Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3c01
(324 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U87223-1|AAB48481.1| 1384|Homo sapiens contactin associated prot... 33 0.15
BC112148-1|AAI12149.1| 466|Homo sapiens GRINL1A combined protei... 29 2.4
BC101645-1|AAI01646.1| 466|Homo sapiens GRINL1A combined protei... 29 2.4
AY353058-1|AAQ76834.1| 438|Homo sapiens GRINL1A combined protei... 29 2.4
AY353057-1|AAQ76833.1| 466|Homo sapiens GRINL1A combined protei... 29 2.4
AY334561-1|AAQ76828.1| 379|Homo sapiens GRINL1A complex protein... 29 2.4
AY334560-1|AAQ76827.1| 407|Homo sapiens GRINL1A complex protein... 29 2.4
AY333779-1|AAQ76826.1| 414|Homo sapiens GRINL1A complex protein... 29 2.4
AY331564-1|AAQ76825.1| 390|Homo sapiens GRINL1A combined protei... 29 2.4
AY237639-1|AAP75897.1| 438|Homo sapiens GRINL1A upstream protei... 29 2.4
AY208913-1|AAP41549.1| 445|Homo sapiens GRINL1A complex protein... 29 2.4
AY207459-1|AAP41548.1| 466|Homo sapiens GRINL1A upstream protei... 29 2.4
AY207007-1|AAO39707.1| 550|Homo sapiens GRINL1A complex protein... 29 2.4
AK055535-1|BAB70944.1| 466|Homo sapiens protein ( Homo sapiens ... 29 2.4
BC125129-1|AAI25130.1| 892|Homo sapiens zinc finger protein 512... 29 3.2
BC125128-1|AAI25129.1| 892|Homo sapiens zinc finger protein 512... 29 3.2
AL136924-1|CAB66858.1| 861|Homo sapiens hypothetical protein pr... 29 3.2
AL132821-2|CAI23572.1| 944|Homo sapiens Ras and Rab interactor ... 29 3.2
AL118506-12|CAC15498.3| 892|Homo sapiens RP4-591C20.6 protein. 29 3.2
AL049538-1|CAI19340.1| 944|Homo sapiens Ras and Rab interactor ... 29 3.2
AB060339-1|BAB84317.1| 895|Homo sapiens RIN2 protein. 29 3.2
AB033022-1|BAA86510.1| 851|Homo sapiens KIAA1196 protein protein. 29 3.2
AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog (Drosop... 29 4.3
AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog (Drosop... 29 4.3
BC001325-1|AAH01325.1| 372|Homo sapiens Unknown (protein for IM... 28 5.6
AL355001-1|CAI16178.1| 493|Homo sapiens zinc finger, MYM-type 5... 28 7.4
AL354808-2|CAI41001.1| 493|Homo sapiens zinc finger, MYM-type 5... 28 7.4
AF217972-1|AAG17215.1| 139|Homo sapiens unknown protein. 28 7.4
AF217965-1|AAG17208.1| 139|Homo sapiens unknown protein. 28 7.4
AB058719-1|BAB47445.1| 1162|Homo sapiens KIAA1816 protein protein. 28 7.4
BC009518-1|AAH09518.1| 821|Homo sapiens coiled-coil domain cont... 27 9.8
AK057326-1|BAB71428.1| 607|Homo sapiens protein ( Homo sapiens ... 27 9.8
AF034187-1|AAD50529.1| 122|Homo sapiens Ndr Ser/Thr kinase-like... 27 9.8
>U87223-1|AAB48481.1| 1384|Homo sapiens contactin associated protein
protein.
Length = 1384
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +1
Query: 106 LISNPDPGFSR---PVIGQPGYVPISTGPAYVNRPYNRPQRP 222
++S P PG+ P PGYVP GP Y Y RP RP
Sbjct: 1027 MLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRP 1068
>BC112148-1|AAI12149.1| 466|Homo sapiens GRINL1A combined protein
protein.
Length = 466
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>BC101645-1|AAI01646.1| 466|Homo sapiens GRINL1A combined protein
protein.
Length = 466
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY353058-1|AAQ76834.1| 438|Homo sapiens GRINL1A combined protein
Gcom9 precursor protein.
Length = 438
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY353057-1|AAQ76833.1| 466|Homo sapiens GRINL1A combined protein
Gcom8 precursor protein.
Length = 466
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY334561-1|AAQ76828.1| 379|Homo sapiens GRINL1A complex protein
Gcom5 precursor protein.
Length = 379
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY334560-1|AAQ76827.1| 407|Homo sapiens GRINL1A complex protein
Gcom4 precursor protein.
Length = 407
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY333779-1|AAQ76826.1| 414|Homo sapiens GRINL1A complex protein
Gcom3 precursor protein.
Length = 414
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY331564-1|AAQ76825.1| 390|Homo sapiens GRINL1A combined protein
Gcom10 precursor protein.
