Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3b23
(730 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-2265|AAF53230.1| 255|Drosophila melanogaster CG16800-P... 33 0.40
AY484701-1|AAR85347.1| 881|Drosophila melanogaster dysfusion pr... 31 2.1
AE014297-3920|AAF56569.3| 881|Drosophila melanogaster CG32474-P... 31 2.1
AB095028-1|BAE53416.1| 918|Drosophila melanogaster bHLH-PAS pro... 31 2.1
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm... 30 3.7
BT003589-1|AAO39592.1| 796|Drosophila melanogaster LD03662p pro... 30 3.7
AY129446-1|AAM76188.1| 1009|Drosophila melanogaster LD20608p pro... 30 3.7
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P... 30 3.7
AE014297-2554|AAF55575.2| 1784|Drosophila melanogaster CG31224-P... 30 3.7
AE014296-390|AAF47594.1| 553|Drosophila melanogaster CG12361-PA... 29 4.9
AY061123-1|AAL28671.1| 611|Drosophila melanogaster LD10456p pro... 29 6.5
AE014134-3589|AAF57260.3| 611|Drosophila melanogaster CG3278-PA... 29 6.5
BT023507-1|AAY84907.1| 746|Drosophila melanogaster LD11294p pro... 29 8.6
AY787838-1|AAX14634.1| 740|Drosophila melanogaster fork head tr... 29 8.6
AY787837-1|AAX14633.1| 654|Drosophila melanogaster fork head tr... 29 8.6
AE014298-1307|AAF46467.2| 370|Drosophila melanogaster CG15370-P... 29 8.6
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 29 8.6
AE014296-1909|AAF50094.2| 740|Drosophila melanogaster CG11799-P... 29 8.6
AE014296-1908|AAN11901.1| 740|Drosophila melanogaster CG11799-P... 29 8.6
AE014296-1907|AAF50093.2| 740|Drosophila melanogaster CG11799-P... 29 8.6
AE014296-1906|AAF50092.2| 740|Drosophila melanogaster CG11799-P... 29 8.6
AE014296-1905|AAN11900.1| 699|Drosophila melanogaster CG11799-P... 29 8.6
>AE014134-2265|AAF53230.1| 255|Drosophila melanogaster CG16800-PA
protein.
Length = 255
Score = 33.1 bits (72), Expect = 0.40
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 112 RGHFSDAGADGEHARREHHEKFHYHS 35
+GH G GEH E HEK H HS
Sbjct: 78 KGHHDKEGKKGEHGEEEGHEKKHKHS 103
>AY484701-1|AAR85347.1| 881|Drosophila melanogaster dysfusion
protein.
Length = 881
Score = 30.7 bits (66), Expect = 2.1
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +1
Query: 475 KEQRPHQLEVHY-----LVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRH 639
++Q PHQ + H L +QQ LQ QH +Q + T + + P + QH +
Sbjct: 27 QQQHPHQQQQHLQHVLQLQQQQQQHLQQQQHHLQHQMHTHHNFQQHETSPTVSQQQHMQQ 86
Query: 640 HQGAVVPPAHEVRKRR 687
Q H ++++
Sbjct: 87 QQPQTTQQQHATQQQQ 102
>AE014297-3920|AAF56569.3| 881|Drosophila melanogaster CG32474-PA
protein.
Length = 881
Score = 30.7 bits (66), Expect = 2.1
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +1
Query: 475 KEQRPHQLEVHY-----LVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRH 639
++Q PHQ + H L +QQ LQ QH +Q + T + + P + QH +
Sbjct: 27 QQQHPHQQQQHLQHVLQLQQQQQQHLQQQQHHLQHQMHTHHNFQQHETSPTVSQQQHMQQ 86
Query: 640 HQGAVVPPAHEVRKRR 687
Q H ++++
Sbjct: 87 QQPQTTQQQHATQQQQ 102
>AB095028-1|BAE53416.1| 918|Drosophila melanogaster bHLH-PAS
protein similar to humanNXF protein.
Length = 918
Score = 30.7 bits (66), Expect = 2.1
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +1
Query: 475 KEQRPHQLEVHY-----LVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRH 639
++Q PHQ + H L +QQ LQ QH +Q + T + + P + QH +
Sbjct: 63 QQQHPHQQQQHLQHVLQLQQQQQQHLQQQQHHLQHQMHTHHNFQQHETSPTVSQQQHMQQ 122
Query: 640 HQGAVVPPAHEVRKRR 687
Q H ++++
Sbjct: 123 QQPQTTQQQHATQQQQ 138
>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
transmembrane protein protein.
