Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3a23
         (744 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    26   1.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.3  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   10.0 

>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 568 CSTRFSSVLVLLEACTLQADSKLLPLLDVQMLGHLVLHLP 449
           C      +L L    TLQ++++L   L ++ LGH   HLP
Sbjct: 252 CEAAPMLLLQLYVLVTLQSEAQLAAALKLKTLGHHHHHLP 291


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 104 KEYCKKCHPRTNLANTTIFYQIF 172
           K  C+KCHPR        F++ F
Sbjct: 633 KAVCRKCHPRCKKCTGYGFHEQF 655


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +1

Query: 121  MSSANEFSQYDDILSNILVNEKSILGFLSAIFNFLARRTD 240
            MSS     + +D+L  +LV   + +GF   IF     R +
Sbjct: 1010 MSSIVHRQEIEDMLPLLLVATCAFVGFFGLIFGIFCYRKE 1049


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,362
Number of Sequences: 2352
Number of extensions: 15606
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)