Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3a23
(744 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035014-1|AAH35014.1| 361|Homo sapiens NudC domain containing ... 90 9e-18
AB028991-1|BAA83020.1| 354|Homo sapiens KIAA1068 protein protein. 88 4e-17
BC011673-1|AAH11673.1| 220|Homo sapiens NUDCD3 protein protein. 56 1e-07
BC003691-1|AAH03691.1| 220|Homo sapiens NudC domain containing ... 56 1e-07
AK024226-1|BAB14855.1| 256|Homo sapiens protein ( Homo sapiens ... 56 1e-07
AC004453-1|AAQ96892.1| 220|Homo sapiens unknown protein. 56 1e-07
BC021139-1|AAH21139.1| 331|Homo sapiens nuclear distribution ge... 40 0.007
BC015153-1|AAH15153.1| 331|Homo sapiens nuclear distribution ge... 40 0.007
BC007280-1|AAH07280.1| 331|Homo sapiens nuclear distribution ge... 40 0.007
BC006147-1|AAH06147.1| 331|Homo sapiens nuclear distribution ge... 40 0.007
BC003132-1|AAH03132.1| 331|Homo sapiens nuclear distribution ge... 40 0.007
BC002399-1|AAH02399.1| 331|Homo sapiens nuclear distribution ge... 40 0.007
AL356390-7|CAI13561.1| 331|Homo sapiens nuclear distribution ge... 40 0.007
AF130736-1|AAD30517.1| 331|Homo sapiens nuclear distribution pr... 40 0.007
AF125465-1|AAD39921.1| 331|Homo sapiens nuclear distribution pr... 40 0.007
AF100760-1|AAD43024.1| 331|Homo sapiens MNUDC protein protein. 40 0.007
AF086922-1|AAP97152.1| 331|Homo sapiens SIG-92 protein. 40 0.007
AL356390-9|CAI13563.1| 209|Homo sapiens nuclear distribution ge... 37 0.067
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 36 0.15
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 36 0.15
AF241788-1|AAG44476.1| 211|Homo sapiens NPD011 protein. 35 0.35
BC043406-1|AAH43406.1| 583|Homo sapiens NudC domain containing ... 31 4.4
BC031258-1|AAH31258.1| 496|Homo sapiens NUDCD1 protein protein. 31 4.4
BC000967-1|AAH00967.2| 583|Homo sapiens NudC domain containing ... 31 4.4
AL832317-1|CAD38612.1| 389|Homo sapiens hypothetical protein pr... 31 4.4
AL356390-6|CAI13560.1| 133|Homo sapiens nuclear distribution ge... 31 4.4
AK027897-1|BAB55439.1| 583|Homo sapiens protein ( Homo sapiens ... 31 4.4
AF521133-1|AAQ08823.1| 554|Homo sapiens tumor antigen CML66 sho... 31 4.4
AF390562-1|AAN40840.1| 1826|Homo sapiens TBP-associated factor R... 31 4.4
AF283302-1|AAM69373.1| 554|Homo sapiens chronic myelogenous leu... 31 4.4
AF283301-1|AAK73017.1| 583|Homo sapiens chronic myelogenous leu... 31 4.4
X07024-1|CAA30073.1| 1554|Homo sapiens CCG1 protein protein. 31 5.8
D90359-1|BAA14374.1| 1872|Homo sapiens CCG1 protein protein. 31 5.8
AY623109-1|AAT38105.1| 1893|Homo sapiens TAF1 RNA polymerase II,... 31 5.8
AM711895-1|CAM98558.1| 194|Homo sapiens dystonia 3 (with Parkin... 31 5.8
AM711894-1|CAM98557.1| 182|Homo sapiens dystonia 3 (with Parkin... 31 5.8
AM711893-1|CAM98556.1| 491|Homo sapiens dystonia 3 (with Parkin... 31 5.8
AM711892-1|CAM98555.1| 246|Homo sapiens dystonia 3 (with Parkin... 31 5.8
AJ555149-1|CAD87528.2| 246|Homo sapiens putative DYT3 protein p... 31 5.8
AJ555148-1|CAD87527.2| 457|Homo sapiens putative DYT3 protein p... 31 5.8
AJ549250-1|CAD70493.3| 455|Homo sapiens putative DYT3 protein p... 31 5.8
AJ549248-1|CAD70491.3| 489|Homo sapiens putative DYT3 protein p... 31 5.8
AB209316-1|BAD92553.1| 1070|Homo sapiens TBP-associated factor 1... 31 5.8
>BC035014-1|AAH35014.1| 361|Homo sapiens NudC domain containing 3
protein.