Length = 3004
Score = 29.9 bits (64), Expect = 3.7
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +2
Query: 194 RQSLEYENQGKGSIIQNVVNNLIIDKSRNTMEYCYKLWVGNGQHI-VRKYFPYNFRLIMA 370
R Y G+ S + N+ ++ N Y W +GQ + V P+ FR
Sbjct: 2340 RMEFSYGVHGRISQTRTYTRNMAVNSYTNVKNYT---WDCDGQLVGVEAQEPWGFRYDDN 2396
Query: 371 GNFVKLIYRNYNLALKLGPTLDPANERLA-YGDGKEK 478
GN + L YR + ++ A +R+ +G+G+ K
Sbjct: 2397 GNLLSLTYRGNTIPMEYN-----AQDRIVKFGEGQYK 2428
>BT003589-1|AAO39592.1| 796|Drosophila melanogaster LD03662p
protein.
Length = 796
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 490 HQLEVHYLVGEQQSVLQDPQH*V-QPVLETKFDD*LQHSRPCYIRHQHRRHHQGAVVPP 663
HQ + H+ +QQS Q QH QP L+ + L P + Q ++ Q VVPP
Sbjct: 58 HQQQAHF-PHQQQSPQQQQQHSQHQPALKFSYATALPPPPPLQLFTQQQQQQQQTVVPP 115
>AY129446-1|AAM76188.1| 1009|Drosophila melanogaster LD20608p
protein.
Length = 1009
Score = 29.9 bits (64), Expect = 3.7
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +2
Query: 194 RQSLEYENQGKGSIIQNVVNNLIIDKSRNTMEYCYKLWVGNGQHI-VRKYFPYNFRLIMA 370
R Y G+ S + N+ ++ N Y W +GQ + V P+ FR
Sbjct: 345 RMEFSYGVHGRISQTRTYTRNMAVNSYTNVKNYT---WDCDGQLVGVEAQEPWGFRYDDN 401
Query: 371 GNFVKLIYRNYNLALKLGPTLDPANERLA-YGDGKEK 478
GN + L YR + ++ A +R+ +G+G+ K
Sbjct: 402 GNLLSLTYRGNTIPMEYN-----AQDRIVKFGEGQYK 433
>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
protein.
Length = 3004
Score = 29.9 bits (64), Expect = 3.7
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +2
Query: 194 RQSLEYENQGKGSIIQNVVNNLIIDKSRNTMEYCYKLWVGNGQHI-VRKYFPYNFRLIMA 370
R Y G+ S + N+ ++ N Y W +GQ + V P+ FR
Sbjct: 2340 RMEFSYGVHGRISQTRTYTRNMAVNSYTNVKNYT---WDCDGQLVGVEAQEPWGFRYDDN 2396
Query: 371 GNFVKLIYRNYNLALKLGPTLDPANERLA-YGDGKEK 478
GN + L YR + ++ A +R+ +G+G+ K
Sbjct: 2397 GNLLSLTYRGNTIPMEYN-----AQDRIVKFGEGQYK 2428
>AE014297-2554|AAF55575.2| 1784|Drosophila melanogaster CG31224-PA
protein.
Length = 1784
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 490 HQLEVHYLVGEQQSVLQDPQH*V-QPVLETKFDD*LQHSRPCYIRHQHRRHHQGAVVPP 663
HQ + H+ +QQS Q QH QP L+ + L P + Q ++ Q VVPP
Sbjct: 232 HQQQAHF-PHQQQSPQQQQQHSQHQPALKFSYATALPPPPPLQLFTQQQQQQQQTVVPP 289
>AE014296-390|AAF47594.1| 553|Drosophila melanogaster CG12361-PA
protein.
Length = 553
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +1
Query: 478 EQRPHQLEVHYLVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQGA 651
+Q HQ + H+ +QQ PQH QP+ QHS P H H HH GA
Sbjct: 2 QQHSHQYQQHH---QQQQPHSHPQH--QPLAVPGH----QHSHPH--SHHHHHHHPGA 48
>AY061123-1|AAL28671.1| 611|Drosophila melanogaster LD10456p
protein.
Length = 611
Score = 29.1 bits (62), Expect = 6.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 564 WLYLVLWILKYTLLFSHKVMNFQLMRSLFFSLPSP 460
+LY VLW+L+Y +F V L + L + +P
Sbjct: 208 YLYNVLWLLEYKPIFEELVFQLVLQKLLLLDVNAP 242
>AE014134-3589|AAF57260.3| 611|Drosophila melanogaster CG3278-PA,
isoform A protein.
Length = 611
Score = 29.1 bits (62), Expect = 6.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 564 WLYLVLWILKYTLLFSHKVMNFQLMRSLFFSLPSP 460
+LY VLW+L+Y +F V L + L + +P
Sbjct: 208 YLYNVLWLLEYKPIFEELVFQLVLQKLLLLDVNAP 242
>BT023507-1|AAY84907.1| 746|Drosophila melanogaster LD11294p
protein.
