Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3d16
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.8  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +2

Query: 146  KIVSCLSIL-NCRYLYICKY 202
            KI  C ++L NC YL++C +
Sbjct: 1120 KIRICWNVLLNCVYLFLCGF 1139


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 384 LNCFLLSRMIVFRSPAAMYT*LQ*IIYSVLIFVCYIFIYPGMFILFQWNNLL 539
           L+   L  +  F S   ++T +  + Y VLI +  I+ +   FILF  + LL
Sbjct: 204 LHLLFLPCIYYFYSAFIIFT-IHLLFYCVLIILLCIYYFYYAFILFTVHLLL 254



 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 456 IIYSVLIFVCYIFIYPGMFILF 521
           II+++ +  C  FI+  M +LF
Sbjct: 174 IIFTMHLLFCCAFIFFNMHLLF 195


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 604 VVYFKIYLHFLYIL 563
           V YF+ Y+HF Y L
Sbjct: 152 VEYFQNYIHFFYQL 165


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 219 LQVFITYLQIYKYLQFNIDK 160
           LQV +TY   Y  +  +ID+
Sbjct: 103 LQVVVTYASTYVLVALSIDR 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,047
Number of Sequences: 336
Number of extensions: 3228
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)