Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3c13
         (781 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015848-1|AAH15848.1|  298|Homo sapiens glyoxalase domain conta...   189   1e-47
BC008605-1|AAH08605.1|  298|Homo sapiens glyoxalase domain conta...   189   1e-47
AK001488-1|BAA91719.1|  188|Homo sapiens protein ( Homo sapiens ...   189   1e-47
AF177343-1|AAG17987.1|  298|Homo sapiens unknown protein.             189   1e-47
AF061730-1|AAG43141.1|  298|Homo sapiens My027 protein protein.       189   1e-47
AF151908-1|AAD34145.1|  504|Homo sapiens CGI-150 protein protein.     184   4e-46
AF177342-1|AAG17986.1|  313|Homo sapiens unknown protein.             141   3e-33
U63630-2|AAC52019.2| 1689|Homo sapiens DNA-PKcs protein.               30   8.1  
U47077-1|AAB39925.5| 4128|Homo sapiens DNA-dependent protein kin...    30   8.1  
U34994-1|AAC50210.3| 4097|Homo sapiens DNA dependent protein kin...    30   8.1  
AY316117-1|AAP69525.1| 4128|Homo sapiens protein kinase, DNA-act...    30   8.1  

>BC015848-1|AAH15848.1|  298|Homo sapiens glyoxalase domain
           containing 4 protein.
          Length = 298

 Score =  189 bits (460), Expect = 1e-47
 Identities = 83/127 (65%), Positives = 101/127 (79%), Gaps = 1/127 (0%)
 Frame = +3

Query: 165 MVSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGY 344
           M + RALHFVFKV +R  TA+FYR++LGMKVLRHEEF EGC+AACNGPY  +WSKTMVG+
Sbjct: 1   MAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGF 60

Query: 345 GPEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKE-HNGLKYVEAP 521
           GPED HFV ELTYNYGV  Y+ GNDF+GIT+ SS+++  A+   WP+ E   G+   EAP
Sbjct: 61  GPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAVSNARKLEWPLTEVAEGVFETEAP 120

Query: 522 GGYKFYI 542
           GGYKFY+
Sbjct: 121 GGYKFYL 127



 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
 Frame = +2

Query: 587 SLASSNLAKSIAYWNGLLTLKLYEKTDKT--ALLGYSDDQAKLELVDIGEPINRAKAYGR 760
           +LA S+L KS+ YW  LL +K+YEK ++   ALLGY+D+Q KLEL  +   ++ A A+GR
Sbjct: 142 TLAVSDLQKSLNYWCNLLGMKIYEKDEEKQRALLGYADNQCKLELQGVKGGVDHAAAFGR 201

Query: 761 IAFSCP 778
           IAFSCP
Sbjct: 202 IAFSCP 207


>BC008605-1|AAH08605.1|  298|Homo sapiens glyoxalase domain
           containing 4 protein.
          Length = 298

 Score =  189 bits (460), Expect = 1e-47
 Identities = 83/127 (65%), Positives = 101/127 (79%), Gaps = 1/127 (0%)
 Frame = +3

Query: 165 MVSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGY 344
           M + RALHFVFKV +R  TA+FYR++LGMKVLRHEEF EGC+AACNGPY  +WSKTMVG+
Sbjct: 1   MAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGF 60

Query: 345 GPEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKE-HNGLKYVEAP 521
           GPED HFV ELTYNYGV  Y+ GNDF+GIT+ SS+++  A+   WP+ E   G+   EAP
Sbjct: 61  GPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAVSNARKLEWPLTEVAEGVFETEAP 120

Query: 522 GGYKFYI 542
           GGYKFY+
Sbjct: 121 GGYKFYL 127



 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
 Frame = +2

Query: 587 SLASSNLAKSIAYWNGLLTLKLYEKTDKT--ALLGYSDDQAKLELVDIGEPINRAKAYGR 760
           +LA S+L KS+ YW  LL +K+YEK ++   ALLGY+D+Q KLEL  +   ++ A A+GR
Sbjct: 142 TLAVSDLQKSLNYWCNLLGMKIYEKDEEKQRALLGYADNQCKLELQGVKGGVDHAAAFGR 201

Query: 761 IAFSCP 778
           IAFSCP
Sbjct: 202 IAFSCP 207


>AK001488-1|BAA91719.1|  188|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10626 fis, clone NT2RP2005549, weakly similar to
           PUTATIVE LACTOYLGLUTATHIONE LYASE (EC 4.4.1.5). ).
          Length = 188

