Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3d01
(775 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009810-1|AAP88812.1| 591|Homo sapiens CDC23 (cell division cy... 137 4e-32
BC017713-1|AAH17713.1| 591|Homo sapiens CDC23 protein protein. 137 4e-32
AY603103-1|AAS99353.1| 591|Homo sapiens CDC23 (cell division cy... 137 4e-32
AF191341-1|AAF05755.1| 591|Homo sapiens anaphase-promoting comp... 137 4e-32
AF053977-1|AAC70920.1| 591|Homo sapiens cell division cycle pro... 137 4e-32
AB011472-1|BAA75628.1| 591|Homo sapiens CDC23 protein. 137 4e-32
AK223250-1|BAD96970.1| 591|Homo sapiens cell division cycle pro... 135 1e-31
BC010944-1|AAH10944.1| 145|Homo sapiens CDC23 protein protein. 85 2e-16
BC005258-1|AAH05258.1| 145|Homo sapiens CDC23 protein protein. 85 2e-16
AL133654-1|CAB63770.1| 833|Homo sapiens hypothetical protein pr... 33 1.1
BC033898-1|AAH33898.1| 468|Homo sapiens transmembrane protein 1... 31 3.5
>BT009810-1|AAP88812.1| 591|Homo sapiens CDC23 (cell division cycle
23, yeast, homolog) protein.
Length = 591
Score = 137 bits (332), Expect = 4e-32
Identities = 76/186 (40%), Positives = 105/186 (56%), Gaps = 5/186 (2%)
Frame = +3
Query: 219 DLTQVRIDILQGIRECNSRGLVQTTKWLAELNYALRDHKITSEEPSESLNEDITPEEKDA 398
DL +++ +L RGL+ ++KW AEL ++L + +P + E+ ++ DA
Sbjct: 22 DLREIKKQLLLIAGLTRERGLLHSSKWSAELAFSLPALPLAELQPPPPITEE-DAQDMDA 80
Query: 399 YTLAKCYFDCQEYDRAAHFLENCTSSKCVFLHKYSLYMSSEKKRLDNATD-LG--TENSE 569
YTLAK YFD +EYDRAAHFL C S K FL+ YS Y+S EKK+ D D LG +
Sbjct: 81 YTLAKAYFDVKEYDRAAHFLHGCNSKKAYFLYMYSRYLSGEKKKDDETVDSLGPLEKGQV 140
Query: 570 SNQVLLDLLSFF--KTNSNNLDGYLLYLEGVVLKKLDLRSQAVTVLQASVQAAPTLWAAW 743
N+ L +L K + LDG+ LYL GVVL+KLDL +A+ V + P W AW
Sbjct: 141 KNEALRELRVELSKKHQARELDGFGLYLYGVVLRKLDLVKEAIDVFVEATHVLPLHWGAW 200
Query: 744 IELAGL 761
+EL L
Sbjct: 201 LELCNL 206
>BC017713-1|AAH17713.1| 591|Homo sapiens CDC23 protein protein.
Length = 591
Score = 137 bits (332), Expect = 4e-32
Identities = 76/186 (40%), Positives = 105/186 (56%), Gaps = 5/186 (2%)
Frame = +3
Query: 219 DLTQVRIDILQGIRECNSRGLVQTTKWLAELNYALRDHKITSEEPSESLNEDITPEEKDA 398
DL +++ +L RGL+ ++KW AEL ++L + +P + E+ ++ DA
Sbjct: 22 DLREIKKQLLLIAGLTRERGLLHSSKWSAELAFSLPALPLAELQPPPPITEE-DAQDMDA 80
Query: 399 YTLAKCYFDCQEYDRAAHFLENCTSSKCVFLHKYSLYMSSEKKRLDNATD-LG--TENSE 569
YTLAK YFD +EYDRAAHFL C S K FL+ YS Y+S EKK+ D D LG +
Sbjct: 81 YTLAKAYFDVKEYDRAAHFLHGCNSKKAYFLYMYSRYLSGEKKKDDETVDSLGPLEKGQV 140
Query: 570 SNQVLLDLLSFF--KTNSNNLDGYLLYLEGVVLKKLDLRSQAVTVLQASVQAAPTLWAAW 743
N+ L +L K + LDG+ LYL GVVL+KLDL +A+ V + P W AW
Sbjct: 141 KNEALRELRVELSKKHQARELDGFGLYLYGVVLRKLDLVKEAIDVFVEATHVLPLHWGAW 200
Query: 744 IELAGL 761
+EL L
Sbjct: 201 LELCNL 206
>AY603103-1|AAS99353.1| 591|Homo sapiens CDC23 (cell division cycle
23, yeast, homolog) protein.
