Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3d06
         (273 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...   112   2e-27
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    26   0.22 
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          23   1.5  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          23   1.5  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          23   1.5  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           23   2.7  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            22   4.7  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    21   6.2  

>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score =  112 bits (270), Expect = 2e-27
 Identities = 46/56 (82%), Positives = 51/56 (91%)
 Frame = +3

Query: 60  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 227
           MG AN+WYSHPR+YGQGSR  R+CSN HG+IRKYGLNICRQCFREYA DIGF+KLD
Sbjct: 1   MGFANLWYSHPRKYGQGSRFWRACSNNHGMIRKYGLNICRQCFREYAKDIGFRKLD 56


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 165 NRTCGLSHACWSRIGMTEILVRICEGENTK--YLRGPF*EIK 46
           N+ C  S AC+  +  TEI V + E E T+   + GP+ +++
Sbjct: 241 NKDC-CSGACYKSVCSTEIRVGVLESELTRPSVINGPYIQVQ 281


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 92  SQIRTRISVMPILLQQAWLNPQVRFEHMQTVL 187
           +++R      P+LL +A LNP+   E M  ++
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 92  SQIRTRISVMPILLQQAWLNPQVRFEHMQTVL 187
           +++R      P+LL +A LNP+   E M  ++
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 92  SQIRTRISVMPILLQQAWLNPQVRFEHMQTVL 187
           +++R      P+LL +A LNP+   E M  ++
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 92  SQIRTRISVMPILLQQAWLNPQVRFEHMQTVL 187
           +++R      P+LL +A LNP+   E M  ++
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKSNREKMTQIM 124


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 65  AHFKKLNCFSLTSNKL 18
           +H+K++ C+SL    L
Sbjct: 174 SHYKRIQCYSLKQRSL 189


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 158  LAD*AMPVGAGSA*PRSLSVSARVRIPNIC 69
            L + + P G G+   R    S  V +PN C
Sbjct: 1369 LLESSQPAGGGTPRGRHSWASNSVEVPNTC 1398


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,368
Number of Sequences: 2352
Number of extensions: 6563
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 15730956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)