Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3b02
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    26   1.1  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    26   1.1  
Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             25   2.5  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   3.3  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   4.4  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   7.7  

>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = -2

Query: 143 LMVILDLLY*YPQHYRHLR---NPLG-FHRCFCKKTVGVSF 33
           L +I  L Y YP  YR LR   +P G +HR F +   G+ F
Sbjct: 91  LKIITRLYYDYPDQYRALRERWDPSGEYHRRFEEYLRGLQF 131


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = -2

Query: 143 LMVILDLLY*YPQHYRHLR---NPLG-FHRCFCKKTVGVSF 33
           L +I  L Y YP  YR LR   +P G +HR F +   G+ F
Sbjct: 91  LKIITRLYYDYPDQYRALRERWDPSGEYHRRFEEYLRGLQF 131


>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -1

Query: 684 LLFCF*TP-LMLHFTFKF*GFPISSLVTIQGPIGQKVS 574
           L F   TP L+++FT  F   PIS L TI+G +  K +
Sbjct: 78  LWFMAWTPYLVINFTGIFKAAPISPLATIRGSLFAKAN 115


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 402 LLTSIFNLMVSFGPTTVLGNLLNIKGSSGGVNFCSS 295
           LL  IF++   F    V    +NI GS+  VN+ +S
Sbjct: 444 LLMGIFSMYTGFVYNDVFSKGMNIFGSAWSVNYNTS 479


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -1

Query: 402 LLTSIFNLMVSFGPTTVLGNLLNIKGSSGGVNFCSS 295
           LL  +F++   F    +    +NI GS+  VN+ +S
Sbjct: 454 LLMGLFSMYTGFVYNDIFSKSMNIFGSAWSVNYNTS 489


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 47  QFSYKNSDGIRAGFLDGDNVVDINKEDPKLPSTL 148
           Q S+ N+  ++A  LDG+ + DI     KLP+ L
Sbjct: 517 QASFDNNTKLQAIRLDGNYLTDIAGLFTKLPNLL 550


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,305
Number of Sequences: 2352
Number of extensions: 19151
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)