Length = 361
Score = 89.8 bits (213), Expect = 9e-18
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 36/234 (15%)
Frame = +1
Query: 148 YDDILSNILVNEKSILGFLSAIFNFLARRTDFYYVPDGQYENIGFPPGVAEELVIKVLRT 327
YD L IL + ++ FL +F FL R+TDFY + + +GFPPG A+ LV++V +T
Sbjct: 9 YDQALLGILQHVGNVQDFLRVLFGFLYRKTDFYRLLRHPSDRMGFPPGAAQALVLQVFKT 68
Query: 328 CDPKNVKEPHKHT-DLNNEIMCSTV--AQEVEVIASE-------------DTSADLEASG 459
D ++ K +L +I A+ V A+E D++ +L+
Sbjct: 69 FDHMARQDDEKRRQELEEKIRRKEEEEAKTVSAAAAEKEPVPVPVQEIEIDSTTELDGHQ 128
Query: 460 EQDVLTSEHQVRE-AVSSQPEEY------------KPPVIP-----IQKRSECYNGADRE 585
E + + V+E A SQ E +PP++P QK + YNGA RE
Sbjct: 129 EVEKVQPPGPVKEMAHGSQEAEAPGAVAGAAEVPREPPILPRIQEQFQKNPDSYNGAVRE 188
Query: 586 NYSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGDIYVC--RQNGDVIVKDSLL 741
NY+W+Q DL+V V LP + K + VA++ I V +NG+ ++ + L
Sbjct: 189 NYTWSQDYTDLEVRVPLPKHVVKGKQVSVALSSSSIRVAMLEENGECVLMEGKL 242
>AB028991-1|BAA83020.1| 354|Homo sapiens KIAA1068 protein protein.
Length = 354
Score = 87.8 bits (208), Expect = 4e-17
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 36/234 (15%)
Frame = +1
Query: 148 YDDILSNILVNEKSILGFLSAIFNFLARRTDFYYVPDGQYENIGFPPGVAEELVIKVLRT 327
YD L IL + ++ FL +F FL R+TDFY + + +GFPPG A+ LV++V +T
Sbjct: 2 YDQALLGILQHVGNVQDFLRVLFGFLYRKTDFYRLLRHPSDRMGFPPGAAQALVLQVFKT 61
Query: 328 CDPKNVKEPHKHT-DLNNEIMCSTV--AQEVEVIASE-------------DTSADLEASG 459
D ++ K +L +I A+ V A+E D++ +L+
Sbjct: 62 FDHMARQDDEKRRQELEEKIRRKEEEEAKTVSAAAAEKEPVPVPVQEIEIDSTTELDGHQ 121
Query: 460 EQDVLTSEHQVRE-AVSSQPEEY------------KPPVIP-----IQKRSECYNGADRE 585
E + + V+E A SQ E +PP++P QK + YNGA RE
Sbjct: 122 EVEKVQPPGPVKEMAHGSQEAEAPGAVAGAAEVPREPPILPRIQEQFQKNPDSYNGAVRE 181
Query: 586 NYSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGDIYVC--RQNGDVIVKDSLL 741
NY+W+Q DL+V V +P + K + VA++ I V +NG+ ++ + L
Sbjct: 182 NYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKL 235
>BC011673-1|AAH11673.1| 220|Homo sapiens NUDCD3 protein protein.