Length = 390
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY237639-1|AAP75897.1| 438|Homo sapiens GRINL1A upstream protein 2
precursor protein.
Length = 438
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY208913-1|AAP41549.1| 445|Homo sapiens GRINL1A complex protein 2
precursor protein.
Length = 445
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY207459-1|AAP41548.1| 466|Homo sapiens GRINL1A upstream protein 1
precursor protein.
Length = 466
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY207007-1|AAO39707.1| 550|Homo sapiens GRINL1A complex protein 1
Gcom1 precursor protein.
Length = 550
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AK055535-1|BAB70944.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ30973 fis, clone HEART2000506, weakly similar to
ENAMELIN. ).
Length = 466
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 147 DYGPRKARIRVRDENLSVGHSQQSEDENH 61
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>BC125129-1|AAI25130.1| 892|Homo sapiens zinc finger protein 512B
protein.
Length = 892
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 127 GFSRPV-IGQPGYVPISTGPAYVNRPYN--RPQRPSKAVNN*NPVPRSSRWEVSNAMPHT 297
G S+PV IG+P V +S P +++P + RP +KA+ PVP + VS MP T
Sbjct: 193 GVSKPVTIGKP--VGVSK-PIGISKPVSVGRPMPVTKAIPVTRPVPVTKPVTVSRPMPVT 249
Query: 298 HTRHDTK 318
TK
Sbjct: 250 KAMPVTK 256
>BC125128-1|AAI25129.1| 892|Homo sapiens zinc finger protein 512B
protein.
Length = 892
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 127 GFSRPV-IGQPGYVPISTGPAYVNRPYN--RPQRPSKAVNN*NPVPRSSRWEVSNAMPHT 297
G S+PV IG+P V +S P +++P + RP +KA+ PVP + VS MP T
Sbjct: 193 GVSKPVTIGKP--VGVSK-PIGISKPVSVGRPMPVTKAIPVTRPVPVTKPVTVSRPMPVT 249
Query: 298 HTRHDTK 318
TK
Sbjct: 250 KAMPVTK 256
>AL136924-1|CAB66858.1| 861|Homo sapiens hypothetical protein
protein.
Length = 861
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 166 PISTGPAYVNRPYNRPQRPSKAVNN*NPVPRSSRWEVSNAMPHT--HTRH 309
P + G P RP P A+N+ + PR +R E +MP T H +H
Sbjct: 262 PNANGTERTRSPPPRP--PPPAINSLHTSPRLARTETQTSMPETVNHNKH 309
>AL132821-2|CAI23572.1| 944|Homo sapiens Ras and Rab interactor 2
protein.
Length = 944
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 166 PISTGPAYVNRPYNRPQRPSKAVNN*NPVPRSSRWEVSNAMPHT--HTRH 309
P + G P RP P A+N+ + PR +R E +MP T H +H
Sbjct: 345 PNANGTERTRSPPPRP--PPPAINSLHTSPRLARTETQTSMPETVNHNKH 392
>AL118506-12|CAC15498.3| 892|Homo sapiens RP4-591C20.6 protein.
Length = 892
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 127 GFSRPV-IGQPGYVPISTGPAYVNRPYN--RPQRPSKAVNN*NPVPRSSRWEVSNAMPHT 297
G S+PV IG+P V +S P +++P + RP +KA+ PVP + VS MP T
Sbjct: 193 GVSKPVTIGKP--VGVSK-PIGISKPVSVGRPMPVTKAIPVTRPVPVTKPVTVSRPMPVT 249
Query: 298 HTRHDTK 318
TK
Sbjct: 250 KAMPVTK 256
>AL049538-1|CAI19340.1| 944|Homo sapiens Ras and Rab interactor 2
protein.
Length = 944
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 166 PISTGPAYVNRPYNRPQRPSKAVNN*NPVPRSSRWEVSNAMPHT--HTRH 309
P + G P RP P A+N+ + PR +R E +MP T H +H
Sbjct: 345 PNANGTERTRSPPPRP--PPPAINSLHTSPRLARTETQTSMPETVNHNKH 392
>AB060339-1|BAB84317.1| 895|Homo sapiens RIN2 protein.
Length = 895
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 166 PISTGPAYVNRPYNRPQRPSKAVNN*NPVPRSSRWEVSNAMPHT--HTRH 309
P + G P RP P A+N+ + PR +R E +MP T H +H
Sbjct: 296 PNANGTERTRSPPPRP--PPPAINSLHTSPRLARTETQTSMPETVNHNKH 343
>AB033022-1|BAA86510.1| 851|Homo sapiens KIAA1196 protein protein.
