Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3d01
(775 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 27 0.19
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 27 0.19
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 0.78
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 25 0.78
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 1.0
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 24 1.8
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 2.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 9.6
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 21 9.6
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 9.6
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 27.1 bits (57), Expect = 0.19
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 216 IDLTQVRIDILQGIRECNSRGLV 284
++ Q+ +D+L+GIR +S+GLV
Sbjct: 697 LERIQIALDVLEGIRYLHSQGLV 719
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 27.1 bits (57), Expect = 0.19
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 216 IDLTQVRIDILQGIRECNSRGLV 284
++ Q+ +D+L+GIR +S+GLV
Sbjct: 735 LERIQIALDVLEGIRYLHSQGLV 757
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.0 bits (52), Expect = 0.78
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 588 DLLSFFKTNSNNLDGYLLYLEGVVLKKLDLRSQ 686
++L+F K+ N +GY + G LD+R++
Sbjct: 401 EILNFRKSEHNGTNGYQYQVVGKWFNSLDIRTE 433
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.0 bits (52), Expect = 0.78
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 588 DLLSFFKTNSNNLDGYLLYLEGVVLKKLDLRSQ 686
++L+F K+ N +GY + G LD+R++
Sbjct: 491 EILNFRKSEHNGTNGYQYQVVGKWFNSLDIRTE 523
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 648 EGVVLKKLDLRSQAVTVLQASVQA 719
E VV+K LDLRSQ LQ S+ +
Sbjct: 279 EFVVVKVLDLRSQLEYDLQTSIMS 302
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 273 RGLVQTTKWLAELNYALRD 329
RG+ ++LAE+NY RD
Sbjct: 742 RGIASGMQYLAEMNYVHRD 760
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +1
Query: 553 VQKIVNQIKFFWTYCLSLKPTPITSMVT 636
++ + N + W Y KPTP+ ++ T
Sbjct: 122 LENVNNAARINWEYLDKYKPTPLGAVAT 149
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -1
Query: 313 FNSASHFVVCTRPRLLHSRIP*RISILTWVRSI*MSDLGCI 191
F AS V+ + H R P R + +W++ + + L C+
Sbjct: 266 FMVASSVVLTVLVLIFHHRTPDRYVMPSWIKMLFLQWLPCL 306
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -1
Query: 313 FNSASHFVVCTRPRLLHSRIP*RISILTWVRSI*MSDLGCI 191
F AS V+ + H R P R + +W++ + + L C+
Sbjct: 266 FMVASSVVLTVLVLIFHHRTPDRYVMPSWIKMLFLQWLPCL 306
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -1
Query: 313 FNSASHFVVCTRPRLLHSRIP*RISILTWVRSI*MSDLGCI 191
F AS V+ + H R P R + +W++ + + L C+
Sbjct: 266 FMVASSVVLTVLVLIFHHRTPDRYVMPSWIKMLFLQWLPCL 306
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -1
Query: 313 FNSASHFVVCTRPRLLHSRIP*RISILTWVRSI*MSDLGCI 191
F AS V+ + H R P R + +W++ + + L C+
Sbjct: 266 FMVASSVVLTVLVLIFHHRTPDRYVMPSWIKMLFLQWLPCL 306
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -1
Query: 313 FNSASHFVVCTRPRLLHSRIP*RISILTWVRSI*MSDLGCI 191
F AS V+ + H R P R + +W++ + + L C+
Sbjct: 266 FMVASSVVLTVLVLIFHHRTPDRYVMPSWIKMLFLQWLPCL 306
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -1
Query: 313 FNSASHFVVCTRPRLLHSRIP*RISILTWVRSI*MSDLGCI 191
F AS V+ + H R P R + +W++ + + L C+
Sbjct: 266 FMVASSVVLTVLVLIFHHRTPDRYVMPSWIKMLFLQWLPCL 306
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = +2
Query: 2 SYICSLSYFSLIPTVFIYVLIMD 70
SY+ ++ F + TVF+++ +M+
Sbjct: 302 SYLKAVDAFMSVCTVFVFMALME 324
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1
Query: 568 SLFSVPRSVALSKRFFSLDIYKEYL*RKTHFE 473
S S S +L K++ S D++ + +KT F+
Sbjct: 15 SKLSSSDSKSLLKKYLSKDVFDQLKTKKTSFD 46
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 600 KTISPKELDLIHYFLY 553
K ISP++ +LIH +Y
Sbjct: 329 KPISPEQEELIHRLVY 344
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,036
Number of Sequences: 438
Number of extensions: 4298
Number of successful extensions: 25
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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