Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3c17
(261 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX538169-1|CAD98046.1| 914|Homo sapiens hypothetical protein pr... 29 2.7
BC117177-1|AAI17178.1| 914|Homo sapiens transmembrane and tetra... 29 2.7
BC117175-1|AAI17176.1| 914|Homo sapiens transmembrane and tetra... 29 2.7
AK074973-1|BAC11325.1| 815|Homo sapiens BUNIT (EC 2.4.1.-). pr... 29 2.7
AJ697717-1|CAG26973.1| 914|Homo sapiens SMILE protein protein. 29 2.7
BC065237-1|AAH65237.1| 812|Homo sapiens chromosome 13 open read... 28 6.2
AL845154-1|CAI23600.1| 812|Homo sapiens chromosome 13 open read... 28 6.2
AK074894-1|BAC11273.1| 740|Homo sapiens protein ( Homo sapiens ... 28 6.2
AB058705-1|BAB47431.1| 821|Homo sapiens KIAA1802 protein protein. 28 6.2
>BX538169-1|CAD98046.1| 914|Homo sapiens hypothetical protein
protein.
Length = 914
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 12 KLHQLFRSYPKASHLSPSLNSRNCSKNISLLRM*TPLETLSSGRPASEV*RTDCDLNYDL 191
+L + + Y +A + P S+ LL+M PL+ + A E+ R + DL Y+L
Sbjct: 544 RLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNL 603
Query: 192 CLEFVGL 212
+ + L
Sbjct: 604 AIVHIEL 610
>BC117177-1|AAI17178.1| 914|Homo sapiens transmembrane and
tetratricopeptide repeat containing 3 protein.
Length = 914
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 12 KLHQLFRSYPKASHLSPSLNSRNCSKNISLLRM*TPLETLSSGRPASEV*RTDCDLNYDL 191
+L + + Y +A + P S+ LL+M PL+ + A E+ R + DL Y+L
Sbjct: 544 RLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNL 603
Query: 192 CLEFVGL 212
+ + L
Sbjct: 604 AIVHIEL 610
>BC117175-1|AAI17176.1| 914|Homo sapiens transmembrane and
tetratricopeptide repeat containing 3 protein.
Length = 914
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 12 KLHQLFRSYPKASHLSPSLNSRNCSKNISLLRM*TPLETLSSGRPASEV*RTDCDLNYDL 191
+L + + Y +A + P S+ LL+M PL+ + A E+ R + DL Y+L
Sbjct: 544 RLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNL 603
Query: 192 CLEFVGL 212
+ + L
Sbjct: 604 AIVHIEL 610
>AK074973-1|BAC11325.1| 815|Homo sapiens BUNIT (EC 2.4.1.-).
protein.
Length = 815
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 12 KLHQLFRSYPKASHLSPSLNSRNCSKNISLLRM*TPLETLSSGRPASEV*RTDCDLNYDL 191
+L + + Y +A + P S+ LL+M PL+ + A E+ R + DL Y+L
Sbjct: 484 RLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNL 543
Query: 192 CLEFVGL 212
+ + L
Sbjct: 544 AIVHIEL 550
>AJ697717-1|CAG26973.1| 914|Homo sapiens SMILE protein protein.
Length = 914
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 12 KLHQLFRSYPKASHLSPSLNSRNCSKNISLLRM*TPLETLSSGRPASEV*RTDCDLNYDL 191
+L + + Y +A + P S+ LL+M PL+ + A E+ R + DL Y+L
Sbjct: 544 RLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNL 603
Query: 192 CLEFVGL 212
+ + L
Sbjct: 604 AIVHIEL 610
>BC065237-1|AAH65237.1| 812|Homo sapiens chromosome 13 open reading
frame 8 protein.
Length = 812
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 153 QKLVFPKTKFPGAFTSSEAKYSLNNSWNSAKETDDLP 43
QK VFP+T+ PG SE+ + ++ W D P
Sbjct: 489 QKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEP 525
>AL845154-1|CAI23600.1| 812|Homo sapiens chromosome 13 open reading
frame 8 protein.
Length = 812
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 153 QKLVFPKTKFPGAFTSSEAKYSLNNSWNSAKETDDLP 43
QK VFP+T+ PG SE+ + ++ W D P
Sbjct: 489 QKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEP 525
>AK074894-1|BAC11273.1| 740|Homo sapiens protein ( Homo sapiens
cDNA FLJ90413 fis, clone NT2RP3000063, weakly similar to
NEUROFILAMENT TRIPLET H PROTEIN. ).
Length = 740
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 153 QKLVFPKTKFPGAFTSSEAKYSLNNSWNSAKETDDLP 43
QK VFP+T+ PG SE+ + ++ W D P
Sbjct: 417 QKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEP 453
>AB058705-1|BAB47431.1| 821|Homo sapiens KIAA1802 protein protein.
Length = 821
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 153 QKLVFPKTKFPGAFTSSEAKYSLNNSWNSAKETDDLP 43
QK VFP+T+ PG SE+ + ++ W D P
Sbjct: 498 QKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEP 534
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,035,766
Number of Sequences: 237096
Number of extensions: 417988
Number of successful extensions: 843
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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