Length = 746
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 475 KEQRPHQLEVHYLVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQGAV 654
++Q PH H+L +QQ Q P H P+ T L H+ + Q +R V
Sbjct: 311 QQQHPHHPPAHHLPLQQQQQQQQPAH--HPLPHTPHHP-LHHTA---LHQQQQRSGSIVV 364
Query: 655 VPPA 666
PPA
Sbjct: 365 APPA 368
>AY787838-1|AAX14634.1| 740|Drosophila melanogaster fork head
transcription factorlong isoform protein.
Length = 740
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 475 KEQRPHQLEVHYLVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQGAV 654
++Q PH H+L +QQ Q P H P+ T L H+ + Q +R V
Sbjct: 311 QQQHPHHPPAHHLPLQQQQQQQQPAH--HPLPHTPHHP-LHHTA---LHQQQQRSGSIVV 364
Query: 655 VPPA 666
PPA
Sbjct: 365 APPA 368
>AY787837-1|AAX14633.1| 654|Drosophila melanogaster fork head
transcription factorshort isoform protein.
Length = 654
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 475 KEQRPHQLEVHYLVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQGAV 654
++Q PH H+L +QQ Q P H P+ T L H+ + Q +R V
Sbjct: 311 QQQHPHHPPAHHLPLQQQQQQQQPAH--HPLPHTPHHP-LHHTA---LHQQQQRSGSIVV 364
Query: 655 VPPA 666
PPA
Sbjct: 365 APPA 368
>AE014298-1307|AAF46467.2| 370|Drosophila melanogaster CG15370-PA
protein.
Length = 370
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 550 H*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQ-GAVVPPA 666
H PV E + DD + P H H HHQ GA PA
Sbjct: 181 HTHHPVEEEEVDDDYGYHYPSGGNHHHHHHHQTGAYAEPA 220
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 350 YRGSTF*QCAVRCRPTACSSTPWCS 276
Y GST +C R RPT +S P CS
Sbjct: 499 YPGSTDPECQPRTRPTITTSQPRCS 523
>AE014296-1909|AAF50094.2| 740|Drosophila melanogaster CG11799-PD,
isoform D protein.
Length = 740
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 475 KEQRPHQLEVHYLVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQGAV 654
++Q PH H+L +QQ Q P H P+ T L H+ + Q +R V
Sbjct: 311 QQQHPHHPPAHHLPLQQQQQQQQPAH--HPLPHTPHHP-LHHTA---LHQQQQRSGSIVV 364
Query: 655 VPPA 666
PPA
Sbjct: 365 APPA 368
>AE014296-1908|AAN11901.1| 740|Drosophila melanogaster CG11799-PC,
isoform C protein.
Length = 740
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 475 KEQRPHQLEVHYLVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQGAV 654
++Q PH H+L +QQ Q P H P+ T L H+ + Q +R V
Sbjct: 311 QQQHPHHPPAHHLPLQQQQQQQQPAH--HPLPHTPHHP-LHHTA---LHQQQQRSGSIVV 364
Query: 655 VPPA 666
PPA
Sbjct: 365 APPA 368
>AE014296-1907|AAF50093.2| 740|Drosophila melanogaster CG11799-PB,
isoform B protein.
Length = 740
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 475 KEQRPHQLEVHYLVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQGAV 654
++Q PH H+L +QQ Q P H P+ T L H+ + Q +R V
Sbjct: 311 QQQHPHHPPAHHLPLQQQQQQQQPAH--HPLPHTPHHP-LHHTA---LHQQQQRSGSIVV 364
Query: 655 VPPA 666
PPA
Sbjct: 365 APPA 368
>AE014296-1906|AAF50092.2| 740|Drosophila melanogaster CG11799-PA,
isoform A protein.
Length = 740
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 475 KEQRPHQLEVHYLVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQGAV 654
++Q PH H+L +QQ Q P H P+ T L H+ + Q +R V
Sbjct: 311 QQQHPHHPPAHHLPLQQQQQQQQPAH--HPLPHTPHHP-LHHTA---LHQQQQRSGSIVV 364
Query: 655 VPPA 666
PPA
Sbjct: 365 APPA 368
>AE014296-1905|AAN11900.1| 699|Drosophila melanogaster CG11799-PE,
isoform E protein.
Length = 699
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 475 KEQRPHQLEVHYLVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQGAV 654
++Q PH H+L +QQ Q P H P+ T L H+ + Q +R V
Sbjct: 311 QQQHPHHPPAHHLPLQQQQQQQQPAH--HPLPHTPHHP-LHHTA---LHQQQQRSGSIVV 364
Query: 655 VPPA 666
PPA
Sbjct: 365 APPA 368
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,605,544
Number of Sequences: 53049
Number of extensions: 639546
Number of successful extensions: 3448
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3426
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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