 Score =  189 bits (460), Expect = 1e-47
 Identities = 83/127 (65%), Positives = 101/127 (79%), Gaps = 1/127 (0%)
 Frame = +3

Query: 165 MVSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGY 344
           M + RALHFVFKV +R  TA+FYR++LGMKVLRHEEF EGC+AACNGPY  +WSKTMVG+
Sbjct: 1   MAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGF 60

Query: 345 GPEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKE-HNGLKYVEAP 521
           GPED HFV ELTYNYGV  Y+ GNDF+GIT+ SS+++  A+   WP+ E   G+   EAP
Sbjct: 61  GPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAVSNARKLEWPLTEVAEGVFETEAP 120

Query: 522 GGYKFYI 542
           GGYKFY+
Sbjct: 121 GGYKFYL 127



 Score = 43.2 bits (97), Expect = 0.001
 Identities = 21/40 (52%), Positives = 30/40 (75%), Gaps = 2/40 (5%)
 Frame = +2

Query: 587 SLASSNLAKSIAYWNGLLTLKLYEKTD--KTALLGYSDDQ 700
           +LA S+L KS+ YW  LL +K+YEK +  + ALLGY+D+Q
Sbjct: 142 TLAVSDLQKSLNYWCNLLGMKIYEKDEEKQRALLGYADNQ 181


>AF177343-1|AAG17987.1|  298|Homo sapiens unknown protein.
          Length = 298

 Score =  189 bits (460), Expect = 1e-47
 Identities = 83/127 (65%), Positives = 101/127 (79%), Gaps = 1/127 (0%)
 Frame = +3

Query: 165 MVSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGY 344
           M + RALHFVFKV +R  TA+FYR++LGMKVLRHEEF EGC+AACNGPY  +WSKTMVG+
Sbjct: 1   MAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGF 60

Query: 345 GPEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKE-HNGLKYVEAP 521
           GPED HFV ELTYNYGV  Y+ GNDF+GIT+ SS+++  A+   WP+ E   G+   EAP
Sbjct: 61  GPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAVSNARKLEWPLTEVAEGVFETEAP 120

Query: 522 GGYKFYI 542
           GGYKFY+
Sbjct: 121 GGYKFYL 127



 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
 Frame = +2

Query: 587 SLASSNLAKSIAYWNGLLTLKLYEKTDKT--ALLGYSDDQAKLELVDIGEPINRAKAYGR 760
           +LA S+L KS+ YW  LL +K+YEK ++   ALLGY+D+Q KLEL  +   ++ A A+GR
Sbjct: 142 TLAVSDLQKSLNYWCNLLGMKIYEKDEEKQRALLGYADNQCKLELQGVKGGVDHAAAFGR 201

Query: 761 IAFSCP 778
           IAFSCP
Sbjct: 202 IAFSCP 207


>AF061730-1|AAG43141.1|  298|Homo sapiens My027 protein protein.
          Length = 298

 Score =  189 bits (460), Expect = 1e-47
 Identities = 83/127 (65%), Positives = 101/127 (79%), Gaps = 1/127 (0%)
 Frame = +3

Query: 165 MVSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGY 344
           M + RALHFVFKV +R  TA+FYR++LGMKVLRHEEF EGC+AACNGPY  +WSKTMVG+
Sbjct: 1   MAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGF 60

Query: 345 GPEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKE-HNGLKYVEAP 521
           GPED HFV ELTYNYGV  Y+ GNDF+GIT+ SS+++  A+   WP+ E   G+   EAP
Sbjct: 61  GPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAVSNARKLEWPLTEVAEGVFETEAP 120

Query: 522 GGYKFYI 542
           GGYKFY+
Sbjct: 121 GGYKFYL 127



 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
 Frame = +2

Query: 587 SLASSNLAKSIAYWNGLLTLKLYEKTDKT--ALLGYSDDQAKLELVDIGEPINRAKAYGR 760
           +LA S+L KS+ YW  LL +K+YEK ++   ALLGY+D+Q KLEL  +   ++ A A+GR
Sbjct: 142 TLAVSDLQKSLNYWCNLLGMKIYEKDEEKQRALLGYADNQCKLELQGVKGGVDHAAAFGR 201

Query: 761 IAFSCP 778
           IAFSCP
Sbjct: 202 IAFSCP 207


>AF151908-1|AAD34145.1|  504|Homo sapiens CGI-150 protein protein.
          Length = 504

 Score =  184 bits (447), Expect = 4e-46
 Identities = 80/121 (66%), Positives = 97/121 (80%), Gaps = 1/121 (0%)
 Frame = +3

