Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3c06
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 99 3e-21
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 97 1e-20
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 96 2e-20
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 96 2e-20
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 78 8e-15
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 77 1e-14
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 57 1e-08
06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908 49 3e-06
10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107... 47 1e-05
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 47 2e-05
10_08_0871 - 21181798-21181917,21182024-21182065,21182162-211821... 43 3e-04
01_06_0153 - 27044553-27044669,27044842-27044964,27045066-270451... 34 0.10
02_05_0679 + 30817768-30818001 31 0.95
03_05_0489 - 24858483-24858637,24858811-24858921,24859013-248594... 30 2.2
01_03_0096 + 12492502-12492708,12500878-12501294,12501397-12501816 30 2.2
07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026 29 2.9
01_06_0695 - 31292622-31293317 29 2.9
06_03_0080 - 16320459-16320839,16321405-16321524,16321929-163220... 29 5.1
03_06_0658 - 35335639-35335731,35335814-35335871,35336213-353363... 29 5.1
10_08_0361 + 17207657-17207701,17208850-17209773 28 6.7
04_04_1100 + 30894575-30895012,30896082-30897044 28 6.7
10_08_0760 + 20381117-20381350,20381451-20381639,20382317-20382910 28 8.9
09_02_0103 - 4324578-4324639,4324848-4324983 28 8.9
08_02_0980 + 23255992-23256408,23256480-23256517,23256606-232566... 28 8.9
07_03_0699 + 20772415-20773450,20789050-20789606,20790971-207915... 28 8.9
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 28 8.9
03_01_0515 - 3864796-3865425 28 8.9
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 28 8.9
02_02_0096 - 6727844-6727957,6728149-6728247,6728332-6728410,672... 28 8.9
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 28 8.9
01_01_0715 - 5542648-5543219,5543352-5543544 28 8.9
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 99.1 bits (236), Expect = 3e-21
Identities = 64/179 (35%), Positives = 101/179 (56%), Gaps = 3/179 (1%)
Frame = +3
Query: 210 AVPASQVHTKCKL-VNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVII 386
A A++ T+ ++ +GV V+T+ +P VNSL+ V+ + E + ++A +++
Sbjct: 3 AAAAAKGRTEMEVGADGVAVITICNP--PVNSLSIDVLLSLKENYAEALRRNDVKA-IVV 59
Query: 387 SGKPGCFIAGADISMIENCKT-KEEVVSLSKRGHEIFR-RIEQSRKPYIAAIQGSCLGGG 560
+GK G F G DIS + + K E + +I +E + KP +AAI G LGGG
Sbjct: 60 TGKGGKFSGGFDISSFGSVQGGKVEQPKVGYISIDIITDTLEAATKPSVAAIDGLALGGG 119
Query: 561 LETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVK 737
LE A+AC RI+ ++ GLPE+ LG++PG GGTQRLP L + L++ L K +K
Sbjct: 120 LEVAMACHARISTPTAQ--LGLPELQLGVIPGFGGTQRLPRLVGLTKALEMMLLSKPIK 176
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 97.1 bits (231), Expect = 1e-20
Identities = 58/166 (34%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
Frame = +3
Query: 252 NGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISM 431
+GV V+T+ +P VN+L+ V+ + E S ++A ++++G G F G DI+
Sbjct: 13 DGVAVITVSNP--PVNALSLDVIASLQRDYGEALRRSDVKA-IVLTGAKGRFSGGFDINA 69
Query: 432 IENCKTKE-EVVS-LSKRGHEI--FRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAV 599
+ +K+ V+S ++K + F + + KP +AAI G LGGGLE + C R++
Sbjct: 70 FDKKPSKDCPVLSFVNKLNIYVVKFMLLPDAPKPSVAAIDGVALGGGLELVMVCHARVST 129
Query: 600 KDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVK 737
++ GLPE+ LG++PG GGTQRLP L +P L++ L K +K
Sbjct: 130 SSAQ--LGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLK 173