Length = 220
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Frame = +1
Query: 526 KPPVIP-----IQKRSECYNGADRENYSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGD 690
+PP++P QK + YNGA RENY+W+Q DL+V V +P + K + VA++
Sbjct: 23 EPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSS 82
Query: 691 IYVC--RQNGDVIVKDSLL 741
I V +NG+ ++ + L
Sbjct: 83 IRVAMLEENGERVLMEGKL 101
>BC003691-1|AAH03691.1| 220|Homo sapiens NudC domain containing 3
protein.
Length = 220
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Frame = +1
Query: 526 KPPVIP-----IQKRSECYNGADRENYSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGD 690
+PP++P QK + YNGA RENY+W+Q DL+V V +P + K + VA++
Sbjct: 23 EPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSS 82
Query: 691 IYVC--RQNGDVIVKDSLL 741
I V +NG+ ++ + L
Sbjct: 83 IRVAMLEENGERVLMEGKL 101
>AK024226-1|BAB14855.1| 256|Homo sapiens protein ( Homo sapiens
cDNA FLJ14164 fis, clone NT2RP1000460, weakly similar to
NUCLEAR MOVEMENT PROTEIN NUDC. ).
Length = 256
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Frame = +1
Query: 526 KPPVIP-----IQKRSECYNGADRENYSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGD 690
+PP++P QK + YNGA RENY+W+Q DL+V V +P + K + VA++
Sbjct: 23 EPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSS 82
Query: 691 IYVC--RQNGDVIVKDSLL 741
I V +NG+ ++ + L
Sbjct: 83 IRVAMLEENGERVLMEGKL 101
>AC004453-1|AAQ96892.1| 220|Homo sapiens unknown protein.
Length = 220
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Frame = +1
Query: 526 KPPVIP-----IQKRSECYNGADRENYSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGD 690
+PP++P QK + YNGA RENY+W+Q DL+V V +P + K + VA++
Sbjct: 23 EPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSS 82
Query: 691 IYVC--RQNGDVIVKDSLL 741
I V +NG+ ++ + L
Sbjct: 83 IRVAMLEENGERVLMEGKL 101
>BC021139-1|AAH21139.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.007
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Frame = +1
Query: 121 MSSANEFSQYDD-ILSNILVNEKSILGFLSAIFNFLARRTDFYYV-PDGQYENIGFPP-G 291
M E ++D +L+ +E + ++ F+FL R+TDF+ +G E +
Sbjct: 1 MGGEQEEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFS 60
Query: 292 VAEELVIKVLRTCDPKNVKEPHKHTD----LNNEIMCSTVAQEVEVIASEDTSA-DLEAS 456
+L K R + E + + L E T +++ + E+ LE
Sbjct: 61 HHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEID 120
Query: 457 GEQDVLTSEHQVREAVSSQP-------EEYKPPVIPIQKRSECYNGADRENYSWAQTLMD 615
++D E Q++ P +E + + + NGAD NY W QTL +
Sbjct: 121 QKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSE 180
Query: 616 LDVTVKLPPDIK-SSKDLKVAINPGDIYVCRQNGDVIVKDSL 738
LD+ V + + KD+ V I + V + I+ L
Sbjct: 181 LDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 222
>BC015153-1|AAH15153.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.007
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Frame = +1
Query: 121 MSSANEFSQYDD-ILSNILVNEKSILGFLSAIFNFLARRTDFYYV-PDGQYENIGFPP-G 291
M E ++D +L+ +E + ++ F+FL R+TDF+ +G E +
Sbjct: 1 MGGEQEEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFS 60
Query: 292 VAEELVIKVLRTCDPKNVKEPHKHTD----LNNEIMCSTVAQEVEVIASEDTSA-DLEAS 456