Length = 851
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 127 GFSRPV-IGQPGYVPISTGPAYVNRPYN--RPQRPSKAVNN*NPVPRSSRWEVSNAMPHT 297
G S+PV IG+P V +S P +++P + RP +KA+ PVP + VS MP T
Sbjct: 152 GVSKPVTIGKP--VGVSK-PIGISKPVSVGRPMPVTKAIPVTRPVPVTKPVTVSRPMPVT 208
Query: 298 HTRHDTK 318
TK
Sbjct: 209 KAMPVTK 215
>AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +1
Query: 166 PISTGPAYVNRPYNRPQRPSKAVNN*NPVPRSSR---WEVSNAMP 291
P+ A V RP N+ RPS VN + P +++ W SN P
Sbjct: 364 PVLPHYATVPRPLNKNSRPSSPVNTPSSQPPATKPCAWSTSNFSP 408
>AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +1
Query: 166 PISTGPAYVNRPYNRPQRPSKAVNN*NPVPRSSR---WEVSNAMP 291
P+ A V RP N+ RPS VN + P +++ W SN P
Sbjct: 364 PVLPHYATVPRPLNKNSRPSSPVNTPSSQPPATKPCAWSTSNFSP 408
>BC001325-1|AAH01325.1| 372|Homo sapiens Unknown (protein for
IMAGE:3456579) protein.
Length = 372
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +1
Query: 124 PGFSRPVIGQPGYVPISTGPAYVNR----PYNRPQRPSKAVNN*NPVPRSSRWEVSNAMP 291
P + V G P P+S PA++ + Y Q+P++ V + P+SS+ S A
Sbjct: 218 PNMAAKVNGNPHSTPVSGPPAFLTQGWGSTYQAWQQPTQQVPSQQSQPQSSQPNYSKAWE 277
Query: 292 HTHTRHDTKKK 324
+ + +++++
Sbjct: 278 DYYKKTESRRQ 288
>AL355001-1|CAI16178.1| 493|Homo sapiens zinc finger, MYM-type 5
protein.
Length = 493
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 297 CVWHCVAYFPPRAPGNGVLII 235
C HC Y P ++ GN +L+I
Sbjct: 203 CCEHCGEYMPSKSTGNNILVI 223
>AL354808-2|CAI41001.1| 493|Homo sapiens zinc finger, MYM-type 5
protein.
Length = 493
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 297 CVWHCVAYFPPRAPGNGVLII 235
C HC Y P ++ GN +L+I
Sbjct: 203 CCEHCGEYMPSKSTGNNILVI 223
>AF217972-1|AAG17215.1| 139|Homo sapiens unknown protein.
Length = 139
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 315 CIMSCVCVWHCVAYFPPR 262
C+ CVCV CV F PR
Sbjct: 119 CVCVCVCVCVCVCVFSPR 136
>AF217965-1|AAG17208.1| 139|Homo sapiens unknown protein.
Length = 139
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 315 CIMSCVCVWHCVAYFPPR 262
C+ CVCV CV F PR
Sbjct: 119 CVCVCVCVCVCVCVFSPR 136
>AB058719-1|BAB47445.1| 1162|Homo sapiens KIAA1816 protein protein.
Length = 1162
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = -1
Query: 288 HCVAYFPPRAPGNGVLIINCLTWPLGSVVGPVYVRRS--STYWHVSGLTDYGPRKARIRV 115
H PPR PGNG L+ GS GPV V S S + + ++A++
Sbjct: 454 HTPGQAPPR-PGNGYLLNPAAVTVAGSASGPVAVPSSDMSPAEQLKQMAAQQQQRAKLMQ 512
Query: 114 RDENLSVGHSQQSEDENHEE 55
+ + QQ + + ++
Sbjct: 513 QKQQQQQQQQQQQQQQQQQQ 532
>BC009518-1|AAH09518.1| 821|Homo sapiens coiled-coil domain
containing 45 protein.
Length = 821
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -1
Query: 165 HVSGLTDYGPRKAR--IRVRDENLSVGHSQQSEDEN-HEEFH 49
H G+ +YGP+K+R + +R + HS N H++FH
Sbjct: 421 HSDGIVEYGPKKSRPGLSMRRKPPYRSHSLSPSPVNKHKQFH 462
>AK057326-1|BAB71428.1| 607|Homo sapiens protein ( Homo sapiens
cDNA FLJ32764 fis, clone TESTI2001829. ).
Length = 607
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -1
Query: 165 HVSGLTDYGPRKAR--IRVRDENLSVGHSQQSEDEN-HEEFH 49
H G+ +YGP+K+R + +R + HS N H++FH
Sbjct: 421 HSDGIVEYGPKKSRPGLSMRRKPPYRSHSLSPSPVNKHKQFH 462
>AF034187-1|AAD50529.1| 122|Homo sapiens Ndr Ser/Thr kinase-like
protein protein.
Length = 122
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -1
Query: 315 CIMSCVCVWH-CVAYFP 268
C+ CVCVW C++ FP
Sbjct: 21 CVCVCVCVWWLCISLFP 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,909,375
Number of Sequences: 237096
Number of extensions: 1135384
Number of successful extensions: 3086
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3082
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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