Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3d05
         (460 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    25   1.7  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   1.7  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    25   1.7  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    25   1.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   5.1  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 277 SQSNSTNPDDPCNCSKSRDVG 215
           S +NS NP  P NC++ R+ G
Sbjct: 28  SCNNSLNPRTPPNCARCRNHG 48


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 277 SQSNSTNPDDPCNCSKSRDVG 215
           S +NS NP  P NC++ R+ G
Sbjct: 28  SCNNSLNPRTPPNCARCRNHG 48


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 277 SQSNSTNPDDPCNCSKSRDVG 215
           S +NS NP  P NC++ R+ G
Sbjct: 28  SCNNSLNPRTPPNCARCRNHG 48


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 277 SQSNSTNPDDPCNCSKSRDVG 215
           S +NS NP  P NC++ R+ G
Sbjct: 28  SCNNSLNPRTPPNCARCRNHG 48


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 339  WLKHSFHQIEFYARFRFIFYDRKVTQQIRMTHVTAARVA 223
            W K + H  E++A     FY+  +TQ    +HV +  VA
Sbjct: 1741 WTKLTSHLKEYFA-----FYENFITQVHGTSHVMSGMVA 1774


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,114
Number of Sequences: 2352
Number of extensions: 8927
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)