Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3d16
(627 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7RTF4 Cluster: Putative uncharacterized protein PY0004... 41 0.021
UniRef50_O96253 Cluster: Putative uncharacterized protein PFB080... 37 0.45
UniRef50_A7BRN0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.60
UniRef50_Q7R8C7 Cluster: Putative uncharacterized protein PY0729... 36 1.1
UniRef50_Q7RME7 Cluster: Putative uncharacterized protein PY0223... 34 3.2
UniRef50_Q5ZRX6 Cluster: Putative uncharacterized protein; n=4; ... 33 4.2
UniRef50_Q6BIK7 Cluster: Similarities with CA1969|IPF18579.3f Ca... 33 4.2
UniRef50_Q99233 Cluster: CDNA52 product; n=1; Trypanosoma cruzi|... 33 5.6
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 33 5.6
UniRef50_Q96PX8 Cluster: SLIT and NTRK-like protein 1 precursor;... 33 5.6
UniRef50_Q600N1 Cluster: Putative uncharacterized protein; n=3; ... 33 7.4
UniRef50_Q8I436 Cluster: Putative uncharacterized protein PFE032... 32 9.8
>UniRef50_Q7RTF4 Cluster: Putative uncharacterized protein PY00040;
n=9; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00040 - Plasmodium yoelii yoelii
Length = 5229
Score = 41.1 bits (92), Expect = 0.021
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = -2
Query: 368 IREHFLNFANLITLSCHKNKIHKDQTSKIRSILCSR--HYFSNKKLADEARDYRYSLHTY 195
I++H+ ++ N H N+I+KD+ +++R + +YF NKK++ E D+ Y H
Sbjct: 1436 IKKHYNDYCNY-QRDEHYNEIYKDEVNRLRERETNHQGNYFKNKKISLENNDFNYGSHIV 1494
Query: 194 KYINT 180
Y N+
Sbjct: 1495 NYKNS 1499
>UniRef50_O96253 Cluster: Putative uncharacterized protein PFB0800c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0800c - Plasmodium falciparum
(isolate 3D7)
Length = 1817
Score = 36.7 bits (81), Expect = 0.45
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 5/193 (2%)
Frame = -3
Query: 592 KIYLH-FLYILGYNKIMRDSKLFH*NKINIPGYIKI*HTKISTE*I---IYCNYVYMAAG 425
KIY + F YI +++ S L H K+ I YIK + K + +Y N++Y
Sbjct: 1373 KIYKNKFFYIYNGLDLLKKSYLVHIKKLYINSYIKSYNNKKKNNNVNGDVYNNFMYKYNI 1432
Query: 424 LLNTIILDKRKQFNFLFTIFVSIS*TSQI**PCHVTKIKSTKIKLQKFVLYCVVGITLAT 245
N + +K+ F +T +S+ + T I S L KF YC + + +
Sbjct: 1433 YDNIDYIFIKKKNLFCYTNHLSL---------LYFTYIYS----LNKF-YYCTLYYNI-S 1477
Query: 244 KS*RTKLEITGIHYILTNI*IPTIQY*QATHDFMKFFKLYIYNI-DNAKFLFYYFQKEYV 68
K K+ I IH+ N I + Q + ++KFF+L + +I +++F Y+
Sbjct: 1478 KCFYYKINIENIHF--KNKIILFFIFTQCKYIYIKFFRLLVQSIFSSSEFQKVGKLSLYI 1535
Query: 67 LLELVIINIKNKK 29
L ++++ +KN +
Sbjct: 1536 LSNIILLLVKNSR 1548
>UniRef50_A7BRN0 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
Beggiatoa sp. PS
Length = 86
Score = 36.3 bits (80), Expect = 0.60
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = -2
Query: 329 LSCHKNKIH----KDQTSKIRSILCSRHYFSNK--KLA-DEARDYRYSLHTYKYINTYNS 171
LSCH+NK+H K +I +C RH F NK LA EAR ++ K T+N
Sbjct: 11 LSCHRNKLHLQIIKRSLGEIEKRICQRHDFQNKFWTLARGEARKVESKIYFGKKKCTFNH 70
Query: 170 ILT 162
I T
Sbjct: 71 IPT 73
>UniRef50_Q7R8C7 Cluster: Putative uncharacterized protein PY07296;
n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY07296 - Plasmodium yoelii yoelii
Length = 1052
Score = 35.5 bits (78), Expect = 1.1
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = -2
Query: 356 FLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKLADEARDYRYSLHTYKYINTY 177
F NF N+ LS I++ + SKI I YF+N K D+ +H ++
Sbjct: 785 FTNFENMTVLSDSNYCIYRKKKSKINKINSKLFYFNNDKKVFIFDDHFKEIHK---LDKK 841
Query: 176 NSILTSNSRFY 144
N+I+++++ FY
Sbjct: 842 NNIISNSNNFY 852
>UniRef50_Q7RME7 Cluster: Putative uncharacterized protein PY02234;
n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY02234 - Plasmodium yoelii yoelii
Length = 1107
Score = 33.9 bits (74), Expect = 3.2