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 96.3 bits (229), Expect = 2e-20
Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Frame = +3
Query: 255 GVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMI 434
GV ++T+ +P VN+L+ V+ + + E + ++A ++++GK G F G DI+
Sbjct: 15 GVALITISNP--PVNALSIHVLYSLKDHYEEALRRNDVKA-IVVTGKGGVFSGGLDINTF 71
Query: 435 ENC-KTKEEVVSLSKRGHEIFRR-IEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDS 608
+ K E + + ++ +E + KP +AAI G LGGGLE ++ C+ RI++ +
Sbjct: 72 GAIQRNKAEQLKVDYVSIDVMTNTLEAAGKPSVAAINGPALGGGLEISMVCQARISIPTA 131
Query: 609 KTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVK 737
+ GLPE+ LG++P GGTQRLP L + L++ L K +K
Sbjct: 132 Q--LGLPELQLGVIPAFGGTQRLPRLVGLTKALEMMLMSKPIK 172
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 96.3 bits (229), Expect = 2e-20
Identities = 55/162 (33%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Frame = +3
Query: 252 NGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISM 431
+GV VVT+ +P VN+L+ +++ + E ++A ++++G G F G DI++
Sbjct: 14 DGVAVVTICNP--PVNALHPIIIQGLKEKYAEAMDRDDVKA-IVLTGAGGKFCGGFDINV 70
Query: 432 IENCKTKEEVVSLSKRGHEIFRRI-EQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDS 608
V + E+ + E +KP +AAIQG LGGGLE + C RI+ ++
Sbjct: 71 FTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHARISTPEA 130
Query: 609 KTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTV 734
+ GLPE+ LG++PG GGTQRLP L +P +++ L K +
Sbjct: 131 Q--LGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFI 170
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 77.8 bits (183), Expect = 8e-15
Identities = 50/152 (32%), Positives = 79/152 (51%)
Frame = +3
Query: 273 LDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTK 452
L+ P VK N++N + M + +V ++E + ++ ++ S PG F AGAD+
Sbjct: 52 LERPEVK-NAINWEAMRLLRGVVEKVEADDTVKVVLVTSSVPGVFCAGADL--------- 101
Query: 453 EEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPE 632
+ +S+ P IA I+G+ LGGGLE AL+C RI +++ GLPE
Sbjct: 102 -KALSI----------------PTIAVIEGAALGGGLELALSCDLRICGENAT--LGLPE 142
Query: 633 VMLGLLPGGGGTQRLPALTSIPTTLDLALTGK 728
L ++PG GGTQRLP + ++ TG+
Sbjct: 143 TGLAIIPGAGGTQRLPRIVGRSRAKEMIFTGR 174
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 77.4 bits (182), Expect = 1e-14
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Frame = +3
Query: 252 NGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADIS- 428
+G+ + L+ P + N++ ++++ + + + +++ ++ + ++ S P F AGAD+
Sbjct: 52 SGIVEMRLERPEAR-NAIGREMLQGLRSAIEKVKADATAKVVLLASSVPKVFCAGADLKE 110
Query: 429 --MIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVK 602
++ C+ +E V SL F E P IA ++G+ GGGLE AL+C RI +
Sbjct: 111 RRLMSPCEVREFVNSL----RSTFLSFEALSIPTIAIVEGAAFGGGLELALSCDLRICGE 166
Query: 603 DSKTGFGLPEVMLGLLPG---------GGGTQRLPALTSIPTTLDLALTGK 728
++ F LPE L ++PG GGTQRLP + +L TG+
Sbjct: 167 NAT--FSLPETGLAIIPGYVFKMALYFSGGTQRLPRIVGKSRAKELIFTGR 215
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 57.2 bits (132), Expect = 1e-08
Identities = 42/155 (27%), Positives = 78/155 (50%)
Frame = +3
Query: 258 VYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIE 437
V VVT++ P +N+L +M ++ ++ + G+ AAV+++G+ F +G D++ E
Sbjct: 23 VAVVTINRPKA-LNALTRPMMVSLAAAFRRLDADDGV-AAVVLAGRGRAFCSGVDLTAAE 80
Query: 438 NCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTG 617
K +V + + ++E+ RKP + AI G + G E ALAC +A + +K
Sbjct: 81 EV-FKGDVKDPAA---DPVVQMERCRKPIVGAIAGFAVTAGFEIALACDILVAGRSAK-- 134
Query: 618 FGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALT 722
F G+ P G +Q+L + +++LT
Sbjct: 135 FIDTHAKFGIFPSWGLSQKLSRVIGPNRAREVSLT 169
>06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908