+L K R + E + + L E T +++ + E+ LE
Sbjct: 61 HHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEID 120
Query: 457 GEQDVLTSEHQVREAVSSQP-------EEYKPPVIPIQKRSECYNGADRENYSWAQTLMD 615
++D E Q++ P +E + + + NGAD NY W QTL +
Sbjct: 121 QKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSE 180
Query: 616 LDVTVKLPPDIK-SSKDLKVAINPGDIYVCRQNGDVIVKDSL 738
LD+ V + + KD+ V I + V + I+ L
Sbjct: 181 LDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 222
>BC007280-1|AAH07280.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.007
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Frame = +1
Query: 121 MSSANEFSQYDD-ILSNILVNEKSILGFLSAIFNFLARRTDFYYV-PDGQYENIGFPP-G 291
M E ++D +L+ +E + ++ F+FL R+TDF+ +G E +
Sbjct: 1 MGGEQEEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFS 60
Query: 292 VAEELVIKVLRTCDPKNVKEPHKHTD----LNNEIMCSTVAQEVEVIASEDTSA-DLEAS 456
+L K R + E + + L E T +++ + E+ LE
Sbjct: 61 HHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEID 120
Query: 457 GEQDVLTSEHQVREAVSSQP-------EEYKPPVIPIQKRSECYNGADRENYSWAQTLMD 615
++D E Q++ P +E + + + NGAD NY W QTL +
Sbjct: 121 QKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSE 180
Query: 616 LDVTVKLPPDIK-SSKDLKVAINPGDIYVCRQNGDVIVKDSL 738
LD+ V + + KD+ V I + V + I+ L
Sbjct: 181 LDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 222
>BC006147-1|AAH06147.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.007
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Frame = +1
Query: 121 MSSANEFSQYDD-ILSNILVNEKSILGFLSAIFNFLARRTDFYYV-PDGQYENIGFPP-G 291
M E ++D +L+ +E + ++ F+FL R+TDF+ +G E +
Sbjct: 1 MGGEQEEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFS 60
Query: 292 VAEELVIKVLRTCDPKNVKEPHKHTD----LNNEIMCSTVAQEVEVIASEDTSA-DLEAS 456
+L K R + E + + L E T +++ + E+ LE
Sbjct: 61 HHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEID 120
Query: 457 GEQDVLTSEHQVREAVSSQP-------EEYKPPVIPIQKRSECYNGADRENYSWAQTLMD 615
++D E Q++ P +E + + + NGAD NY W QTL +
Sbjct: 121 QKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSE 180
Query: 616 LDVTVKLPPDIK-SSKDLKVAINPGDIYVCRQNGDVIVKDSL 738
LD+ V + + KD+ V I + V + I+ L
Sbjct: 181 LDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 222
>BC003132-1|AAH03132.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.007
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Frame = +1
Query: 121 MSSANEFSQYDD-ILSNILVNEKSILGFLSAIFNFLARRTDFYYV-PDGQYENIGFPP-G 291
M E ++D +L+ +E + ++ F+FL R+TDF+ +G E +
Sbjct: 1 MGGEQEEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFS 60
Query: 292 VAEELVIKVLRTCDPKNVKEPHKHTD----LNNEIMCSTVAQEVEVIASEDTSA-DLEAS 456
+L K R + E + + L E T +++ + E+ LE
Sbjct: 61 HHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEID 120
Query: 457 GEQDVLTSEHQVREAVSSQP-------EEYKPPVIPIQKRSECYNGADRENYSWAQTLMD 615
++D E Q++ P +E + + + NGAD NY W QTL +
Sbjct: 121 QKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSE 180
Query: 616 LDVTVKLPPDIK-SSKDLKVAINPGDIYVCRQNGDVIVKDSL 738
LD+ V + + KD+ V I + V + I+ L
Sbjct: 181 LDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 222
