Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3b02
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    26   0.28 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.28 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.28 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   6.0  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      21   8.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.0  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 224 ITLKAPVHGNDKVLCVGLNYKDHCEEQKLTPPELPFI 334
           I L  PV  +  +   G+ Y+D C   +  PP L F+
Sbjct: 166 INLSVPVLLSGLIAMCGMYYRDECSFAESIPPYLFFV 202


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 224 ITLKAPVHGNDKVLCVGLNYKDHCEEQKLTPPELPFI 334
           I L  PV  +  +   G+ Y+D C   +  PP L F+
Sbjct: 399 INLSVPVLLSGLIAMCGMYYRDECSFAESIPPYLFFV 435


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 224 ITLKAPVHGNDKVLCVGLNYKDHCEEQKLTPPELPFI 334
           I L  PV  +  +   G+ Y+D C   +  PP L F+
Sbjct: 399 INLSVPVLLSGLIAMCGMYYRDECSFAESIPPYLFFV 435


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 697 YPQNPGYYCKIIKCY 741
           +P N  YY  + KCY
Sbjct: 33  FPTNQKYYPSLAKCY 47


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 741 ITFDNLAIISGIL 703
           IT DN+A ISG+L
Sbjct: 123 ITTDNVAAISGVL 135


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 367 WSHHSTRKFVEYKRKFWRRQFLLFTVIFVI 278
           WS    R   E K   WR + ++ T++ V+
Sbjct: 2   WSLWKVRGRCEGKDSKWRGEHMVGTIVVVV 31


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 423 SISQTTALLTSIFN-LMVSFGPTTVLGNLLNIKGSSGG 313
           S SQ  A +  + + L +S    T +G L  IKG SGG
Sbjct: 186 SYSQRMARVEEVISDLALSKCQNTPIGILGRIKGISGG 223


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 423 SISQTTALLTSIFN-LMVSFGPTTVLGNLLNIKGSSGG 313
           S SQ  A +  + + L +S    T +G L  IKG SGG
Sbjct: 186 SYSQRMARVEEVISDLALSKCQNTPIGILGRIKGISGG 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,615
Number of Sequences: 336
Number of extensions: 4285
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)