Length = 591
Score = 137 bits (332), Expect = 4e-32
Identities = 76/186 (40%), Positives = 105/186 (56%), Gaps = 5/186 (2%)
Frame = +3
Query: 219 DLTQVRIDILQGIRECNSRGLVQTTKWLAELNYALRDHKITSEEPSESLNEDITPEEKDA 398
DL +++ +L RGL+ ++KW AEL ++L + +P + E+ ++ DA
Sbjct: 22 DLREIKKQLLLIAGLTRERGLLHSSKWSAELAFSLPALPLAELQPPPPITEE-DAQDMDA 80
Query: 399 YTLAKCYFDCQEYDRAAHFLENCTSSKCVFLHKYSLYMSSEKKRLDNATD-LG--TENSE 569
YTLAK YFD +EYDRAAHFL C S K FL+ YS Y+S EKK+ D D LG +
Sbjct: 81 YTLAKAYFDVKEYDRAAHFLHGCNSKKAYFLYMYSRYLSGEKKKDDETVDSLGPLEKGQV 140
Query: 570 SNQVLLDLLSFF--KTNSNNLDGYLLYLEGVVLKKLDLRSQAVTVLQASVQAAPTLWAAW 743
N+ L +L K + LDG+ LYL GVVL+KLDL +A+ V + P W AW
Sbjct: 141 KNEALRELRVELSKKHQARELDGFGLYLYGVVLRKLDLVKEAIDVFVEATHVLPLHWGAW 200
Query: 744 IELAGL 761
+EL L
Sbjct: 201 LELCNL 206
>AF191341-1|AAF05755.1| 591|Homo sapiens anaphase-promoting complex
subunit 8 protein.
Length = 591
Score = 137 bits (332), Expect = 4e-32
Identities = 76/186 (40%), Positives = 105/186 (56%), Gaps = 5/186 (2%)
Frame = +3
Query: 219 DLTQVRIDILQGIRECNSRGLVQTTKWLAELNYALRDHKITSEEPSESLNEDITPEEKDA 398
DL +++ +L RGL+ ++KW AEL ++L + +P + E+ ++ DA
Sbjct: 22 DLREIKKQLLLIAGLTRERGLLHSSKWSAELAFSLPALPLAELQPPPPITEE-DAQDMDA 80
Query: 399 YTLAKCYFDCQEYDRAAHFLENCTSSKCVFLHKYSLYMSSEKKRLDNATD-LG--TENSE 569
YTLAK YFD +EYDRAAHFL C S K FL+ YS Y+S EKK+ D D LG +
Sbjct: 81 YTLAKAYFDVKEYDRAAHFLHGCNSKKAYFLYMYSRYLSGEKKKDDETVDSLGPLEKGQV 140
Query: 570 SNQVLLDLLSFF--KTNSNNLDGYLLYLEGVVLKKLDLRSQAVTVLQASVQAAPTLWAAW 743
N+ L +L K + LDG+ LYL GVVL+KLDL +A+ V + P W AW
Sbjct: 141 KNEALRELRVELSKKHQARELDGFGLYLYGVVLRKLDLVKEAIDVFVEATHVLPLHWGAW 200
Query: 744 IELAGL 761
+EL L
Sbjct: 201 LELCNL 206
>AF053977-1|AAC70920.1| 591|Homo sapiens cell division cycle
protein 23 protein.