>BC002399-1|AAH02399.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.007
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Frame = +1
Query: 121 MSSANEFSQYDD-ILSNILVNEKSILGFLSAIFNFLARRTDFYYV-PDGQYENIGFPP-G 291
M E ++D +L+ +E + ++ F+FL R+TDF+ +G E +
Sbjct: 1 MGGEQEEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFS 60
Query: 292 VAEELVIKVLRTCDPKNVKEPHKHTD----LNNEIMCSTVAQEVEVIASEDTSA-DLEAS 456
+L K R + E + + L E T +++ + E+ LE
Sbjct: 61 HHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEID 120
Query: 457 GEQDVLTSEHQVREAVSSQP-------EEYKPPVIPIQKRSECYNGADRENYSWAQTLMD 615
++D E Q++ P +E + + + NGAD NY W QTL +
Sbjct: 121 QKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSE 180
Query: 616 LDVTVKLPPDIK-SSKDLKVAINPGDIYVCRQNGDVIVKDSL 738
LD+ V + + KD+ V I + V + I+ L
Sbjct: 181 LDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 222
>AL356390-7|CAI13561.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.007
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Frame = +1
Query: 121 MSSANEFSQYDD-ILSNILVNEKSILGFLSAIFNFLARRTDFYYV-PDGQYENIGFPP-G 291
M E ++D +L+ +E + ++ F+FL R+TDF+ +G E +
Sbjct: 1 MGGEQEEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFS 60
Query: 292 VAEELVIKVLRTCDPKNVKEPHKHTD----LNNEIMCSTVAQEVEVIASEDTSA-DLEAS 456
+L K R + E + + L E T +++ + E+ LE
Sbjct: 61 HHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEID 120
Query: 457 GEQDVLTSEHQVREAVSSQP-------EEYKPPVIPIQKRSECYNGADRENYSWAQTLMD 615
++D E Q++ P +E + + + NGAD NY W QTL +
Sbjct: 121 QKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSE 180
Query: 616 LDVTVKLPPDIK-SSKDLKVAINPGDIYVCRQNGDVIVKDSL 738
LD+ V + + KD+ V I + V + I+ L
Sbjct: 181 LDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 222
>AF130736-1|AAD30517.1| 331|Homo sapiens nuclear distribution
protein C homolog protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.007
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Frame = +1
Query: 121 MSSANEFSQYDD-ILSNILVNEKSILGFLSAIFNFLARRTDFYYV-PDGQYENIGFPP-G 291
M E ++D +L+ +E + ++ F+FL R+TDF+ +G E +
Sbjct: 1 MGGEQEEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFS 60
Query: 292 VAEELVIKVLRTCDPKNVKEPHKHTD----LNNEIMCSTVAQEVEVIASEDTSA-DLEAS 456
+L K R + E + + L E T +++ + E+ LE
Sbjct: 61 HHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEID 120
Query: 457 GEQDVLTSEHQVREAVSSQP-------EEYKPPVIPIQKRSECYNGADRENYSWAQTLMD 615
++D E Q++ P +E + + + NGAD NY W QTL +
Sbjct: 121 QKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSE 180
Query: 616 LDVTVKLPPDIK-SSKDLKVAINPGDIYVCRQNGDVIVKDSL 738
LD+ V + + KD+ V I + V + I+ L
Sbjct: 181 LDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 222
>AF125465-1|AAD39921.1| 331|Homo sapiens nuclear distribution
protein protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.007
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Frame = +1
Query: 121 MSSANEFSQYDD-ILSNILVNEKSILGFLSAIFNFLARRTDFYYV-PDGQYENIGFPP-G 291
M E ++D +L+ +E + ++ F+FL R+TDF+ +G E +
Sbjct: 1 MGGEQEEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFS 60
Query: 292 VAEELVIKVLRTCDPKNVKEPHKHTD----LNNEIMCSTVAQEVEVIASEDTSA-DLEAS 456