Query: 183 LHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYGPEDTH 362
           LHFVFKV +R  TA+FYR++LGMKVLRHEEF EGC+AACNGPY  +WSKTMVG+GPED H
Sbjct: 213 LHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDH 272

Query: 363 FVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKE-HNGLKYVEAPGGYKFY 539
           FV ELTYNYGV  Y+ GNDF+GIT+ SS+++  A+   WP+ E   G+   EAPGGYKFY
Sbjct: 273 FVAELTYNYGVGDYKLGNDFMGITLASSQAVSNARKLEWPLTEVAEGVFETEAPGGYKFY 332

Query: 540 I 542
           +
Sbjct: 333 L 333



 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
 Frame = +2

Query: 587 SLASSNLAKSIAYWNGLLTLKLYEKTDKT--ALLGYSDDQAKLELVDIGEPINRAKAYGR 760
           +LA S+L KS+ YW  LL +K+YEK ++   ALLGY+D+Q KLEL  +   ++ A A+GR
Sbjct: 348 TLAVSDLQKSLNYWCNLLGMKIYEKDEEKQRALLGYADNQCKLELQGVKGGVDHAAAFGR 407

Query: 761 IAFSCP 778
           IAFSCP
Sbjct: 408 IAFSCP 413


>AF177342-1|AAG17986.1|  313|Homo sapiens unknown protein.
          Length = 313

 Score =  141 bits (341), Expect = 3e-33
 Identities = 73/142 (51%), Positives = 92/142 (64%), Gaps = 16/142 (11%)
 Frame = +3

Query: 165 MVSGRALHFVFKVADRTLTAKFYREILGMKV----LRHEEFSEGCEAACNG--------- 305
           M + RALHFVFKV +R  TA+FYR++LGMKV    +   E S    A C+          
Sbjct: 1   MAARRALHFVFKVGNRFQTARFYRDVLGMKVESCSVARLECSGAISAHCSDYTRITEDSF 60

Query: 306 --PYANRWSKTMVGYGPEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNW 479
             PY  +WSKTMVG+GPED HFV ELTYNYGV  Y+ GNDF+GIT+ SS+++  A+   W
Sbjct: 61  SKPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAVSNARKLEW 120

Query: 480 PIKE-HNGLKYVEAPGGYKFYI 542
           P+ E   G+   EAPGGYKFY+
Sbjct: 121 PLTEVAEGVFETEAPGGYKFYL 142



 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
 Frame = +2

Query: 587 SLASSNLAKSIAYWNGLLTLKLYEKTDKT--ALLGYSDDQAKLELVDIGEPINRAKAYGR 760
           +LA S+L KS+ YW  LL +K+YEK ++   ALLGY+D+Q KLEL  +   ++ A A+GR
Sbjct: 157 TLAVSDLQKSLNYWCNLLGMKIYEKDEEKQRALLGYADNQCKLELQGVKGGVDHAAAFGR 216

Query: 761 IAFSCP 778
           IAFSCP
Sbjct: 217 IAFSCP 222


>U63630-2|AAC52019.2| 1689|Homo sapiens DNA-PKcs protein.
          Length = 1689

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 775  TRECYAPVCLCAVYWFTNINKFQ 707
            TR+ Y P+ +  ++WFTN  KF+
Sbjct: 980  TRQLYEPLVMQLIHWFTNNKKFE 1002


>U47077-1|AAB39925.5| 4128|Homo sapiens DNA-dependent protein kinase
            catalytic subunit protein.
          Length = 4128

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 775  TRECYAPVCLCAVYWFTNINKFQ 707
            TR+ Y P+ +  ++WFTN  KF+
Sbjct: 980  TRQLYEPLVMQLIHWFTNNKKFE 1002


>U34994-1|AAC50210.3| 4097|Homo sapiens DNA dependent protein kinase
            catalytic subunit protein.
          Length = 4097

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 775  TRECYAPVCLCAVYWFTNINKFQ 707
            TR+ Y P+ +  ++WFTN  KF+
Sbjct: 980  TRQLYEPLVMQLIHWFTNNKKFE 1002


>AY316117-1|AAP69525.1| 4128|Homo sapiens protein kinase,
            DNA-activated, catalytic polypeptide protein.
          Length = 4128

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 775  TRECYAPVCLCAVYWFTNINKFQ 707
            TR+ Y P+ +  ++WFTN  KF+
Sbjct: 980  TRQLYEPLVMQLIHWFTNNKKFE 1002


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,263,689
Number of Sequences: 237096
Number of extensions: 2015769
Number of successful extensions: 3329
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3316
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)