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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3c06
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000263-3|AAL77185.1|  697|Caenorhabditis elegans Hypothetical ...   185   3e-47
AF000263-2|AAK21464.1|  755|Caenorhabditis elegans Hypothetical ...   185   3e-47
AF000263-1|AAK21462.1|  781|Caenorhabditis elegans Hypothetical ...   185   3e-47
Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical pr...   173   8e-44
Z27079-6|CAA81594.1|  288|Caenorhabditis elegans Hypothetical pr...    86   2e-17
AF045646-15|AAK29838.1|  284|Caenorhabditis elegans Enoyl-coa hy...    83   2e-16
AL132876-4|CAC48118.1|  256|Caenorhabditis elegans Hypothetical ...    77   1e-14
U50307-3|AAA92304.1|  258|Caenorhabditis elegans Enoyl-coa hydra...    68   8e-12
U53339-3|AAA96199.1|  278|Caenorhabditis elegans Hypothetical pr...    66   3e-11
U00050-8|AAM22062.1|  363|Caenorhabditis elegans Hypothetical pr...    55   6e-08
U00050-7|AAA50696.1|  386|Caenorhabditis elegans Hypothetical pr...    55   6e-08
AF125459-14|AAD12843.1|  297|Caenorhabditis elegans Hypothetical...    55   6e-08
U88308-10|AAB42326.2|  268|Caenorhabditis elegans Hypothetical p...    51   1e-06
Z74030-16|CAI79165.1|  481|Caenorhabditis elegans Hypothetical p...    29   4.5  
Z74030-7|CAA98447.2|  559|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z74030-6|CAA98444.2|  508|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U41554-3|AAA83298.2|  745|Caenorhabditis elegans Nematode astaci...    28   7.9  

>AF000263-3|AAL77185.1|  697|Caenorhabditis elegans Hypothetical
           protein T08B2.7c protein.
          Length = 697

 Score =  185 bits (450), Expect = 3e-47
 Identities = 91/176 (51%), Positives = 119/176 (67%)
 Frame = +3

Query: 210 AVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIIS 389
           + PA Q   + +    V VV +D PN K N LN  +  E+   +++++++  I++ V++S
Sbjct: 51  SAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESIKSIVVMS 110

Query: 390 GKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLET 569
           GKP  F+AGADI MI+   T     +LS+ G E F RIE+S+KP +AAI GSC+GGGLE 
Sbjct: 111 GKPNSFVAGADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCMGGGLEL 170

Query: 570 ALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVK 737
           ALAC YRIAV D KT   LPEVMLGLLPG GGTQRLP LT++   LDL LTGK +K
Sbjct: 171 ALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKKIK 226


>AF000263-2|AAK21464.1|  755|Caenorhabditis elegans Hypothetical
           protein T08B2.7b protein.
          Length = 755

 Score =  185 bits (450), Expect = 3e-47
 Identities = 91/176 (51%), Positives = 119/176 (67%)
 Frame = +3

Query: 210 AVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIIS 389
           + PA Q   + +    V VV +D PN K N LN  +  E+   +++++++  I++ V++S
Sbjct: 25  SAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESIKSIVVMS 84

Query: 390 GKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLET 569
           GKP  F+AGADI MI+   T     +LS+ G E F RIE+S+KP +AAI GSC+GGGLE 
Sbjct: 85  GKPNSFVAGADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCMGGGLEL 144

Query: 570 ALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVK 737
           ALAC YRIAV D KT   LPEVMLGLLPG GGTQRLP LT++   LDL LTGK +K
Sbjct: 145 ALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKKIK 200


>AF000263-1|AAK21462.1|  781|Caenorhabditis elegans Hypothetical
           protein T08B2.7a protein.
          Length = 781

 Score =  185 bits (450), Expect = 3e-47
 Identities = 91/176 (51%), Positives = 119/176 (67%)
 Frame = +3

Query: 210 AVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIIS 389
           + PA Q   + +    V VV +D PN K N LN  +  E+   +++++++  I++ V++S
Sbjct: 51  SAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESIKSIVVMS 110

Query: 390 GKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLET 569
           GKP  F+AGADI MI+   T     +LS+ G E F RIE+S+KP +AAI GSC+GGGLE 
Sbjct: 111 GKPNSFVAGADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCMGGGLEL 170

Query: 570 ALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVK 737
           ALAC YRIAV D KT   LPEVMLGLLPG GGTQRLP LT++   LDL LTGK +K
Sbjct: 171 ALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKKIK 226


>Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical
           protein C29F3.1 protein.
          Length = 755

 Score =  173 bits (422), Expect = 8e-44
 Identities = 86/197 (43%), Positives = 125/197 (63%), Gaps = 2/197 (1%)
 Frame = +3

Query: 153 KILRSRKELFISGVHSRKYAVPASQVHT--KCKLVNGVYVVTLDSPNVKVNSLNTQVMEE 326
           +++     +F + +  R ++  A  VH+  + +    V V+ +D PN   N LN  +  E
Sbjct: 4   RVVHRSSSVFRTNLSFRLFSQSAFAVHSTHRVEKQGDVAVMKIDLPNTTENVLNKALFAE 63

Query: 327 VSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIE 506
           ++  ++ ++++  ++A V++SGKP  F+AGADI M +  KT   V +L + G +    IE
Sbjct: 64  MNETLDRLQSDQSVKAIVVMSGKPNSFVAGADIQMFKAEKTAAGVSNLLREGQKQLLTIE 123

Query: 507 QSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPAL 686
            S+KP +AAI GSC+GGGLE ALAC YRIAV D KT  GLPEV LG++PG GGTQRLP L
Sbjct: 124 LSQKPIVAAIMGSCMGGGLEIALACHYRIAVNDKKTLLGLPEVTLGIMPGDGGTQRLPKL 183

Query: 687 TSIPTTLDLALTGKTVK 737
           T++   LDL LTGK +K
Sbjct: 184 TTVQNVLDLTLTGKRIK 200


>Z27079-6|CAA81594.1|  288|Caenorhabditis elegans Hypothetical
           protein T05G5.6 protein.
          Length = 288

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 52/159 (32%), Positives = 82/159 (51%)
 Frame = +3

Query: 258 VYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIE 437
           V ++ L+ P   +N+L  Q+M E+++ +  ++T+  +  A++I+G    F AGADI  + 
Sbjct: 45  VALIKLNRPKA-LNALCAQLMTELADALEVLDTDKSV-GAIVITGSERAFAAGADIKEMT 102

Query: 438 NCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTG 617
           N    E   + S      +  +   +KP IAA+ G  LGGG E A+ C   I     K  
Sbjct: 103 N---NEFATTFSGSFLSNWTAVSDVKKPVIAAVNGFALGGGNELAMMCD--IIYAGEKAR 157

Query: 618 FGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTV 734
           FG PE+ +G +PG GGTQR          +++ LTG  V
Sbjct: 158 FGQPEINIGTIPGAGGTQRWARAAGKSFAMEVCLTGNHV 196


>AF045646-15|AAK29838.1|  284|Caenorhabditis elegans Enoyl-coa
           hydratase protein 5 protein.
          Length = 284

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 48/160 (30%), Positives = 82/160 (51%)
 Frame = +3

Query: 255 GVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMI 434
           G+ ++ ++ P  K NSL    M++   +++E++ +      ++ S     F +GAD+   
Sbjct: 41  GITILNMNRP-AKKNSLGRVFMDQFREVLDELKYDPKTRVVILNSKCDNVFCSGADLKE- 98

Query: 435 ENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKT 614
               +++E         + F  +E+  +P IAAI G  LGGGLE ALAC  R+A + +K 
Sbjct: 99  RKTMSQQEATRFVNGLRDSFTDVERLPQPVIAAIDGFALGGGLELALACDIRVASQKAK- 157

Query: 615 GFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTV 734
             GL E    L+PG GG+QRL  +  +    +L  T + +
Sbjct: 158 -MGLVETKWALIPGAGGSQRLYRIVGVAKAKELIYTAEVL 196


>AL132876-4|CAC48118.1|  256|Caenorhabditis elegans Hypothetical
           protein Y105E8A.4 protein.
          Length = 256

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
 Frame = +3

Query: 258 VYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIE 437
           V ++TL+ P+  +N+L  ++M E+S  + ++E +      ++++G    F AGADI  + 
Sbjct: 13  VALITLNRPSA-LNALCRELMLELSENLLKVEKDQSYHV-IVLTGSEKAFAAGADIKEM- 69

Query: 438 NCKTKEEVVSLSKRGHEI-FRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKT 614
               K E   + +  +   +  +    KP IAA+ G  LGGG E AL C   I       
Sbjct: 70  ---AKLEFADVFENDYFTNWDTLSHITKPVIAAVNGFALGGGTELALMCD--IVYAGENA 124

