BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3c19
(760 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VJ25 Cluster: CG15168-PA; n=8; Endopterygota|Rep: CG1... 122 1e-26
UniRef50_Q09JH7 Cluster: Transmembrane protein; n=2; Arthropoda|... 107 2e-22
UniRef50_Q8N4V1 Cluster: Transmembrane protein 32 precursor; n=9... 99 1e-19
UniRef50_Q8K273 Cluster: Transmembrane protein 32 precursor; n=1... 99 1e-19
UniRef50_A7RYN2 Cluster: Predicted protein; n=1; Nematostella ve... 98 2e-19
UniRef50_Q555V5 Cluster: Putative uncharacterized protein; n=2; ... 86 8e-16
UniRef50_Q17477 Cluster: Putative uncharacterized protein; n=2; ... 66 7e-10
UniRef50_Q2HIM5 Cluster: At5g03345; n=7; Magnoliophyta|Rep: At5g... 61 3e-08
UniRef50_Q5KIM9 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_Q0UMW7 Cluster: Predicted protein; n=1; Phaeosphaeria n... 38 0.36
UniRef50_Q64R63 Cluster: Putative uncharacterized protein; n=2; ... 36 0.82
UniRef50_Q23R21 Cluster: Putative uncharacterized protein; n=1; ... 36 0.82
UniRef50_A5DF56 Cluster: Putative uncharacterized protein; n=1; ... 36 0.82
UniRef50_A3LV70 Cluster: Predicted protein; n=3; Saccharomycetal... 36 1.4
UniRef50_Q6PV99 Cluster: Gonadotropin I beta subunit; n=3; Acipe... 35 2.5
UniRef50_A0CKB5 Cluster: Chromosome undetermined scaffold_2, who... 34 3.3
>UniRef50_Q9VJ25 Cluster: CG15168-PA; n=8; Endopterygota|Rep:
CG15168-PA - Drosophila melanogaster (Fruit fly)
Length = 109
Score = 122 bits (294), Expect = 1e-26
Identities = 51/102 (50%), Positives = 73/102 (71%)
Frame = +3
Query: 162 FHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVA 341
F+K+++I GF SL H AFSA HR+YLR+T QE+ +LPLDI++Q V+SL V++ ++ +
Sbjct: 6 FNKLLLIAGFASLAHAAFSAAHHRTYLRLTEQEWNSLPLDIILQTVISLVIVIYNIIEIV 65
Query: 342 GNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKALSYDYVP 467
GN +EI A ++ W+T N PSFY FNHRG+AL+ Y P
Sbjct: 66 GNFKEIRATVDMQQKTWDTLGNFPSFYSFNHRGRALNPGYTP 107
>UniRef50_Q09JH7 Cluster: Transmembrane protein; n=2;
Arthropoda|Rep: Transmembrane protein - Argas
monolakensis
Length = 103
Score = 107 bits (258), Expect = 2e-22
Identities = 48/95 (50%), Positives = 67/95 (70%)
Frame = +3
Query: 168 KVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVAGN 347
K++V +G + L H A SA QHRSYLR+T Q+FT LPLD+++Q+V L M+GV+ +AG+
Sbjct: 7 KLMVTLGVVGLIHAAISAAQHRSYLRLTEQDFTILPLDVILQSVFCLLLTMYGVVCIAGD 66
Query: 348 LREIPAAAELNAIKWETQNNLPSFYIFNHRGKALS 452
+E+ A EL +ET N PSFY F HRG+AL+
Sbjct: 67 FKEVRATVELETKTFETFGNRPSFYTFCHRGRALA 101
>UniRef50_Q8N4V1 Cluster: Transmembrane protein 32 precursor; n=9;
Amniota|Rep: Transmembrane protein 32 precursor - Homo
sapiens (Human)
Length = 131
Score = 99.1 bits (236), Expect = 1e-19
Identities = 43/97 (44%), Positives = 67/97 (69%)
Frame = +3
Query: 159 SFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNV 338
S K +V IG +L H AFSA QHRSY+R+T +E +LP+DIV+Q +++ +G++++
Sbjct: 4 SLWKGLVGIGLFALAHAAFSAAQHRSYMRLTEKEDESLPIDIVLQTLLAFAVTCYGIVHI 63
Query: 339 AGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 449
AG +++ A +EL ++T N PSFY+FNHRG+ L
Sbjct: 64 AGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVL 100
>UniRef50_Q8K273 Cluster: Transmembrane protein 32 precursor; n=17;