Length = 591
Score = 137 bits (332), Expect = 4e-32
Identities = 76/186 (40%), Positives = 105/186 (56%), Gaps = 5/186 (2%)
Frame = +3
Query: 219 DLTQVRIDILQGIRECNSRGLVQTTKWLAELNYALRDHKITSEEPSESLNEDITPEEKDA 398
DL +++ +L RGL+ ++KW AEL ++L + +P + E+ ++ DA
Sbjct: 22 DLREIKKQLLLIAGLTRERGLLHSSKWSAELAFSLPALPLAELQPPPPITEE-DAQDMDA 80
Query: 399 YTLAKCYFDCQEYDRAAHFLENCTSSKCVFLHKYSLYMSSEKKRLDNATD-LG--TENSE 569
YTLAK YFD +EYDRAAHFL C S K FL+ YS Y+S EKK+ D D LG +
Sbjct: 81 YTLAKAYFDVKEYDRAAHFLHGCNSKKAYFLYMYSRYLSGEKKKDDETVDSLGPLEKGQV 140
Query: 570 SNQVLLDLLSFF--KTNSNNLDGYLLYLEGVVLKKLDLRSQAVTVLQASVQAAPTLWAAW 743
N+ L +L K + LDG+ LYL GVVL+KLDL +A+ V + P W AW
Sbjct: 141 KNEALRELRVELSKKHQARELDGFGLYLYGVVLRKLDLVKEAIDVFVEATHVLPLHWGAW 200
Query: 744 IELAGL 761
+EL L
Sbjct: 201 LELCNL 206
>AB011472-1|BAA75628.1| 591|Homo sapiens CDC23 protein.
Length = 591
Score = 137 bits (332), Expect = 4e-32
Identities = 76/186 (40%), Positives = 105/186 (56%), Gaps = 5/186 (2%)
Frame = +3
Query: 219 DLTQVRIDILQGIRECNSRGLVQTTKWLAELNYALRDHKITSEEPSESLNEDITPEEKDA 398
DL +++ +L RGL+ ++KW AEL ++L + +P + E+ ++ DA
Sbjct: 22 DLREIKKQLLLIAGLTRERGLLHSSKWSAELAFSLPALPLAELQPPPPITEE-DAQDMDA 80
Query: 399 YTLAKCYFDCQEYDRAAHFLENCTSSKCVFLHKYSLYMSSEKKRLDNATD-LG--TENSE 569
YTLAK YFD +EYDRAAHFL C S K FL+ YS Y+S EKK+ D D LG +
Sbjct: 81 YTLAKAYFDVKEYDRAAHFLHGCNSKKAYFLYMYSRYLSGEKKKDDETVDSLGPLEKGQV 140
Query: 570 SNQVLLDLLSFF--KTNSNNLDGYLLYLEGVVLKKLDLRSQAVTVLQASVQAAPTLWAAW 743
N+ L +L K + LDG+ LYL GVVL+KLDL +A+ V + P W AW
Sbjct: 141 KNEALRELRVELSKKHQARELDGFGLYLYGVVLRKLDLVKEAIDVFVEATHVLPLHWGAW 200
Query: 744 IELAGL 761
+EL L
Sbjct: 201 LELCNL 206
>AK223250-1|BAD96970.1| 591|Homo sapiens cell division cycle
protein 23 variant protein.
Length = 591
Score = 135 bits (327), Expect = 1e-31
Identities = 76/186 (40%), Positives = 104/186 (55%), Gaps = 5/186 (2%)
Frame = +3
Query: 219 DLTQVRIDILQGIRECNSRGLVQTTKWLAELNYALRDHKITSEEPSESLNEDITPEEKDA 398
DL +++ +L RGL+ ++KW AEL ++L + +P + E+ +E DA
Sbjct: 22 DLREIKKQLLLIAGLTRERGLLHSSKWSAELAFSLPALPLAELQPPPPITEE-DAQEMDA 80
Query: 399 YTLAKCYFDCQEYDRAAHFLENCTSSKCVFLHKYSLYMSSEKKRLDNATD-LG--TENSE 569
YTLAK YFD +EYDRAAH L C S K FL+ YS Y+S EKK+ D D LG +
Sbjct: 81 YTLAKAYFDVKEYDRAAHSLHGCNSKKAYFLYMYSRYLSGEKKKDDETVDSLGPLEKGQV 140
Query: 570 SNQVLLDLLSFF--KTNSNNLDGYLLYLEGVVLKKLDLRSQAVTVLQASVQAAPTLWAAW 743
N+ L +L K + LDG+ LYL GVVL+KLDL +A+ V + P W AW
Sbjct: 141 KNEALRELRVELSKKHQARELDGFGLYLYGVVLRKLDLVKEAIDVFVEATHVLPLHWGAW 200
Query: 744 IELAGL 761
+EL L
Sbjct: 201 LELCNL 206
>BC010944-1|AAH10944.1| 145|Homo sapiens CDC23 protein protein.