+L K R + E + + L E T +++ + E+ LE
Sbjct: 61 HHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEID 120
Query: 457 GEQDVLTSEHQVREAVSSQP-------EEYKPPVIPIQKRSECYNGADRENYSWAQTLMD 615
++D E Q++ P +E + + + NGAD NY W QTL +
Sbjct: 121 QKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSE 180
Query: 616 LDVTVKLPPDIK-SSKDLKVAINPGDIYVCRQNGDVIVKDSL 738
LD+ V + + KD+ V I + V + I+ L
Sbjct: 181 LDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 222
>AF100760-1|AAD43024.1| 331|Homo sapiens MNUDC protein protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.007
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Frame = +1
Query: 121 MSSANEFSQYDD-ILSNILVNEKSILGFLSAIFNFLARRTDFYYV-PDGQYENIGFPP-G 291
M E ++D +L+ +E + ++ F+FL R+TDF+ +G E +
Sbjct: 1 MGGEQEEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFS 60
Query: 292 VAEELVIKVLRTCDPKNVKEPHKHTD----LNNEIMCSTVAQEVEVIASEDTSA-DLEAS 456
+L K R + E + + L E T +++ + E+ LE
Sbjct: 61 HHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEID 120
Query: 457 GEQDVLTSEHQVREAVSSQP-------EEYKPPVIPIQKRSECYNGADRENYSWAQTLMD 615
++D E Q++ P +E + + + NGAD NY W QTL +
Sbjct: 121 QKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSE 180
Query: 616 LDVTVKLPPDIK-SSKDLKVAINPGDIYVCRQNGDVIVKDSL 738
LD+ V + + KD+ V I + V + I+ L
Sbjct: 181 LDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 222
>AF086922-1|AAP97152.1| 331|Homo sapiens SIG-92 protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.007
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Frame = +1
Query: 121 MSSANEFSQYDD-ILSNILVNEKSILGFLSAIFNFLARRTDFYYV-PDGQYENIGFPP-G 291
M E ++D +L+ +E + ++ F+FL R+TDF+ +G E +
Sbjct: 1 MGGEQEEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTFS 60
Query: 292 VAEELVIKVLRTCDPKNVKEPHKHTD----LNNEIMCSTVAQEVEVIASEDTSA-DLEAS 456
+L K R + E + + L E T +++ + E+ LE
Sbjct: 61 HHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEID 120
Query: 457 GEQDVLTSEHQVREAVSSQP-------EEYKPPVIPIQKRSECYNGADRENYSWAQTLMD 615
++D E Q++ P +E + + + NGAD NY W QTL +
Sbjct: 121 QKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSE 180
Query: 616 LDVTVKLPPDIK-SSKDLKVAINPGDIYVCRQNGDVIVKDSL 738
LD+ V + + KD+ V I + V + I+ L
Sbjct: 181 LDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 222
>AL356390-9|CAI13563.1| 209|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 209
Score = 37.1 bits (82), Expect = 0.067
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 15/174 (8%)
Frame = +1
Query: 202 LSAIFNFLARRTDFYYV-PDGQYENIGFPP-GVAEELVIKVLRTCDPKNVKEPHKHTD-- 369
++ F+FL R+TDF+ +G E + +L K R + E + +
Sbjct: 33 VNTFFSFLRRKTDFFIGGEEGMAEKLITQTFSHHNQLAQKTRREKRARQEAERREKAERA 92
Query: 370 --LNNEIMCSTVAQEVEVIASEDTSA-DLEASGEQDVLTSEHQVREAVSSQP-------E 519
L E T +++ + E+ LE ++D E Q++ P +
Sbjct: 93 ARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKDAENHEAQLKNGSLDSPGKQDTEED 152
Query: 520 EYKPPVIPIQKRSECYNGADRENYSWAQTLMDLDVTVKLPPDIK-SSKDLKVAI 678
E + + + NGAD NY W QTL +LD+ V + + KD+ V I
Sbjct: 153 EEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDI 206
