Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3c18
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   5.3  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   7.0  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    23   9.2  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 670  ILINDSYIIHSNENTFIY 617
            +L NDSY  H   + FIY
Sbjct: 1595 VLANDSYGCHDRAHVFIY 1612


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 480 LGYHFANGIRHLYWDTAKGLSIK 548
           +G   ANG+ HL+ +  KG  +K
Sbjct: 344 MGKSIANGLAHLHTEIRKGELVK 366


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 2   NVKCTRFVVRLSEDYD 49
           N+K T+FVVRL E YD
Sbjct: 247 NLKLTQFVVRLGE-YD 261


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,557
Number of Sequences: 2352
Number of extensions: 13062
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)