Query: 615 GFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTG 725
            FG PE+ +G +PG GGTQR P   S    +++ L+G
Sbjct: 125 IFGQPEITIGTIPGLGGTQRWPRYVSKSVAMEICLSG 161


>U50307-3|AAA92304.1|  258|Caenorhabditis elegans Enoyl-coa
           hydratase protein 3 protein.
          Length = 258

 Score = 67.7 bits (158), Expect = 8e-12
 Identities = 45/159 (28%), Positives = 80/159 (50%)
 Frame = +3

Query: 258 VYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIE 437
           V+++ ++  N K N +N     ++ +   +   +S ++ AV+  G+ G F AG D+  + 
Sbjct: 15  VFLIGINRANKK-NCVNHATALQLIDAFEKFNEDSTMKTAVLY-GEGGTFCAGYDLESVS 72

Query: 438 NCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTG 617
             + +E       +   +   I + +KP IAAI+G  + GGLE +L    R++   +K G
Sbjct: 73  KAEHQEVSEDFCDKYRYMGPSIMKIKKPLIAAIEGFAVAGGLELSLMADLRVSSPSAKFG 132

Query: 618 FGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTV 734
                V + L+   GGT RLP +  +   LD+ LTG+ V
Sbjct: 133 VFCRRVGVPLI--DGGTVRLPRVIGLGRALDMILTGREV 169


>U53339-3|AAA96199.1|  278|Caenorhabditis elegans Hypothetical
           protein F58A6.1 protein.
          Length = 278

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
 Frame = +3

Query: 258 VYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIE 437
           VY V+L+ P+ K N+LN  + +E+ +    I+ +      VI+ G+   F +G D+S + 
Sbjct: 20  VYKVSLNRPS-KFNALNMVIWKEIGDCFQLIDEDPECRV-VILQGEGKHFCSGLDLSEV- 76

Query: 438 NCKTKEEVVSLSKRGHEIFRRI----------EQSRKPYIAAIQGSCLGGGLETALACKY 587
                EE    ++RG  I R I          ++  KP I A+ G CLG  L+ A AC  
Sbjct: 77  TFLNGEEADDSARRGRSILRTIKFMQKQFTYIDECSKPVILAMHGYCLGAALDIATACDV 136

Query: 588 RIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTL-DLALTGK 728
           R+A KD+     + EV +G+    G   RLP +    + + D++L+ +
Sbjct: 137 RVATKDAV--LSVKEVDIGMAADVGTLNRLPKIVGNHSWIKDISLSAR 182


>U00050-8|AAM22062.1|  363|Caenorhabditis elegans Hypothetical
           protein F09F7.4b protein.
          Length = 363

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
 Frame = +3

Query: 264 VVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADI-SMIEN 440
           VVTL+ P   +N+LN +++ E    +    ++S ++  ++       F AG D+ +++ +
Sbjct: 23  VVTLNRPKA-LNALNLEMVREFYPKLQAWNSSSDVDLVILKGSGDKAFCAGGDVLAVVRS 81

Query: 441 CKTKEEVVSLSKRGHEIFRR-------IEQSRKPYIAAIQGSCLGGGLETALACKYRIAV 599
            K  E     +    + FR        I    K Y+  I G  +GGG   ++  ++R+A 
Sbjct: 82  FKDSESGKECTMH-KDFFREEYILNHLIGTLNKQYVCLIDGIVMGGGCGLSVNGRFRVAT 140

Query: 600 KDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTG 725
           +  KT   +PE  LGL P  GG+  L  L      + LALTG
Sbjct: 141 E--KTMLAMPETALGLFPDVGGSYFLSRLKG-NLGMYLALTG 179


>U00050-7|AAA50696.1|  386|Caenorhabditis elegans Hypothetical
           protein F09F7.4a protein.
          Length = 386

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
 Frame = +3

Query: 264 VVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADI-SMIEN 440
           VVTL+ P   +N+LN +++ E    +    ++S ++  ++       F AG D+ +++ +
Sbjct: 46  VVTLNRPKA-LNALNLEMVREFYPKLQAWNSSSDVDLVILKGSGDKAFCAGGDVLAVVRS 104

Query: 441 CKTKEEVVSLSKRGHEIFRR-------IEQSRKPYIAAIQGSCLGGGLETALACKYRIAV 599
            K  E     +    + FR        I    K Y+  I G  +GGG   ++  ++R+A 
Sbjct: 105 FKDSESGKECTMH-KDFFREEYILNHLIGTLNKQYVCLIDGIVMGGGCGLSVNGRFRVAT 163

