Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3a23
(744 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326,916... 38 0.008
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 38 0.011
10_01_0175 + 1959565-1960431,1960886-1960955,1961537-1961704,196... 34 0.14
06_01_0888 + 6805071-6805485,6806202-6806374,6806501-6806549,680... 34 0.14
04_01_0481 - 6302066-6303118 33 0.24
02_05_0720 - 31213391-31213617,31213724-31213772,31213898-312140... 33 0.24
10_06_0043 - 10026817-10027869 32 0.42
06_03_0705 - 23707987-23708295,23708532-23708573,23709772-237099... 31 0.73
07_03_1332 + 25854171-25854695 31 1.3
02_02_0492 - 10907529-10907629,10907714-10907953,10908035-109080... 30 1.7
02_02_0490 - 10879761-10879861,10879946-10880185,10880274-108803... 30 2.2
01_06_0678 - 31114259-31114321,31114508-31114552,31114644-311147... 30 2.2
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 29 3.9
05_03_0592 + 15909437-15911002 29 3.9
12_02_0463 + 19379222-19379225,19379565-19380322 29 5.2
03_02_0693 - 10441253-10441294,10441404-10441511,10441594-104416... 29 5.2
08_02_0924 - 22660615-22660623,22661035-22661193,22661664-226625... 28 6.8
03_06_0484 + 34233042-34233258,34235317-34237049 28 6.8
11_08_0048 - 28022335-28022520,28022607-28022699,28022804-280228... 28 9.0
03_02_0546 - 9381989-9383733,9385838-9386054 28 9.0
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 28 9.0
01_01_0517 + 3803740-3806106,3806226-3806312,3806397-3807035,380... 28 9.0
>10_05_0101 -
9167383-9167679,9167883-9167961,9168161-9168326,
9169201-9169299,9169969-9171361
Length = 677
Score = 37.9 bits (84), Expect = 0.008
Identities = 45/154 (29%), Positives = 62/154 (40%), Gaps = 7/154 (4%)
Frame = +1
Query: 154 DILSNILVNEKSILGFLSAIFNFLARRTDFYYVPDG---QYENIGFPPGVAEELVIKVLR 324
DIL + NEK LG A F+ L + + +PD Q+ A L I
Sbjct: 129 DILISFRQNEKESLGAAWAKFSLLTQSGPDFSLPDHVLLQHFRYALDKESAANLDISAGE 188
Query: 325 TCDPKNVKEPHKHTDL---NNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVR 495
+ K E + DL N+ S EVE+I E L E D T+E
Sbjct: 189 SFAHKTTAEGRELLDLILENDSFGQSEAIPEVEIIHEEP----LHMESEPDS-TAESSF- 242
Query: 496 EAVSSQPEEYKPPVIPIQKRSECYNG-ADRENYS 594
+ + + EE PP IP+Q R + Y + NYS
Sbjct: 243 QLLQPEEEEIHPPEIPLQFRDDLYKDYGNTLNYS 276
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/94 (24%), Positives = 44/94 (46%)
Frame = +1
Query: 340 NVKEPHKHTDLNNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVREAVSSQPE 519
+ +P D N+ ST +QE E +D + + + + + + +H + E Q E
Sbjct: 658 DASDPDAGFDAENDTELSTSSQEQEE-DEDDGPEEQKDNSDDNKMDEDHVMVENKEEQEE 716
Query: 520 EYKPPVIPIQKRSECYNGADRENYSWAQTLMDLD 621
+ +PP +P Q+ E RE + +T +DL+
Sbjct: 717 QPQPPPLPPQQPVEKMEAPSREIETVGRTFLDLN 750
>10_01_0175 +
1959565-1960431,1960886-1960955,1961537-1961704,
1962570-1962676
Length = 403
Score = 33.9 bits (74), Expect = 0.14
Identities = 43/154 (27%), Positives = 61/154 (39%), Gaps = 7/154 (4%)
Frame = +1
