Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3d14
         (660 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q97PH6 Cluster: Conserved domain protein; n=10; Strepto...    36   0.86 
UniRef50_Q8IJR5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.5  

>UniRef50_Q97PH6 Cluster: Conserved domain protein; n=10;
           Streptococcus pneumoniae|Rep: Conserved domain protein -
           Streptococcus pneumoniae
          Length = 137

 Score = 35.9 bits (79), Expect = 0.86
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +2

Query: 266 IQFISISNLRFTIFVFKIRYRFETSSHRSVLSEATSNLFIFKLVIGMLLVQLYFKVTITF 445
           I FI+I+ +   +F F I  R ETS    +LS       IF L  G+LL  L  ++   F
Sbjct: 7   IHFIAIAVIDLLLFAFFIT-RLETSFEWLLLSG-----LIFFLAQGLLLFLLVVRLKHQF 60

Query: 446 -KMYVCFNKI*SFHYKRLYNVNFFLFVLI 529
            ++Y   NK   F+Y  +  ++F  FVL+
Sbjct: 61  AEIYPQINKKIRFYYLGVLTIDFLFFVLL 89


>UniRef50_Q8IJR5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 499

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +2

Query: 314 KIRYRFETSSHRSVLSEATSNLFIFKLVIGMLLVQLYFKVTITFKMYVCFNKI*SFHYKR 493
           KI+   ++  HR +   + SNLF FK  I ML ++  +++ + F          SF+Y  
Sbjct: 112 KIKSHEQSCEHRLISCSSCSNLFYFKNRIFMLTLKEKYQLNMRFSFTYY-----SFYYNL 166

Query: 494 LYNVNF 511
           L N NF
Sbjct: 167 LMNTNF 172


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,433,426
Number of Sequences: 1657284
Number of extensions: 7129010
Number of successful extensions: 15906
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15899
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)