Euteleostomi|Rep: Transmembrane protein 32 precursor -
Mus musculus (Mouse)
Length = 131
Score = 98.7 bits (235), Expect = 1e-19
Identities = 42/97 (43%), Positives = 67/97 (69%)
Frame = +3
Query: 159 SFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNV 338
S K +V +G +L H AFSA QHRSY+R+T +E +LP+DIV+Q +++ +G++++
Sbjct: 4 SLWKGLVGVGLFALAHAAFSAAQHRSYMRLTEKEDESLPIDIVLQTLLAFAVTCYGIVHI 63
Query: 339 AGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 449
AG +++ A +EL ++T N PSFY+FNHRG+ L
Sbjct: 64 AGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVL 100
>UniRef50_A7RYN2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 109
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/94 (46%), Positives = 63/94 (67%)
Frame = +3
Query: 168 KVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVAGN 347
+V+V G L++ H +SA Q R+Y ++ +EF +LPLDI IQ V+ + GV+ VAG
Sbjct: 6 RVLVFFGVLAILHAGYSAVQCRTYYKLLEEEFVSLPLDIYIQCVLGMLLGCVGVVLVAGE 65
Query: 348 LREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 449
+EI AAAE+ + WE+ N PSFY FNHRG+A+
Sbjct: 66 FKEIKAAAEMASKTWESLGNRPSFYTFNHRGRAM 99
>UniRef50_Q555V5 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 105
Score = 86.2 bits (204), Expect = 8e-16
Identities = 39/95 (41%), Positives = 59/95 (62%)
Frame = +3
Query: 168 KVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVAGN 347
K+ +IG HT +SA QHR YLR+T Q F +P DIV++ ++SLF WG++N +
Sbjct: 7 KIFCVIGISIFLHTVYSALQHRKYLRLTDQPFEGVPFDIVVECIISLFLFAWGIIN-SQF 65
Query: 348 LREIPAAAELNAIKWETQNNLPSFYIFNHRGKALS 452
L I A+ L +++ + P+F +FNHRGK L+
Sbjct: 66 LIPIKASTHLAKKSFDSYDYRPNFTVFNHRGKYLN 100
>UniRef50_Q17477 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 500
Score = 66.5 bits (155), Expect = 7e-10
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = +3
Query: 156 ASFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWG 326
++ +++I I+ LSL H A+SA QHR YLR+T Q F LP D+V Q V+SL A+++G
Sbjct: 3 STIYRLITIVSLLSLLHCAYSAAQHRFYLRLTEQPFINLPSDVVAQTVISLIALIYG 59
>UniRef50_Q2HIM5 Cluster: At5g03345; n=7; Magnoliophyta|Rep:
At5g03345 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/91 (30%), Positives = 49/91 (53%)
Frame = +3
Query: 171 VIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVAGNL 350
++ + G L L H A+S Q+R L+I +EF+ P++++++ ++ L MW L G
Sbjct: 6 LVGVFGVLILSHAAYSTIQYRGLLKIMEEEFSRPPINVILELIIGLALCMWAALTFPGKF 65
Query: 351 REIPAAAELNAIKWETQNNLPSFYIFNHRGK 443
I ++ N + N+ F IFNHRG+
Sbjct: 66 LSIHPDSDENRAVFLPDNS--DFMIFNHRGR 94
>UniRef50_Q5KIM9 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 154
Score = 59.3 bits (137), Expect = 1e-07
Identities = 33/97 (34%), Positives = 53/97 (54%)
Frame = +3
Query: 168 KVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVAGN 347
+++V + L+LFH AFS +H S L+ S+ + LPL IVI+A VSL + G++ G
Sbjct: 55 RLLVGLACLALFHAAFSTYEHLSILKALSRPTSGLPLSIVIEAFVSLICFIIGIVYATGE 114
Query: 348 LREIPAAAELNAIKWETQNNLPSFYIFNHRGKALSYD 458
L+++ EL + + F + RGKA+ D
Sbjct: 115 LKDVTYRGELAHRTIDDSDARMGFMKLSKRGKAIFGD 151
>UniRef50_Q0UMW7 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 142
Score = 37.5 bits (83), Expect = 0.36
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +3