Length = 145
Score = 85.4 bits (202), Expect = 2e-16
Identities = 41/98 (41%), Positives = 59/98 (60%)
Frame = +3
Query: 219 DLTQVRIDILQGIRECNSRGLVQTTKWLAELNYALRDHKITSEEPSESLNEDITPEEKDA 398
DL +++ +L RGL+ ++KW AEL ++L + +P + E+ ++ DA
Sbjct: 22 DLREIKKQLLLIAGLTRERGLLHSSKWSAELAFSLPALPLAELQPPPPITEE-DAQDMDA 80
Query: 399 YTLAKCYFDCQEYDRAAHFLENCTSSKCVFLHKYSLYM 512
YTLAK YFD +EYDRAAHFL C S K FL+ YS Y+
Sbjct: 81 YTLAKAYFDVKEYDRAAHFLHGCNSKKAYFLYMYSRYL 118
>BC005258-1|AAH05258.1| 145|Homo sapiens CDC23 protein protein.
Length = 145
Score = 85.4 bits (202), Expect = 2e-16
Identities = 41/98 (41%), Positives = 59/98 (60%)
Frame = +3
Query: 219 DLTQVRIDILQGIRECNSRGLVQTTKWLAELNYALRDHKITSEEPSESLNEDITPEEKDA 398
DL +++ +L RGL+ ++KW AEL ++L + +P + E+ ++ DA
Sbjct: 22 DLREIKKQLLLIAGLTRERGLLHSSKWSAELAFSLPALPLAELQPPPPITEE-DAQDMDA 80
Query: 399 YTLAKCYFDCQEYDRAAHFLENCTSSKCVFLHKYSLYM 512
YTLAK YFD +EYDRAAHFL C S K FL+ YS Y+
Sbjct: 81 YTLAKAYFDVKEYDRAAHFLHGCNSKKAYFLYMYSRYL 118
>AL133654-1|CAB63770.1| 833|Homo sapiens hypothetical protein
protein.
Length = 833
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +3
Query: 201 KSDIQIDLTQVRIDILQGIRECNSRGLVQTTKWLAELNYALRDHKITSEEPSESLNEDIT 380
KSD++ + ++ID LQ +E N + L + + L E +RD ++TS E L +++
Sbjct: 120 KSDLENE--DLKIDCLQESQELNLQKLKNSERILTEAKQKMRDLQLTS-RMKEDLIKELI 176
Query: 381 PEEKDAYTLAKCY 419
DA +++K Y
Sbjct: 177 KTGNDAKSVSKQY 189
>BC033898-1|AAH33898.1| 468|Homo sapiens transmembrane protein 151
protein.
Length = 468
Score = 31.5 bits (68), Expect = 3.5
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Frame = +3
Query: 393 DAYTLAKCYFDCQ-------EYDRAAHFLENCTSSKCVFLHKYSLYMSSEKKRLDNATDL 551
DAYT + Y + E+D +AH + + S + V L +++ + + R
Sbjct: 172 DAYTTTQVYHERADSRTARGEFDYSAHGVRD-VSKELVGLAEHA----ATRLRFTKCFSF 226
Query: 552 GTENSESNQVLLDLLSFFKTNSNNLDGYLLYLEGVVLKKLDLRSQAVTVLQASVQAAPTL 731
G+ +E++ L FF N LD YL EG+ LK +D R + A ++ P
Sbjct: 227 GSAEAEASY-LTQRARFFSANEG-LDDYLEAREGMHLKDVDFRESLMVF--ADPRSPPWY 282
Query: 732 WAAWI 746
AW+
Sbjct: 283 ARAWV 287
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,368,386
Number of Sequences: 237096
Number of extensions: 2020680
Number of successful extensions: 3886
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3870
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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