWLYDNDGKRYL 300
+ PR YQ ++ G Y PP+ + AY P L G+ L N G R L
Sbjct: 1230 YQPRVDGNRGYQPPNELNGGYQPPNELNGAYPAPSQLNGGYQPPLEGNLGYRPL 1283
>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
isoform A protein.
Length = 2786
Score = 29.5 bits (63), Expect = 4.6
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 142 FVPRPYTGPSYQQVEQMKGVYMPPS-ITNAYKKPVLLTQGHMQWLYDNDGKRYL 300
+ PR YQ ++ G Y PP+ + AY P L G+ L N G R L
Sbjct: 1221 YQPRVDGNRGYQPPNELNGGYQPPNELNGAYPAPSQLNGGYQPPLEGNLGYRPL 1274
>BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p
protein.
Length = 2286
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 282 RRQEIPGSVRWNRHRLRGPLSSKSKCSPQRSTRCTVAYDQPVQTSE 419
++Q P + WN S ++CS + + +Y P+QTS+
Sbjct: 717 QQQFCPSGLHWNNEAKGCDWPSSAQCSLKLDQHLSTSYPNPIQTSK 762
>AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-PA
protein.
Length = 2286
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 282 RRQEIPGSVRWNRHRLRGPLSSKSKCSPQRSTRCTVAYDQPVQTSE 419
++Q P + WN S ++CS + + +Y P+QTS+
Sbjct: 717 QQQFCPSGLHWNNEAKGCDWPSSAQCSLKLDQHLSTSYPNPIQTSK 762
>AY129449-1|AAM76191.1| 832|Drosophila melanogaster LD32019p
protein.
Length = 832
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 337 HCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSE 501
+C P N L +QL +W++ P + VEQ+ + NVV L+++G +
Sbjct: 455 NCQPFGNGLLGNQLSPMWNSPKTVT-PHQIQNVEQIRPYINCPENVVILLHAGEQ 508
>AE014296-1291|AAS65059.1| 1577|Drosophila melanogaster CG7526-PB,
isoform B protein.
Length = 1577
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 337 HCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSE 501
+C P N L +QL +W++ P + VEQ+ + NVV L+++G +
Sbjct: 1200 NCQPFGNGLLGNQLSPMWNSPKTVT-PHQIQNVEQIRPYINCPENVVILLHAGEQ 1253
>AE014296-1290|AAF50538.3| 1577|Drosophila melanogaster CG7526-PA,
isoform A protein.
Length = 1577
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 337 HCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSE 501
+C P N L +QL +W++ P + VEQ+ + NVV L+++G +
Sbjct: 1200 NCQPFGNGLLGNQLSPMWNSPKTVT-PHQIQNVEQIRPYINCPENVVILLHAGEQ 1253
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,473,758
Number of Sequences: 53049
Number of extensions: 826645
Number of successful extensions: 2942
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2938
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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