Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3b16
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.0  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.0  
AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    25   2.7  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   4.6  
DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    23   6.1  
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           23   6.1  
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           23   6.1  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 478 TLEGTNPLGSLCPNHVPAVLP 416
           +L GT P G  C  H P  LP
Sbjct: 410 SLSGTGPFGGSCQIHGPIQLP 430


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 478 TLEGTNPLGSLCPNHVPAVLP 416
           +L GT P G  C  H P  LP
Sbjct: 410 SLSGTGPFGGSCQIHGPIQLP 430


>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 169 PLRNGNGVPDNLFNMIQPPRTRTPANSFSENATIDD 276
           P  N NGV  +LF M+          ++ ENA  DD
Sbjct: 603 PKGNANGVEFDLFAMVSRFEDDNANVNYDENAGCDD 638


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 20/99 (20%), Positives = 43/99 (43%)
 Frame = +1

Query: 226  RTRTPANSFSENATIDDIDPASDLGASIRNKCMELEEILQSLKSRLNHVVLDENIVLSPE 405
            R     NS   N   D I+P SDL + + N    L++ L ++++     ++ + +     
Sbjct: 930  RMHALGNSDLANCFSDLINPGSDLTSLLPNSFEALDQSLLTMET--TTTIIRDRVSGYSS 987

Query: 406  ANSMEAQLEHDLDTDCQEDLSLQEFLELLHSQNKINPTG 522
             +  + +L+  ++   ++   LQ   +    Q + N TG
Sbjct: 988  LHESQNRLDRIVEEHQEQREMLQSIQQEYQLQMQSNGTG 1026


>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 222 SSDADTCKFFFGERYDRRHRPCIRSGSFDQKQM 320
           +S ++  KF  G +YD     C+R+   +Q Q+
Sbjct: 210 ASGSNATKFGMGAKYDLDKDACVRAKVNNQSQI 242


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 222 SSDADTCKFFFGERYDRRHRPCIRSGSFDQKQM 320
           +S ++  KF  G +YD     C+R+   +Q Q+
Sbjct: 210 ASGSNATKFGMGAKYDLDKDACVRAKVNNQSQI 242


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 222 SSDADTCKFFFGERYDRRHRPCIRSGSFDQKQM 320
           +S ++  KF  G +YD     C+R+   +Q Q+
Sbjct: 210 ASGSNATKFGMGAKYDLDKDACVRAKVNNQSQI 242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,161
Number of Sequences: 2352
Number of extensions: 10099
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)