Length = 88
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +3
Query: 210 AVPASQVHTKCKLV-NGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVII 386
A A++ K ++ NGV V+TLD P +N++N ++ ++E ETN ++ ++
Sbjct: 2 AAAAAEEFVKGRVTPNGVAVITLDRPKA-LNAMNLEMDLRYKAFLDEWETNPSVKCVLVE 60
Query: 387 SGKPGCFIAGADISMIENCKTKEEVVSL 470
S P F AG D+ + N T E++ +
Sbjct: 61 SSSPRAFSAGGDVKRLANDCTMPEIIEV 88
>10_08_1007 -
22210263-22210400,22210506-22210547,22210626-22210727,
22212239-22212337,22212413-22212473,22213311-22213432,
22217700-22217786,22217958-22218041,22218141-22218220,
22218404-22218467,22218904-22218972,22219099-22219179,
22219626-22219694,22220108-22220140
Length = 376
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 3/157 (1%)
Frame = +3
Query: 252 NGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADIS- 428
NGV L + ++N+L++ ++ E + G++ +I+ GK F AG D++
Sbjct: 40 NGVTRTLLMNRPKQLNALSSAMITGFLRCFTAYEEDEGVKL-LIVKGKGRAFCAGGDVAA 98
Query: 429 MIENCKTKEEVVSLSKRGHEIFRR--IEQSRKPYIAAIQGSCLGGGLETALACKYRIAVK 602
++ + S +E I KP ++ + G +GGG ++ ++R+ +
Sbjct: 99 VVRSINNDSWKYSAHFFRNEFLLNYIIATYNKPQVSLLTGIVMGGGAGVSIHGRFRVVTE 158
Query: 603 DSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDL 713
T F +PE LGL P G + L L L L
Sbjct: 159 S--TVFAMPETALGLFPDIGASYFLSRLPGFYVRLAL 193
>12_01_0945 +
9351915-9351929,9352221-9352386,9352903-9353024,
9353098-9353214,9356997-9357077,9357204-9357272,
9357727-9357790,9357988-9358067,9358164-9358247,
9358418-9358502,9359658-9359743,9359924-9360045,
9360841-9360901,9360981-9361166,9363622-9363723,
9363803-9363844,9363949-9364086
Length = 539
Score = 46.8 bits (106), Expect = 2e-05
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Frame = +3
Query: 252 NGVY-VVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADIS 428
NGV + L+ P ++N+L++ ++ E + G++ +I+ GK F AG D++
Sbjct: 146 NGVTRTLVLNRPK-QLNALSSAMITCFLRCFTAYEEDDGVKL-LIVKGKGRAFCAGGDVA 203
Query: 429 MIENCKTKEEVVSLSKRGHEIFRR-------IEQSRKPYIAAIQGSCLGGGLETALACKY 587
+ + K G FR I KP ++ + G +GGG ++ ++
Sbjct: 204 AVVRSINNDSW----KYGAHFFRNEFLLNYIIATYSKPQVSLLTGIVMGGGAGVSIHGRF 259
Query: 588 RIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPAL 686
R+ V DS T F +PE LGL P G + L L
Sbjct: 260 RV-VTDS-TVFAMPETALGLFPDIGASYFLSRL 290
>10_08_0871 -
21181798-21181917,21182024-21182065,21182162-21182191,
21182227-21182328,21182414-21182512,21182824-21182884,
21183447-21183568,21183673-21183758,21183880-21183964,
21184125-21184208,21184292-21184371,21184722-21184785,
21184859-21184927,21185263-21185343,21185438-21185578
Length = 421
Score = 42.7 bits (96), Expect = 3e-04
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Frame = +3
Query: 294 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTK---EEVV 464
+N+L T + ++ E N I V++ G F AG D+ + ++ +E
Sbjct: 67 LNALTTTMGARLNKFYMSWEDNPDI-GFVMMKGSGRAFCAGGDVVRLHQLISEGKLDECK 125
Query: 465 SLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLG 644
K + + KP++A + G +GGG ++ +RI +T F PEV +G
Sbjct: 126 DFFKTLYSFIYVLGTYLKPHVAILDGVTMGGGGGVSIPGTFRIVT--DRTVFATPEVHIG 183
Query: 645 LLPGGGGTQRLPALTSIPTTLDLALTGK 728
P + L LT LALTG+
Sbjct: 184 FHPDAAASFYLSHLTGHVGEY-LALTGE 210
>01_06_0153 -
27044553-27044669,27044842-27044964,27045066-27045161,
27045323-27045370,27046360-27046458,27046554-27046592,
27047032-27047133,27047225-27047347,27047535-27047783
Length = 331
Score = 34.3 bits (75), Expect = 0.10
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Frame = +3
Query: 255 GVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGK-PGCFIAGADISM 431
G+ +T++ P+ + N+ ++E+ + +S I +I++GK F +G D ++
