Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3b08
(751 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 27 0.82
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 27 0.82
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 25 2.5
AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translati... 24 5.8
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 24 5.8
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 23 7.6
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 23 7.6
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 23 7.6
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 23 7.6
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 26.6 bits (56), Expect = 0.82
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -1
Query: 433 TGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 296
T T +T +PVP C TS T T +S S R S+ P P
Sbjct: 29 TTVTMATASPVPAC-TTTTSTTSTSGASAASSPTRDEMSVVVPISP 73
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 26.6 bits (56), Expect = 0.82
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -1
Query: 433 TGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 296
T T +T +PVP C TS T T +S S R S+ P P
Sbjct: 29 TTVTMATASPVPAC-TTTTSTTSTSGASAASSPTRDEMSVVVPISP 73
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 25.0 bits (52), Expect = 2.5
Identities = 26/112 (23%), Positives = 40/112 (35%)
Frame = -1
Query: 631 TTLPFTDWMGSTTTATARSDNASNDC*VLISTPDNQQPKPGCE*YHPTTISGRPVCFNMS 452
TT TDW+ +TTT + +T P + PT + PV + +
Sbjct: 111 TTTTTTDWITTTTTEATTTTK-------FPTTTTTSAPTTPSQWTDPTITTTTPVWTDPT 163
Query: 451 NILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 296
A T +T S P P T ++T++P+ S P P
Sbjct: 164 TWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPPPPP 215
>AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translation
initiation factor protein.
Length = 348
Score = 23.8 bits (49), Expect = 5.8
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 510 PGFGCWLSGVDINTQQSFEA-LSERAVAVVVDPIQSVKGK 626
PG GCW D+ + ++ER V + + V+ K
Sbjct: 309 PGIGCWNPAFDVTPAELITGIITERGVLKPCELAEKVRQK 348
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 23.8 bits (49), Expect = 5.8
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -2
Query: 615 PTGWDQPQQLLHVPIMLQMTVEC*YPHQITNNQSQ 511
P G+ Q Q H +++ EC P Q Q Q
Sbjct: 156 PRGYQQQQSQSHRQVVIGTQQECLQPEQQHQRQQQ 190
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 7.6
Identities = 25/112 (22%), Positives = 39/112 (34%)
Frame = -1
Query: 631 TTLPFTDWMGSTTTATARSDNASNDC*VLISTPDNQQPKPGCE*YHPTTISGRPVCFNMS 452
TT TDW+ +TTT + +T P + PT + P+ + +
Sbjct: 111 TTTTTTDWITTTTTEATTTT-------TFPTTTTTSAPTTPSQWTDPTITTTTPIWTDPT 163
Query: 451 NILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 296
A T +T S P P T ++T +P+ S P P
Sbjct: 164 TWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPP 215
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 7.6
Identities = 25/112 (22%), Positives = 39/112 (34%)
Frame = -1
Query: 631 TTLPFTDWMGSTTTATARSDNASNDC*VLISTPDNQQPKPGCE*YHPTTISGRPVCFNMS 452
TT TDW+ +TTT + +T P + PT + P+ + +
Sbjct: 111 TTTTTTDWITTTTTEATTTT-------TFPTTTTTSAPTTPSQWTDPTITTTTPIWTDPT 163
Query: 451 NILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 296
A T +T S P P T ++T +P+ S P P
Sbjct: 164 TWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPP 215
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 7.6
Identities = 26/112 (23%), Positives = 40/112 (35%)
Frame = -1
Query: 631 TTLPFTDWMGSTTTATARSDNASNDC*VLISTPDNQQPKPGCE*YHPTTISGRPVCFNMS 452
TT TDW+ +TTT + +T P + PT + P+ + +
Sbjct: 111 TTTTTTDWITTTTTEATTTT-------TFPTTTTTSAPTTPSQWTDPTITTTTPIWTDPT 163
Query: 451 NILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 296
A T +T +D P P T T + ++T S T P P
Sbjct: 164 TWSA-PTTTTTWSDQPPPPTTTTTTVWTDSTATTTTPASTTTTTWSDLPPPP 214
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 23.4 bits (48), Expect = 7.6
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 355 SSTNSPSMRPITSIGTPARPCFSI 284
S +P+++P+ G P RP +S+
Sbjct: 63 SVERNPAIQPVGIFGRPGRPWWSV 86
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 798,723
Number of Sequences: 2352
Number of extensions: 16883
Number of successful extensions: 51
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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