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 35.9 bits (79), Expect = 0.15
Identities = 22/90 (24%), Positives = 41/90 (45%)
Frame = +1
Query: 271 NIGFPPGVAEELVIKVLRTCDPKNVKEPHKHTDLNNEIMCSTVAQEVEVIASEDTSADLE 450
NI PG +E V R DP+ ++EP + + +C+T + E+ + D
Sbjct: 3106 NIDVAPGAPQEKN-GVHRKSDPEELREPQQSFSEAQQQLCNTRQEVNELRKLLEEERDQR 3164
Query: 451 ASGEQDVLTSEHQVREAVSSQPEEYKPPVI 540
+ E + +E Q+R S+ + + P+I
Sbjct: 3165 VAAENALSVAEEQIRRLEHSEWDSSRTPII 3194
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
Length = 3225
Score = 35.9 bits (79), Expect = 0.15
Identities = 22/90 (24%), Positives = 41/90 (45%)
Frame = +1
Query: 271 NIGFPPGVAEELVIKVLRTCDPKNVKEPHKHTDLNNEIMCSTVAQEVEVIASEDTSADLE 450
NI PG +E V R DP+ ++EP + + +C+T + E+ + D
Sbjct: 3072 NIDVAPGAPQEKN-GVHRKSDPEELREPQQSFSEAQQQLCNTRQEVNELRKLLEEERDQR 3130
Query: 451 ASGEQDVLTSEHQVREAVSSQPEEYKPPVI 540
+ E + +E Q+R S+ + + P+I
Sbjct: 3131 VAAENALSVAEEQIRRLEHSEWDSSRTPII 3160
>AF241788-1|AAG44476.1| 211|Homo sapiens NPD011 protein.
Length = 211
Score = 34.7 bits (76), Expect = 0.35
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 568 NGADRENYSWAQTLMDLDVTVKLPPDIK-SSKDLKVAINPGDIYVCRQNGDVIVKDSL 738
NGAD NY W QTL +LD+ V + + KD+ V I + V + I+ L
Sbjct: 116 NGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 173
>BC043406-1|AAH43406.1| 583|Homo sapiens NudC domain containing 1
protein.
Length = 583
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 589 YSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGDIYV 699
Y W QT DL VT++LP D + +D+++ P I +
Sbjct: 278 YYWQQTEDDLTVTIRLPED-STKEDIQIQFLPDHINI 313
>BC031258-1|AAH31258.1| 496|Homo sapiens NUDCD1 protein protein.
Length = 496
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 589 YSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGDIYV 699
Y W QT DL VT++LP D + +D+++ P I +
Sbjct: 191 YYWQQTEDDLTVTIRLPED-STKEDIQIQFLPDHINI 226
>BC000967-1|AAH00967.2| 583|Homo sapiens NudC domain containing 1
protein.
Length = 583
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 589 YSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGDIYV 699
Y W QT DL VT++LP D + +D+++ P I +
Sbjct: 278 YYWQQTEDDLTVTIRLPED-STKEDIQIQFLPDHINI 313
>AL832317-1|CAD38612.1| 389|Homo sapiens hypothetical protein
protein.
Length = 389
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 589 YSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGDIYV 699
Y W QT DL VT++LP D + +D+++ P I +
Sbjct: 84 YYWQQTEDDLTVTIRLPED-STKEDIQIQFLPDHINI 119
>AL356390-6|CAI13560.1| 133|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 133
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 568 NGADRENYSWAQTLMDLD 621
NGAD NY W QTL +LD
Sbjct: 116 NGADLPNYRWTQTLSELD 133
>AK027897-1|BAB55439.1| 583|Homo sapiens protein ( Homo sapiens
cDNA FLJ14991 fis, clone Y79AA1001781. ).
Length = 583
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 589 YSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGDIYV 699
Y W QT DL VT++LP D + +D+++ P I +
Sbjct: 278 YYWQQTEDDLTVTIRLPED-STKEDIQIQFLPDHINI 313
>AF521133-1|AAQ08823.1| 554|Homo sapiens tumor antigen CML66 short
form protein.