Query: 153 MASFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVL 332
MA V+ +G L L H +SA +H S T LP DI ++ ++S+F + G++
Sbjct: 1 MAILGTVLNTVGALFLTHAVYSAHEHTSAFSATP-----LPTDITLELLLSIFLLSTGIV 55
Query: 333 NVAGNLREIPAAAELNAIKWETQ 401
A LR I A I E Q
Sbjct: 56 ISAQPLRPIQNAKWAGQISREGQ 78
>UniRef50_Q64R63 Cluster: Putative uncharacterized protein; n=2;
Bacteroides fragilis|Rep: Putative uncharacterized
protein - Bacteroides fragilis
Length = 169
Score = 36.3 bits (80), Expect = 0.82
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -1
Query: 412 GRLFCVSHLIAFNSAAAGISRRLPA---TFNTPHMTANKLTTAWMTISNGNVVNSCDVIL 242
G+L C + A N AA+GI + +++T K T AW N S VI
Sbjct: 41 GKLVC-REIYAMNDAASGILNPVKMYKYSYDTDQQKTVKSTYAWNIFKNTWETESRTVIS 99
Query: 241 KYDRCCVAEKAVWNNER 191
+Y+ E +VWN E+
Sbjct: 100 RYETETSVEYSVWNKEK 116
>UniRef50_Q23R21 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 111
Score = 36.3 bits (80), Expect = 0.82
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +3
Query: 153 MASFHKVIVIIGFLSLFHTAFSATQHRSYLRIT--SQEFTTLPLDIVIQAVVSLFAVMWG 326
M +F KVI GFL L H +S ++R YL + EF ++PLDI+ + V L ++
Sbjct: 1 MINFFKVI---GFLFLIHAGYSLMKYRKYLTFNDRADEF-SIPLDILAEIVFGLVLNLFF 56
Query: 327 VLNVAGNLREI 359
+ + G ++I
Sbjct: 57 GILLDGKFQDI 67
>UniRef50_A5DF56 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 122
Score = 36.3 bits (80), Expect = 0.82
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 180 IIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVAGN 347
IIG L L H +S+ + L+I+ ++PLDI+++ + L ++ G + N
Sbjct: 4 IIGALLLLHATYSSFELHQVLKISHLNSASVPLDIIVEVGIGLVLILAGAIKSIEN 59
>UniRef50_A3LV70 Cluster: Predicted protein; n=3;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 131
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 171 VIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVAGNL 350
V +G L L H+ +S+ + L + S +LP+DIV +AVV + ++ G ++ NL
Sbjct: 6 VFYFVGVLLLVHSGYSSFEFHK-LTVLSHYSGSLPVDIVAEAVVGILIIVIGSISSIKNL 64
>UniRef50_Q6PV99 Cluster: Gonadotropin I beta subunit; n=3;
Acipenser|Rep: Gonadotropin I beta subunit - Acipenser
schrenckii (Amur sturgeon)
Length = 128
Score = 34.7 bits (76), Expect = 2.5
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 278 GYCHPSCG-QFVCCHVGSVECGG*SSRNTSCC*IKCYQMGDTEQSSLILYLQ 430
G CH SC + + + CG S NT+ C +C D +SS+ LY Q
Sbjct: 16 GQCHASCALENITIGIEKDGCGNCVSVNTTSCAGRCLTQADVYKSSISLYTQ 67
>UniRef50_A0CKB5 Cluster: Chromosome undetermined scaffold_2, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_2,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 34.3 bits (75), Expect = 3.3
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = +3
Query: 171 VIVIIGFLSLFHTAFSATQHRSYL--RITSQEFTTLPLDIVIQAVVSL-FAVMWGVL--N 335
++ +IGFL L H+A S ++R +L T+ ++ +PLDI+++ +V + +GV+
Sbjct: 1 MLKVIGFLLLLHSAISLIRYRKHLIYNDTTDQY-HIPLDILLEIIVGFALNMFFGVIMDK 59
Query: 336 VAGNLREIP 362
N+ E P
Sbjct: 60 KFANIHEFP 68
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,030,625
Number of Sequences: 1657284
Number of extensions: 12109831
Number of successful extensions: 26355
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 25322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26326
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -