Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3c17
         (261 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   3.2  
AY752904-1|AAV30078.1|   84|Anopheles gambiae peroxidase 10 prot...    21   7.3  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    21   7.3  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 168  QFAILQKLVFPKTKFPGAFTSSEAKYSLNNSWNSAK 61
            QFA +  ++       GA+  + A    NNSWN AK
Sbjct: 2686 QFAFIS-IIVAVLAVGGAYVGASAA---NNSWNPAK 2717


>AY752904-1|AAV30078.1|   84|Anopheles gambiae peroxidase 10
           protein.
          Length = 84

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 100 SEIFFEQFLEFSEGDR 53
           +E+  +QF +F  GDR
Sbjct: 39  AELIADQFAKFQRGDR 54


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 138 PKTKFPGAFTSSEAKYSLNNSWNSAKETDDLPL 40
           P+T+  G ++ +E    L N  N+A +  D PL
Sbjct: 327 PQTQTEGFYSWAEVCAMLPNPSNTALKGADAPL 359


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,375
Number of Sequences: 2352
Number of extensions: 3241
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 13983072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)