Length = 554
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 589 YSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGDIYV 699
Y W QT DL VT++LP D + +D+++ P I +
Sbjct: 249 YYWQQTEDDLTVTIRLPED-STKEDIQIQFLPDHINI 284
>AF390562-1|AAN40840.1| 1826|Homo sapiens TBP-associated factor RNA
polymerase 1-like protein.
Length = 1826
Score = 31.1 bits (67), Expect = 4.4
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 1445 DLQTLRENVRKCLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1504
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 1505 D-KLAR-LEKAINP 1516
>AF283302-1|AAM69373.1| 554|Homo sapiens chronic myelogenous
leukemia tumor antigen 66 short form protein.
Length = 554
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 589 YSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGDIYV 699
Y W QT DL VT++LP D + +D+++ P I +
Sbjct: 249 YYWQQTEDDLTVTIRLPED-STKEDIQIQFLPDHINI 284
>AF283301-1|AAK73017.1| 583|Homo sapiens chronic myelogenous
leukemia tumor antigen 66 protein.
Length = 583
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 589 YSWAQTLMDLDVTVKLPPDIKSSKDLKVAINPGDIYV 699
Y W QT DL VT++LP D + +D+++ P I +
Sbjct: 278 YYWQQTEDDLTVTIRLPED-STKEDIQIQFLPDHINI 313
>X07024-1|CAA30073.1| 1554|Homo sapiens CCG1 protein protein.
Length = 1554
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 1370 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1429
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 1430 D-KLAR-LEKAINP 1441
>D90359-1|BAA14374.1| 1872|Homo sapiens CCG1 protein protein.
Length = 1872
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 1426 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1485
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 1486 D-KLAR-LEKAINP 1497
>AY623109-1|AAT38105.1| 1893|Homo sapiens TAF1 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 250kD
protein.
Length = 1893
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 1447 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1506
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 1507 D-KLAR-LEKAINP 1518
>AM711895-1|CAM98558.1| 194|Homo sapiens dystonia 3 (with
Parkinsonism) protein.
Length = 194
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 140 D-KLAR-LEKAINP 151
>AM711894-1|CAM98557.1| 182|Homo sapiens dystonia 3 (with
Parkinsonism) protein.
Length = 182
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 140 D-KLAR-LEKAINP 151
>AM711893-1|CAM98556.1| 491|Homo sapiens dystonia 3 (with
Parkinsonism) protein.
Length = 491
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 140 D-KLAR-LEKAINP 151
>AM711892-1|CAM98555.1| 246|Homo sapiens dystonia 3 (with
Parkinsonism) protein.
Length = 246
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 140 D-KLAR-LEKAINP 151
>AJ555149-1|CAD87528.2| 246|Homo sapiens putative DYT3 protein
protein.
Length = 246
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 140 D-KLAR-LEKAINP 151
>AJ555148-1|CAD87527.2| 457|Homo sapiens putative DYT3 protein
protein.
Length = 457
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 140 D-KLAR-LEKAINP 151
>AJ549250-1|CAD70493.3| 455|Homo sapiens putative DYT3 protein
protein.
Length = 455
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 140 D-KLAR-LEKAINP 151
>AJ549248-1|CAD70491.3| 489|Homo sapiens putative DYT3 protein
protein.
Length = 489
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 140 D-KLAR-LEKAINP 151
>AB209316-1|BAD92553.1| 1070|Homo sapiens TBP-associated factor 1
isoform 2 variant protein.
Length = 1070
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 642
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 590 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 649
Query: 643 DIKSSKDLKVAINP 684
D K ++ L+ AINP
Sbjct: 650 D-KLAR-LEKAINP 661
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,935,331
Number of Sequences: 237096
Number of extensions: 2099905
Number of successful extensions: 6249
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 5963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6237
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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