Sbjct: 80 GIAKITINRPDRR-NAFRPLTVKELMRAFEDARDDSSI-GVIILTGKGTQSFCSGGDQAL 137
Query: 432 IENCKTKEEVVSLSKRGH----EIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAV 599
+ + V G ++ +I + KP IA + G +GGG + C IA
Sbjct: 138 ----RDADGYVDFDSFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAA 193
Query: 600 KDSKTGFGLPEVMLGLLPGGGGTQRLPAL 686
++ G P+V G G GT + L
Sbjct: 194 DNAIFGQTGPKV--GSFDAGYGTSIMSRL 220
>02_05_0679 + 30817768-30818001
Length = 77
Score = 31.1 bits (67), Expect = 0.95
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -2
Query: 682 AGNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPP 554
+GN+ +PPPP SP+ T G P LE +Y + +SN P
Sbjct: 37 SGNIALPPPP--SPHWTGGHRLPPLE----QKYSRSCPISNDP 73
>03_05_0489 -
24858483-24858637,24858811-24858921,24859013-24859421,
24859746-24859800,24860042-24860318,24860442-24860562,
24860831-24861438,24861552-24861741
Length = 641
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 661 PPPGKSPNMTSGSPN--PVLESFTAMRYLHARAVSNPPPR 548
PPPGK + +G PN L +T +RY A+ PPP+
Sbjct: 551 PPPGKYYVVDAGYPNRPGYLSPYTRIRYHVAQWNDGPPPQ 590
>01_03_0096 + 12492502-12492708,12500878-12501294,12501397-12501816
Length = 347
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 351 ETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVV--SLSKRGHEI 491
+ NSG+ A +I CF+ G D S++ N T E + S RG E+
Sbjct: 49 KNNSGVAAGLIRLHFHDCFVRGCDASVLINGSTTERSAGPNASLRGFEV 97
>07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026
Length = 961
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 366 IEAAVIISGKPGCFIAGADISMIENCKTKEEVVSL--SKRGHE 488
+ A + G G F G D S + NC K V+ L S+RG E
Sbjct: 572 VGATDCVYGAQGAFYKGLDFSKVLNCDRKPAVLDLPPSRRGDE 614
>01_06_0695 - 31292622-31293317
Length = 231
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 661 PPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQLP 539
P P + PN S S + S T+ + H RA P PR +P
Sbjct: 10 PMPQQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPRPVP 50
>06_03_0080 -
16320459-16320839,16321405-16321524,16321929-16322072,
16322493-16322544,16323009-16323100,16323912-16324014,
16324237-16324300,16324559-16324973
Length = 456
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 736 FTVLPVRARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSP 620
FT P R+ V + + +PPPP SP++ SP
Sbjct: 25 FTSSPARSGKVAVQPKQVTIRVFLPPPPSSSPSLAGNSP 63
>03_06_0658 -
35335639-35335731,35335814-35335871,35336213-35336355,
35336624-35336703,35336916-35337075,35337531-35337668,
35338487-35338567,35338640-35338693,35339192-35339297,
35339615-35339682,35340076-35340225,35340401-35340519,
35341151-35341362,35342118-35342205,35342365-35342479,
35343083-35343274,35343809-35344018
Length = 688
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 631 KSCWDFCPAVEGHRDYLLSPPY 696
K+ WDF PAV G R + PP+
Sbjct: 314 KNLWDFVPAVPGDRFLSMLPPW 335
>10_08_0361 + 17207657-17207701,17208850-17209773
Length = 322
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Frame = +3
Query: 141 LSALK-ILRSRKELFISGVHSR---KYAVPASQVHTKCKL-VNGVYVVTLDSPNV-KVNS 302
LSA++ I +S++E+F +G+H + K A ++ L V +++ P+V K
Sbjct: 41 LSAIEGIDKSKQEMFFAGMHLKNEDKLADYNIMTNSSVDLYVTDAIQISVRIPSVGKTTK 100
Query: 303 LNTQVMEEVSNIVNEIETNSGI 368
LN + +++I EIE GI
Sbjct: 101 LNMRKSNSIADIKAEIEQEEGI 122
>04_04_1100 + 30894575-30895012,30896082-30897044
Length = 466
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 631 SGSPNPVLESFTAMRY-LHARAVSNPPPRQLPCIAAI 524
+G LE+FTA + LHARA ++PP + C +
Sbjct: 255 AGPGRTKLEAFTAHLWQLHARAAASPPRHRRSCCMGV 291
>10_08_0760 + 20381117-20381350,20381451-20381639,20382317-20382910
Length = 338
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +3