Query: 154 DILSNILVNEKSILGFLSAIFNFLARRTDFYYVPDG---QYENIGFPPGVAEELVIKVLR 324
DI+S NEK LG A F+ L + +PD Q G A L I
Sbjct: 129 DIIS-FRQNEKEYLGVAWARFSLLTQSGPDLSLPDHVLLQQFRYGLDKESAANLDISAEG 187
Query: 325 TCDPKNVKEPHKHTDL---NNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVR 495
+ K E + DL N+ S EV++I + +LE + T+E R
Sbjct: 188 SFAHKTTAEGRELLDLILENDSFGRSEAVPEVKIIYEDPLHEELEPNS-----TAESSFR 242
Query: 496 EAVSSQPEEYKPPVIPIQKRSECYNG-ADRENYS 594
+ + EE PP IP Q + + Y + NYS
Sbjct: 243 -LLEPEEEEIHPPEIPFQFKDDLYEDYGNTLNYS 275
>06_01_0888 +
6805071-6805485,6806202-6806374,6806501-6806549,
6806654-6806820,6806919-6807002,6807097-6807135
Length = 308
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 568 NGADRENYSWAQTLMDLDVTVKLPPDIKS 654
NG D E YSW Q L ++ +TV +P KS
Sbjct: 144 NGLDLEKYSWIQQLPEVTITVPVPQGTKS 172
>04_01_0481 - 6302066-6303118
Length = 350
Score = 33.1 bits (72), Expect = 0.24
Identities = 46/154 (29%), Positives = 58/154 (37%), Gaps = 7/154 (4%)
Frame = +1
Query: 154 DILSNILVNEKSILGFLSAIFNFLARRTDFYYVPDG---QYENIGFPPGVAEELVIKVLR 324
DILS NEK L A F+ L + +PD Q+ G L I
Sbjct: 129 DILS-FRQNEKESLDAAWARFSLLTQSGPDLSLPDHVLLQHFRYGLDKESTANLDISAGG 187
Query: 325 TCDPKNVKEPHKHTDL---NNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVR 495
+ K KE + DL NN S EVEVI + + E S Q+
Sbjct: 188 SFAHKTTKEGRELLDLILENNSFGRSEAILEVEVIHEDPLHVESEPDS---TAKSSFQLL 244
Query: 496 EAVSSQPEEYKPPVIPIQKRSECYNG-ADRENYS 594
E + EE PP IP Q R + Y + NYS
Sbjct: 245 EP---EEEEIHPPEIPFQFRDDLYEDYGNTLNYS 275
>02_05_0720 -
31213391-31213617,31213724-31213772,31213898-31214076,
31215861-31216110
Length = 234
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 568 NGADRENYSWAQTLMDLDVTVKLPPDIKSS 657
NG D E YSW Q ++ +T+ +P KSS
Sbjct: 91 NGLDLEKYSWTQERPEVTITIPVPQGTKSS 120
>10_06_0043 - 10026817-10027869
Length = 350
Score = 32.3 bits (70), Expect = 0.42
Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Frame = +1
Query: 154 DILSNILVNEKSILGFLSAIFNFLARRTDFYYVPDG---QYENIGFPPGVAEELVIKVLR 324
DILS NEK LG A F+ L + +PD Q+ G A L I
Sbjct: 129 DILS-FRQNEKESLGAAWARFSLLTQSGPNLCLPDHVLLQHFRYGLDKESATNLDIFAGG 187
Query: 325 TCDPKNVKEPHKHTDL---NNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVR 495
+ K E + DL N+ S E+E+I + +E+ + V +S
Sbjct: 188 SFAHKTTAEGKELLDLILENDSFGQSEACPEIEII--HEYPLHVESEPDSTVESSF---- 241
Query: 496 EAVSSQPEEYKPPVIPIQKRSECY-NGADRENYS 594
+++ + EE PP IP Q R + Y N + NYS
Sbjct: 242 QSLEPEEEEIHPPKIPFQFRGDLYENYENTLNYS 275
>06_03_0705 -
23707987-23708295,23708532-23708573,23709772-23709957,
23710112-23710222,23710337-23710408,23710499-23710747,
23711052-23711135,23711271-23711456,23711540-23711764
Length = 487
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 430 DTSADLEASGEQDVLTSEHQVREAVSSQPEEYKPPV 537
D AD SGE +V+ +V +SQPE+ KP V
Sbjct: 38 DVQADGAHSGESEVINPAEEVGGEATSQPEDVKPRV 73
>07_03_1332 + 25854171-25854695
Length = 174
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 250 VPDGQYENIGFP-PGVAEELVIKVLRTCDPKNVKEPH 357