Query: 600 KDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTG 725
           +  KT   +PE  LGL P  GG+  L  L      + LALTG
Sbjct: 164 E--KTMLAMPETALGLFPDVGGSYFLSRLKG-NLGMYLALTG 202


>AF125459-14|AAD12843.1|  297|Caenorhabditis elegans Hypothetical
           protein Y25C1A.13 protein.
          Length = 297

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
 Frame = +3

Query: 258 VYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADIS--M 431
           VY V L+ P  K+N+    +  E    ++ +  +    + +IISG+   F AG DI+  +
Sbjct: 36  VYNVKLNRP-AKLNTFTMDMWREFKKAIDSLADDPKCRS-IIISGEGKAFCAGIDIAHGL 93

Query: 432 IENCKT-KEEVVSLSKRGH----------EIFRRIEQSRKPYIAAIQGSCLGGGLETALA 578
            +  +  +++ + + ++G           + +  +E+  KP IA+I   CLG G++   A
Sbjct: 94  SDILRIIQDDTIEVGRKGRLVRKFIGEIQDCYTALERCPKPIIASIHSHCLGAGIDLITA 153

Query: 579 CKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPT-TLDLALTGK 728
           C  R+A +D+   F + EV +GL    G   R+  +    + T D+A T +
Sbjct: 154 CDIRVASQDAI--FSIREVDVGLAADIGTLNRIQKVVGNDSWTRDVAFTAR 202


>U88308-10|AAB42326.2|  268|Caenorhabditis elegans Hypothetical
           protein C32E8.9 protein.
          Length = 268

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 37/140 (26%), Positives = 64/140 (45%)
 Frame = +3

Query: 267 VTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCK 446
           V LD P  K N L+ ++M++          +    A +++SG    F +GAD+ +I++  
Sbjct: 38  VILDRPE-KNNCLSGEMMKQFGEHTELFSDDQN--AIIVVSGVGKSFCSGADLGLIKDIS 94

Query: 447 TKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALACKYRIAVKDSKTGFGL 626
            ++  V + +    I   +  S    IA I G  LGG  E   +   RIA   SK  F  
Sbjct: 95  DQKLGVQMFEYMSSILSLLHSSPAISIAKIHGHALGGATEICSSTDIRIAHSGSKIAFF- 153

Query: 627 PEVMLGLLPGGGGTQRLPAL 686
            +  +G++P  GG + +  +
Sbjct: 154 -QSKMGIVPSWGGAEYMEGI 172


>Z74030-16|CAI79165.1|  481|Caenorhabditis elegans Hypothetical
           protein D1054.9e protein.
          Length = 481

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 243 KLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAV 380
           K +NGV    + S N+  N  NT+++  + ++V + +  S  EA +
Sbjct: 377 KAINGVSASGVSSSNLLTNEPNTELLAAIKDVVAKFKVASLDEAGI 422


>Z74030-7|CAA98447.2|  559|Caenorhabditis elegans Hypothetical
           protein D1054.9b protein.
          Length = 559

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 243 KLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAV 380
           K +NGV    + S N+  N  NT+++  + ++V + +  S  EA +
Sbjct: 404 KAINGVSASGVSSSNLLTNEPNTELLAAIKDVVAKFKVASLDEAGI 449


>Z74030-6|CAA98444.2|  508|Caenorhabditis elegans Hypothetical
           protein D1054.9a protein.
          Length = 508

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 243 KLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAV 380
           K +NGV    + S N+  N  NT+++  + ++V + +  S  EA +
Sbjct: 404 KAINGVSASGVSSSNLLTNEPNTELLAAIKDVVAKFKVASLDEAGI 449


>Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical
           protein T23G5.2a protein.
          Length = 719

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 632 SHVGTFARRWRDTEITCSHLHTYNFG 709
           S  GT+  +WR  E    H  T++FG
Sbjct: 644 SRAGTYIMQWRVPETAAGHSSTFDFG 669


>U41554-3|AAA83298.2|  745|Caenorhabditis elegans Nematode astacin
           protease protein38 protein.
          Length = 745

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = -2

Query: 394 LPDIMTAASIPEFVSISFTMLLTSSITWVLSEFTLTFGESKVTT*TPLTNL 242
           L  + ++++  E  ++S T   T S TW+ +E +   GE+++TT +P   L
Sbjct: 549 LTPLTSSSTTTESTTVSST---TQSTTWLPTEPSFATGETEITTASPTITL 596


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,392,806
Number of Sequences: 27780
Number of extensions: 353836
Number of successful extensions: 1253
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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