Query: 315 VMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADIS-MIENCK----TKEEVVSLSKR 479
V +EVS V+ N G+ A ++ CF+ G D S +I++ K K+ + S R
Sbjct: 49 VQQEVSKAVS---ANPGLAAGLVRLHFHDCFVRGCDASVLIDSTKGNQAEKDAGPNTSLR 105
Query: 480 GHEIFRRIE 506
G E+ RI+
Sbjct: 106 GFEVVDRIK 114
>09_02_0103 - 4324578-4324639,4324848-4324983
Length = 65
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +3
Query: 147 ALKILRSRKELF---ISGVHSRKYAVPASQVHTKCKLVNGVY-VVTLDSP 284
A+ + RS L+ I+ HSR +V + VH +CKL+N Y +TL P
Sbjct: 14 AVPVARSSPPLYAVNITTSHSR--SVTSRFVHPRCKLINDNYSPITLSQP 61
>08_02_0980 +
23255992-23256408,23256480-23256517,23256606-23256654,
23256787-23256848,23256876-23256938,23256939-23257599
Length = 429
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/61 (27%), Positives = 21/61 (34%)
Frame = -2
Query: 718 RARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQLP 539
R R + M R+ P P SP P P LE + +PPP P
Sbjct: 290 RVRRPCLNMRPRSPRRSSSPAPPPSPRRILRRPRPTLELVAGAVSI---TTQDPPPSMRP 346
Query: 538 C 536
C
Sbjct: 347 C 347
>07_03_0699 +
20772415-20773450,20789050-20789606,20790971-20791567,
20792258-20792413
Length = 781
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +3
Query: 411 AGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYR 590
AG + + N T +V+ RGH + + R P + A + CL L A +R
Sbjct: 164 AGCLLGVTSNGNTALHLVA--SRGHAELAALIRVRAPSLVATRNRCLDTPLHCAAKAGHR 221
Query: 591 IAVK---DSKTGFGLPEVML 641
V D++TG EV L
Sbjct: 222 EVVARLLDTRTGVAEAEVEL 241
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -2
Query: 697 GMEVRAGNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPP 551
G++V L PPPP P T+ + F +M HA PPP
Sbjct: 237 GLKVETNGLAPPPPP--PPTTTTNFHDDQHFCFPSMPPFHAGVGPPPPP 283
>03_01_0515 - 3864796-3865425
Length = 209
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 664 PPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQLP 539
PPP P++TS P P S+PPP LP
Sbjct: 48 PPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLP 89
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -2
Query: 736 FTVLPVRARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSPNP-VLESFTAMRYLHARAVSN 560
F+V P ++V+G+++ N CV GK+P + S S A R V
Sbjct: 45 FSVKPTG--NEVIGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGERLVGT 102
Query: 559 PPPRQ 545
P RQ
Sbjct: 103 PAKRQ 107
>02_02_0096 -
6727844-6727957,6728149-6728247,6728332-6728410,
6728534-6728634,6728740-6728808,6729180-6729220,
6729992-6730836,6730924-6731027,6731479-6732354
Length = 775
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/96 (22%), Positives = 41/96 (42%)
Frame = +3
Query: 183 ISGVHSRKYAVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNS 362
+S S + V A +V+ CKLV G+Y D + + ++ +E + +++
Sbjct: 283 LSRHRSLLFKVLADRVNLPCKLVKGIYYTGTDEGAINLVKIDFDSVEYIVDLM------- 335
Query: 363 GIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSL 470
G +I S G ++ S + N +E V L
Sbjct: 336 GAPGTLIPSDISGSQFQDSNNSQLSNDAIEESVAEL 371
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 682 AGNLCVPPPPGKSPNMTSGSPNPVLESFTAMR 587
A L PPPP + P S +P++E+ +A+R
Sbjct: 364 APTLPPPPPPRRKPPSPSPPSSPLIENTSALR 395
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = -2
Query: 718 RARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPR 548
RA S V AG+ PPPP N T+ SP + +FTA + PPPR
Sbjct: 173 RAPSPPVPAPAPAGSPPPPPPPPAGGNFTAPSPAGGM-NFTAPA-PGTNGTAAPPPR 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,245,593
Number of Sequences: 37544
Number of extensions: 417961
Number of successful extensions: 1827
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1801
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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