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -2
Query: 305 HKDQTSKIRSILCSRHYFSNKKLADEARDYRYSLHTYKYINTYNSILTSNSRFYE 141
HK++ + + + H + NKK D R Y Y L YK + N I ++ E
Sbjct: 289 HKNENMLVVAYYFTYHSYMNKKFLDFKRIYNYDLLIYKLLLNINKIKKKRKKYKE 343
>UniRef50_Q5ZRX6 Cluster: Putative uncharacterized protein; n=4;
Legionella pneumophila|Rep: Putative uncharacterized
protein - Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 655
Score = 33.5 bits (73), Expect = 4.2
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = -3
Query: 157 THDFMKFFK-LYIYNIDNAKFLF----YYFQKEYVLLEL-VIINIKNKKSV 23
T + KFFK LY + ++N FL+ Y KEY LLEL V+IN+ V
Sbjct: 253 TAEIHKFFKILYQFKLENINFLYGVKILYHGKEYYLLELFVLINMAQSYDV 303
>UniRef50_Q6BIK7 Cluster: Similarities with CA1969|IPF18579.3f Candida
albicans IPF18579.3f unknown function; n=1; Debaryomyces
hansenii|Rep: Similarities with CA1969|IPF18579.3f
Candida albicans IPF18579.3f unknown function -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 1001
Score = 33.5 bits (73), Expect = 4.2
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 257 YFSNKKLADEARDYRYSLHTYKYINTYNSILTSNSRFY 144
+ SN++ ++ Y + LH Y Y N YN+++ S F+
Sbjct: 890 FLSNQQNHSQSHHYHHYLHHYNYSNYYNTLMMKTSSFH 927
>UniRef50_Q99233 Cluster: CDNA52 product; n=1; Trypanosoma
cruzi|Rep: CDNA52 product - Trypanosoma cruzi
Length = 86
Score = 33.1 bits (72), Expect = 5.6
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = -2
Query: 260 HYFSNKKLADEARDYRYSLHTYKYINTYNSIL 165
HY++N +L++ +R Y + +K+INTY+SIL
Sbjct: 40 HYYTNTQLSN-SRCTSYPIQLHKFINTYSSIL 70
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 33.1 bits (72), Expect = 5.6
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 89 VK*KFGIINVVNVKFKKLHKIVSCLSILNCRYLYICKYVMNTCNL 223
+K +F I N +N++F L + CL NC+ + + N NL
Sbjct: 183 IKLQFKIYNYLNIRFLLLKYLFECLGYFNCKIIIYYNIIHNRYNL 227
>UniRef50_Q96PX8 Cluster: SLIT and NTRK-like protein 1 precursor;
n=18; Euteleostomi|Rep: SLIT and NTRK-like protein 1
precursor - Homo sapiens (Human)
Length = 696
Score = 33.1 bits (72), Expect = 5.6
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = -2
Query: 377 IYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKLADE-ARDYRYSL 204
I++IR+ HF+++ NLI L N I + + +++L R + + D +R+ L
Sbjct: 387 IHSIRKSHFVDYKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGL 446
Query: 203 HTYKYINT-YNSI 168
+Y+N YN+I
Sbjct: 447 QNLEYLNVEYNAI 459
>UniRef50_Q600N1 Cluster: Putative uncharacterized protein; n=3;
Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
protein - Mycoplasma hyopneumoniae (strain 232)
Length = 382
Score = 32.7 bits (71), Expect = 7.4
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = -3
Query: 580 HFLY--ILGYNKIMRDSKLFH*NKINIPGYIKI*HT 479
H +Y + GYNK+ R+++LF N ++ P +KI H+
Sbjct: 337 HNIYKIVAGYNKLARETRLFDQNVVDSPNILKIKHS 372
>UniRef50_Q8I436 Cluster: Putative uncharacterized protein PFE0325w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFE0325w - Plasmodium falciparum
(isolate 3D7)
Length = 3008
Score = 32.3 bits (70), Expect = 9.8
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = -2
Query: 383 FFIYNIREHFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKLADEARDYRYSL 204
F + N L+ +N+ +SC+KNK + D +K IL S ++ N K E ++ SL
Sbjct: 50 FILNNNENESLDISNVFLISCNKNK-NDDDKNKNNHIL-SHNHIHNDKYKMEHEEF-ISL 106
Query: 203 HTYKYINTYNSILTSNS 153
K NT + +N+
Sbjct: 107 ENNKNSNTNDDHNNNNN 123
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,289,905
Number of Sequences: 1657284
Number of extensions: 10166544
Number of successful extensions: 24140
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24132
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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