Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3d16
(627 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051738-1|AAH51738.1| 696|Homo sapiens SLIT and NTRK-like fami... 33 0.63
AY358289-1|AAQ88656.1| 696|Homo sapiens LLWI233 protein. 33 0.83
AL355481-1|CAC37488.1| 696|Homo sapiens SLIT and NTRK-like fami... 33 0.83
AB067497-1|BAB67803.1| 760|Homo sapiens KIAA1910 protein protein. 33 0.83
X78578-1|CAA55316.1| 1121|Homo sapiens serine /threonine specifi... 31 3.3
BC126453-1|AAI26454.1| 1122|Homo sapiens protein phosphatase 1, ... 31 3.3
BC126451-1|AAI26452.1| 1122|Homo sapiens protein phosphatase 1, ... 31 3.3
AF024578-1|AAB94596.1| 1122|Homo sapiens type-1 protein phosphat... 31 3.3
AC093598-1|AAP22361.1| 260|Homo sapiens unknown protein. 31 3.3
>BC051738-1|AAH51738.1| 696|Homo sapiens SLIT and NTRK-like family,
member 1 protein.
Length = 696
Score = 33.5 bits (73), Expect = 0.63
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = -2
Query: 377 IYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKLADE-ARDYRYSL 204
I++IR+ HF+++ NLI L N I + + +++L R + + D +R+ L
Sbjct: 387 IHSIRKSHFVDYKNLILLDLGNNNIATVENNSFKNLLDLRWLYMDSNYLDTLSREKFAGL 446
Query: 203 HTYKYINT-YNSI 168
+Y+N YN+I
Sbjct: 447 QNLEYLNVEYNAI 459
>AY358289-1|AAQ88656.1| 696|Homo sapiens LLWI233 protein.
Length = 696
Score = 33.1 bits (72), Expect = 0.83
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = -2
Query: 377 IYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKLADE-ARDYRYSL 204
I++IR+ HF+++ NLI L N I + + +++L R + + D +R+ L
Sbjct: 387 IHSIRKSHFVDYKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGL 446
Query: 203 HTYKYINT-YNSI 168
+Y+N YN+I
Sbjct: 447 QNLEYLNVEYNAI 459
>AL355481-1|CAC37488.1| 696|Homo sapiens SLIT and NTRK-like family,
member 1 protein.
Length = 696
Score = 33.1 bits (72), Expect = 0.83
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = -2
Query: 377 IYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKLADE-ARDYRYSL 204
I++IR+ HF+++ NLI L N I + + +++L R + + D +R+ L
Sbjct: 387 IHSIRKSHFVDYKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGL 446
Query: 203 HTYKYINT-YNSI 168
+Y+N YN+I
Sbjct: 447 QNLEYLNVEYNAI 459
>AB067497-1|BAB67803.1| 760|Homo sapiens KIAA1910 protein protein.
Length = 760
Score = 33.1 bits (72), Expect = 0.83
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = -2
Query: 377 IYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKLADE-ARDYRYSL 204
I++IR+ HF+++ NLI L N I + + +++L R + + D +R+ L
Sbjct: 451 IHSIRKSHFVDYKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGL 510
Query: 203 HTYKYINT-YNSI 168
+Y+N YN+I
Sbjct: 511 QNLEYLNVEYNAI 523
>X78578-1|CAA55316.1| 1121|Homo sapiens serine /threonine specific
protein phosphatase protein.
Length = 1121
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 104 GIINVVNVKFKKLHKIVSCLSILNCRYLYICKYVMNTCN 220
GII V+NV F+KL + L Y + +YV N+C+
Sbjct: 143 GIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD 181
>BC126453-1|AAI26454.1| 1122|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 3A (glycogen and sarcopla
protein.
Length = 1122
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 104 GIINVVNVKFKKLHKIVSCLSILNCRYLYICKYVMNTCN 220
GII V+NV F+KL + L Y + +YV N+C+
Sbjct: 144 GIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD 182
>BC126451-1|AAI26452.1| 1122|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 3A (glycogen and sarcopla
protein.
Length = 1122
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 104 GIINVVNVKFKKLHKIVSCLSILNCRYLYICKYVMNTCN 220
GII V+NV F+KL + L Y + +YV N+C+
Sbjct: 144 GIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD 182
>AF024578-1|AAB94596.1| 1122|Homo sapiens type-1 protein phosphatase
skeletal muscle glycogen targeting subunit protein.
Length = 1122
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 104 GIINVVNVKFKKLHKIVSCLSILNCRYLYICKYVMNTCN 220
GII V+NV F+KL + L Y + +YV N+C+
Sbjct: 144 GIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD 182
>AC093598-1|AAP22361.1| 260|Homo sapiens unknown protein.
Length = 260
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 104 GIINVVNVKFKKLHKIVSCLSILNCRYLYICKYVMNTCN 220
GII V+NV F+KL + L Y + +YV N+C+
Sbjct: 144 GIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD 182
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,806,111
Number of Sequences: 237096
Number of extensions: 1437143
Number of successful extensions: 5525
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5525
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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