V DG + GFP P V + + +V++ CD KEPH
Sbjct: 52 VDDGGCVDKGFPLPNVDSKTLARVIQYCDEHGNKEPH 88
>02_02_0492 -
10907529-10907629,10907714-10907953,10908035-10908098,
10908416-10908721,10909347-10909561,10909656-10909950,
10910493-10910597,10911112-10911180,10911433-10911519,
10911953-10913704,10914964-10915054,10915217-10915488
Length = 1198
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -3
Query: 538 LLEACTLQADSKLLPLLDVQMLGHLVLHLPRGPPKYLH*QLLRPLEQ 398
+LEAC L+ D ++LPL D ++G ++L G + + Q+ R L Q
Sbjct: 637 VLEACCLKKDMEILPLGDQTIIGERGINLSGGQKQRM--QIARALYQ 681
>02_02_0490 -
10879761-10879861,10879946-10880185,10880274-10880337,
10880426-10880731,10881098-10881312,10881417-10881711,
10882193-10882357,10882477-10882527,10882657-10883109,
10883195-10883281,10883736-10884800,10884858-10885376
Length = 1186
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -3
Query: 538 LLEACTLQADSKLLPLLDVQMLGHLVLHLPRGPPKYLH*QLLRPLEQ 398
+LEAC L+ D ++LPL D ++G ++L G + + Q+ R L Q
Sbjct: 460 VLEACCLKKDLEILPLGDQTIIGERGINLSGGQKQRI--QIARALYQ 504
>01_06_0678 -
31114259-31114321,31114508-31114552,31114644-31114742,
31114827-31114872,31115026-31115102,31115385-31115432,
31120640-31120708,31120848-31120853,31120955-31121032,
31121246-31121344,31121427-31121489,31122642-31122713,
31122800-31122874,31122965-31123021,31123983-31124186,
31124317-31124394,31124485-31124547,31124646-31125284,
31125367-31125416,31125496-31125576,31125896-31125923
Length = 679
Score = 29.9 bits (64), Expect = 2.2
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +1
Query: 346 KEPHKHTDLNNEIMCSTVAQEVEVIASEDTSAD--LEASGEQDVLTSEHQVREAVSSQPE 519
KE D N+I V EVEV ++E ++ D + G D SE + S P+
Sbjct: 124 KEEKVVVDRKNDIGAEVVDTEVEVQSTERSAEDAAIVVDGAADSGNSEGAAESSAPSVPD 183
Query: 520 EYKPPVIPIQKRSECYNGADRENYSWAQTLMDLDVTVKLPPDIKSS 657
E P I Q +E + + E A ++ + +K PD + S
Sbjct: 184 ERCEPSISNQD-AEIVSAVNLEEKDSAMEVIH-EKNIKEVPDTQVS 227
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 574 LHCSTRFSSVLVLLEACTLQADSKLLPLLDVQMLGHLVLHLPRGPPKYLH 425
L C++ ++ +L AC ++A L PL HL+ H+PR P LH
Sbjct: 274 LRCTSPSLALALLRAACRVRASPCLRPLAH-----HLLDHIPRPHPHLLH 318
>05_03_0592 + 15909437-15911002
Length = 521
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 457 GEQDVLTSEHQVREAVSSQPEEYKPPVIPIQKRSEC 564
G++ L Q RE SQ EE +PP+ P+ +EC
Sbjct: 485 GDESPLLQRQQGRE---SQAEEMRPPLQPLMTEAEC 517
>12_02_0463 + 19379222-19379225,19379565-19380322
Length = 253
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 352 PHKHTDLNNEIMCSTVAQEVEVIASEDTSADLEA--SGEQDVLTSEHQVREAVSSQPEEY 525
P D +I+ + QE V A ED A +EA +GE+D++ ++ +AV + EY
Sbjct: 86 PTLAADERLDILYNRTLQEETVGAVEDAVASMEAQVAGERDIVDAKKLRLKAVRAAVAEY 145
Query: 526 K 528
+
Sbjct: 146 R 146
>03_02_0693 -
10441253-10441294,10441404-10441511,10441594-10441677,
10441765-10443062,10443111-10444804,10444890-10444957,
10445057-10445186,10445292-10445415,10445551-10445711,
10446714-10446868
Length = 1287
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 589 NFLCPLHCSTRFSSVLVLLEACTLQADSKLLPLLDVQMLG 470
N C LH T F+ L + +C ++ ++ LPL M+G
Sbjct: 803 NEQCCLHPETSFAQDLTHVSSCEVEGQNEPLPLCSSSMVG 842
>08_02_0924 -
22660615-22660623,22661035-22661193,22661664-22662539,
22663009-22663119,22663528-22663556,22663690-22663762,
22664804-22665100,22665193-22665345,22665979-22666068,
22667520-22667809,22667860-22668349
Length = 858
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 505 KLLPLLDVQMLGHLVLHLPRGPPKYLH--*QLLRPLEQL 395
++ PLL V+ L HL+L P P ++ H L+RP Q+
Sbjct: 576 RVAPLLGVRPLPHLLLATPHAPRRHQHRPPALIRPRPQV 614
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Frame = +1
Query: 394 TVAQEVEVIASEDTSADLEASGEQDVLT--------SEHQVREAVSSQPEEYKPPVIPIQ 549
TV +++ + SA+ + +G+++ +T S+ ++ + V E+YK +
Sbjct: 482 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQDA-EKYKSEDEEHK 540
Query: 550 KRSECYNGADRENYSWAQTLMDLDVTVKLPPDIK 651
K+ + N + Y+ T+ D + KLP D K
Sbjct: 541 KKVDAKNSLENYAYNMRNTIQDEKIASKLPADDK 574
>11_08_0048 -
28022335-28022520,28022607-28022699,28022804-28022882,
28022951-28023061,28023133-28023390,28023468-28023970,
28024094-28024729,28024778-28025116
Length = 734
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 418 IASEDTSADLEASGEQDVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECY--NGADRENY 591
+AS T D E EQ ++ + + + SQPEE K +P+ R+ + A ++ Y
Sbjct: 312 VASPPTEKDAE---EQSLVPDQPEPSQLEPSQPEELKGADVPVMVRTHTHKAKSASKKKY 368
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 496 EAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDLDVTVKLPPDIK 651
E + + E+YK ++ + E N + Y+ T+ D + KLP D K
Sbjct: 523 ERMVQEAEKYKAEDEQVRHKVEARNALENYAYNMRNTVRDEKIASKLPADDK 574
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 27.9 bits (59), Expect = 9.0
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Frame = +1
Query: 370 LNNEIMCSTVAQEVEVIASEDTSADLEAS-GEQDVLTSEHQVREAVSSQPEEYKPPVIPI 546
+ ++I CS +A E +A + T DL+ + ++ Q+++ PE + P IP
Sbjct: 76 ITSKIWCSDLAPEDVPLAMDSTLKDLQLDYVDLYLIHWPFQIKKGTELSPENFVKPDIPS 135
Query: 547 QKRS--ECY-NGADR----ENYSWAQTLMDLDVTVKLPPDI 648
R+ + Y +G R N+S ++ L DL ++PP +
Sbjct: 136 TWRAMEQLYDSGKARAIGVSNFS-SKKLGDLLCVARVPPAV 175
>01_01_0517 +
3803740-3806106,3806226-3806312,3806397-3807035,
3807118-3807282,3807363-3807657,3807739-3807953,
3808125-3808430,3808539-3808602,3808735-3808974,
3809150-3809253
Length = 1493
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -3
Query: 538 LLEACTLQADSKLLPLLDVQMLGHLVLHLPRGPPKYLH*QLLRPLEQ 398
+LE+C+L+ D ++LP D ++G ++L G + + Q+ R L Q
Sbjct: 721 VLESCSLKKDLEILPFGDQTVIGERGINLSGGQKQRI--QIARALYQ 765
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,571,099
Number of Sequences: 37544
Number of extensions: 378809
Number of successful extensions: 1071
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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